| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944200
Identifier: 119944200
GI number: 119944200
Start: 531327
End: 532346
Strand: Reverse
Name: 119944200
Synonym: Ping_0421
Alternate gene names: NA
Gene position: 532346-531327 (Counterclockwise)
Preceding gene: 119944201
Following gene: 119944197
Centisome position: 11.68
GC content: 39.61
Gene sequence:
>1020_bases ATGAAAAATAACCAGATCCAGTTGCTGCTCAGCTTAGATTATGAGATTTTTTTCGGTAAAAATTGTGGTAGCGTTGAAAA GTGTATTTTTGATCCGACCCAACAATTATTAACGCTACTCAATAAATATGACTATAAGGTTAGTTTATTTGTTGATGCGG GGTTTCTGGTTAAACTAAAAAAGTATGCCGTTGATTTCCCTGTTTTAGAGCAGCAATACGCTGCCATTAAAAAGCAATTA CAAGCACTCTCATCACAAGGGCATGATATACAACTGCATATTCACCCGCACTGGGAGGATAGCTACTATGATGGCAATGC CTGGGTTATTAATACTGGCCGTTATCGCCTGCATGATTTTAGCCCGCAGGAAATTGATGACATAGTAACAAGTTATAAAC AAGAGCTCGAATCATGCAGTGAACAAAGTATATTCGCTTTTCGAGCTGGCGGCTGGTGTTTACAGCCCTTTGATAAAATC AAACAGGCACTGCAGAATAATAACATTTGGTTAGACAGCACCGTTTTTGCACAGGGACACTCCGATGATCCAACACGCTG GTTTGAGTTTAATCAGATACCTGCTAAAGCATATTGGCACTTTGATAATGATCCTCTAACGGCACAGCAAGACGGGTACT TTACGGAGATCCCTATCAGCGCAACTAAAACCTCACCTCTGTTTTTTTGGAAGCTTGCGCTGCGCAAAAAACTTTCCAGT CATCTATTTACCCCCTTTGGCGATGGGCAGGCGATGCTGGCCAGTCGAAGTTATTATATTGAACGTTTAACGAGAACAAC CTACGGGCCAGTTATGCTGGATAGTTCAAAAGCGGGGCAGCTGGAAAAAGCATTTAAAGAGCATCTAAAACTCGCAGATA AAAACAGCATTTTTAATGTAATGGGGCATCCAAAAAGTTTATCTCCCTACTCACTTATAAAATTAGAAGATTTTATAAGA AAACATAAAGAGTTAATTTCTATCACCTATCAAGACCTTAAGCATCTTAAAAATGCATAA
Upstream 100 bases:
>100_bases TATATATAAAAAACCTTCAATCTAAAGCTGGTCTACACTTATCCCGTTATATGAAATACGCCATCATTATCTATTTACCT GCTTAAATCGGAATAAATCA
Downstream 100 bases:
>100_bases ATATAAGTGATTTTTTAGTCACTTTAGATTTATCCGACAATAGAGCATCATGATATGGATGATCAAGAAAATAACATTAT GAACTTAACCTAATGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MKNNQIQLLLSLDYEIFFGKNCGSVEKCIFDPTQQLLTLLNKYDYKVSLFVDAGFLVKLKKYAVDFPVLEQQYAAIKKQL QALSSQGHDIQLHIHPHWEDSYYDGNAWVINTGRYRLHDFSPQEIDDIVTSYKQELESCSEQSIFAFRAGGWCLQPFDKI KQALQNNNIWLDSTVFAQGHSDDPTRWFEFNQIPAKAYWHFDNDPLTAQQDGYFTEIPISATKTSPLFFWKLALRKKLSS HLFTPFGDGQAMLASRSYYIERLTRTTYGPVMLDSSKAGQLEKAFKEHLKLADKNSIFNVMGHPKSLSPYSLIKLEDFIR KHKELISITYQDLKHLKNA
Sequences:
>Translated_339_residues MKNNQIQLLLSLDYEIFFGKNCGSVEKCIFDPTQQLLTLLNKYDYKVSLFVDAGFLVKLKKYAVDFPVLEQQYAAIKKQL QALSSQGHDIQLHIHPHWEDSYYDGNAWVINTGRYRLHDFSPQEIDDIVTSYKQELESCSEQSIFAFRAGGWCLQPFDKI KQALQNNNIWLDSTVFAQGHSDDPTRWFEFNQIPAKAYWHFDNDPLTAQQDGYFTEIPISATKTSPLFFWKLALRKKLSS HLFTPFGDGQAMLASRSYYIERLTRTTYGPVMLDSSKAGQLEKAFKEHLKLADKNSIFNVMGHPKSLSPYSLIKLEDFIR KHKELISITYQDLKHLKNA >Mature_339_residues MKNNQIQLLLSLDYEIFFGKNCGSVEKCIFDPTQQLLTLLNKYDYKVSLFVDAGFLVKLKKYAVDFPVLEQQYAAIKKQL QALSSQGHDIQLHIHPHWEDSYYDGNAWVINTGRYRLHDFSPQEIDDIVTSYKQELESCSEQSIFAFRAGGWCLQPFDKI KQALQNNNIWLDSTVFAQGHSDDPTRWFEFNQIPAKAYWHFDNDPLTAQQDGYFTEIPISATKTSPLFFWKLALRKKLSS HLFTPFGDGQAMLASRSYYIERLTRTTYGPVMLDSSKAGQLEKAFKEHLKLADKNSIFNVMGHPKSLSPYSLIKLEDFIR KHKELISITYQDLKHLKNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39260; Mature: 39260
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNQIQLLLSLDYEIFFGKNCGSVEKCIFDPTQQLLTLLNKYDYKVSLFVDAGFLVKLK CCCCEEEEEEEECEEEEECCCCCCHHHHHCCCHHHHHHHHHHCCCEEEEEECCCHHHHHH KYAVDFPVLEQQYAAIKKQLQALSSQGHDIQLHIHPHWEDSYYDGNAWVINTGRYRLHDF HHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCEEEEECCCEEEECC SPQEIDDIVTSYKQELESCSEQSIFAFRAGGWCLQPFDKIKQALQNNNIWLDSTVFAQGH CHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCHHHHHHHHHCCCEEEEEEEEECCC SDDPTRWFEFNQIPAKAYWHFDNDPLTAQQDGYFTEIPISATKTSPLFFWKLALRKKLSS CCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH HLFTPFGDGQAMLASRSYYIERLTRTTYGPVMLDSSKAGQLEKAFKEHLKLADKNSIFNV HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEE MGHPKSLSPYSLIKLEDFIRKHKELISITYQDLKHLKNA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNNQIQLLLSLDYEIFFGKNCGSVEKCIFDPTQQLLTLLNKYDYKVSLFVDAGFLVKLK CCCCEEEEEEEECEEEEECCCCCCHHHHHCCCHHHHHHHHHHCCCEEEEEECCCHHHHHH KYAVDFPVLEQQYAAIKKQLQALSSQGHDIQLHIHPHWEDSYYDGNAWVINTGRYRLHDF HHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCEEEEECCCEEEECC SPQEIDDIVTSYKQELESCSEQSIFAFRAGGWCLQPFDKIKQALQNNNIWLDSTVFAQGH CHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCHHHHHHHHHCCCEEEEEEEEECCC SDDPTRWFEFNQIPAKAYWHFDNDPLTAQQDGYFTEIPISATKTSPLFFWKLALRKKLSS CCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH HLFTPFGDGQAMLASRSYYIERLTRTTYGPVMLDSSKAGQLEKAFKEHLKLADKNSIFNV HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEE MGHPKSLSPYSLIKLEDFIRKHKELISITYQDLKHLKNA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA