| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944183
Identifier: 119944183
GI number: 119944183
Start: 510574
End: 511599
Strand: Direct
Name: 119944183
Synonym: Ping_0403
Alternate gene names: NA
Gene position: 510574-511599 (Clockwise)
Preceding gene: 119944182
Following gene: 119944184
Centisome position: 11.2
GC content: 40.16
Gene sequence:
>1026_bases ATGTTGAAATTTCTTTATGCATCATTAGTTACAATGACAAATAATTTTAATTACTTAGATTGGGCTGAGTTGACTGGCTT AATTAAGAACCCTCCACAGGCATCCTCTTTTTCTTTAAAAGAGATAAAAGCCCGCTGTGCAGTTATTGCTGCTCATGATG CAACAGATAAAACTAAGCAGACGGTTATGCTGCACAATAATTTCACCTTACTTCGCTTAGATTTAGATGACAGCCCATTT GATATCGCTGCGATCAAAGACTTATTGGACCAAGTGGATATTAAGTCATATATCGTCCATACAACTGCTAGTCACATGCA AGATGGTTGCAGCCATCGCTACCGTATCTACATAGAGTTAGTTGCGGCATTATCATTTGATATTTGGTCTTTGCTGGAAA AATATCTGTGTCATTTTTTTTCTGCCGATGACTGTTCAACAAGGCCGCAGCAAATCATGTATCTGCCCAGCTTATTCCCG GGTGTTATTTACGACAGCTATATCTCGGAGGGAAACGCTTTACAGGTTAATGGATCGTTACTGCTCGAGCAAGCCGTGAC TTTTAACAATATTTTAATGACTGATTATGCGCCAGTTGTTGAAGTTAAAAAGAAAAAGGTATTACCGCAATACTGCGAGT CATTAATAGCAGGGCAAGTGTCTATCATTGATTTGGTGAACCAGTCCTATACATGGGATTACGTGCTTGCACAGTATGGC TATAAACAACAAGGTCGCAGTTACTTGCCTCCAGAGTCAAAAAGCAAAATGGCAGGCGTGCATTTACTTAAAGGGAATGA TGGCCAACTCCGCTATTACTCTCACCACGCTAGTGATCCTTGTGCGACAGGAAAGTGCCTCGATATTTTTGAGTTTATTG TTGTGCGTGAATTTAATGGTGATGCGAAGAGGGCGGTAAAAGCCTTATCTAGCGCTTTTCCTGAACATAATAAGCACAAC CTAAAGCTGTATTTGAATGATCAACAACAGAAGCAAATTCAAGTTGTGATGGGGGACTTGAAATGA
Upstream 100 bases:
>100_bases AAAATAAACGTGCTTAGCAAAAGCTAAGCACATCACTTAACCACTGGTAGTTCGGCCTCGCCAAAGTTCAAACTACCAGT GCCTATAGGATACAACATTT
Downstream 100 bases:
>100_bases GACATTTACCTGAACCTAATCAGCCCTCAAATATCGACGGTGAATTGGAAAATGAAACATTAATTGATCGATTCCCTCAT TTTAAGTTAAACAATAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MLKFLYASLVTMTNNFNYLDWAELTGLIKNPPQASSFSLKEIKARCAVIAAHDATDKTKQTVMLHNNFTLLRLDLDDSPF DIAAIKDLLDQVDIKSYIVHTTASHMQDGCSHRYRIYIELVAALSFDIWSLLEKYLCHFFSADDCSTRPQQIMYLPSLFP GVIYDSYISEGNALQVNGSLLLEQAVTFNNILMTDYAPVVEVKKKKVLPQYCESLIAGQVSIIDLVNQSYTWDYVLAQYG YKQQGRSYLPPESKSKMAGVHLLKGNDGQLRYYSHHASDPCATGKCLDIFEFIVVREFNGDAKRAVKALSSAFPEHNKHN LKLYLNDQQQKQIQVVMGDLK
Sequences:
>Translated_341_residues MLKFLYASLVTMTNNFNYLDWAELTGLIKNPPQASSFSLKEIKARCAVIAAHDATDKTKQTVMLHNNFTLLRLDLDDSPF DIAAIKDLLDQVDIKSYIVHTTASHMQDGCSHRYRIYIELVAALSFDIWSLLEKYLCHFFSADDCSTRPQQIMYLPSLFP GVIYDSYISEGNALQVNGSLLLEQAVTFNNILMTDYAPVVEVKKKKVLPQYCESLIAGQVSIIDLVNQSYTWDYVLAQYG YKQQGRSYLPPESKSKMAGVHLLKGNDGQLRYYSHHASDPCATGKCLDIFEFIVVREFNGDAKRAVKALSSAFPEHNKHN LKLYLNDQQQKQIQVVMGDLK >Mature_341_residues MLKFLYASLVTMTNNFNYLDWAELTGLIKNPPQASSFSLKEIKARCAVIAAHDATDKTKQTVMLHNNFTLLRLDLDDSPF DIAAIKDLLDQVDIKSYIVHTTASHMQDGCSHRYRIYIELVAALSFDIWSLLEKYLCHFFSADDCSTRPQQIMYLPSLFP GVIYDSYISEGNALQVNGSLLLEQAVTFNNILMTDYAPVVEVKKKKVLPQYCESLIAGQVSIIDLVNQSYTWDYVLAQYG YKQQGRSYLPPESKSKMAGVHLLKGNDGQLRYYSHHASDPCATGKCLDIFEFIVVREFNGDAKRAVKALSSAFPEHNKHN LKLYLNDQQQKQIQVVMGDLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38662; Mature: 38662
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKFLYASLVTMTNNFNYLDWAELTGLIKNPPQASSFSLKEIKARCAVIAAHDATDKTKQ CHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHEEEEEECCCCCCCCE TVMLHNNFTLLRLDLDDSPFDIAAIKDLLDQVDIKSYIVHTTASHMQDGCSHRYRIYIEL EEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHEEHHHH VAALSFDIWSLLEKYLCHFFSADDCSTRPQQIMYLPSLFPGVIYDSYISEGNALQVNGSL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCHHHHHHHHHHHHCCCCEEEECCHH LLEQAVTFNNILMTDYAPVVEVKKKKVLPQYCESLIAGQVSIIDLVNQSYTWDYVLAQYG HHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHEEHHHCCCCCHHHHHHHCC YKQQGRSYLPPESKSKMAGVHLLKGNDGQLRYYSHHASDPCATGKCLDIFEFIVVREFNG HHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHEECCC DAKRAVKALSSAFPEHNKHNLKLYLNDQQQKQIQVVMGDLK HHHHHHHHHHHHCCCCCCCEEEEEECCCCHHEEHHEECCCC >Mature Secondary Structure MLKFLYASLVTMTNNFNYLDWAELTGLIKNPPQASSFSLKEIKARCAVIAAHDATDKTKQ CHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHEEEEEECCCCCCCCE TVMLHNNFTLLRLDLDDSPFDIAAIKDLLDQVDIKSYIVHTTASHMQDGCSHRYRIYIEL EEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHEEHHHH VAALSFDIWSLLEKYLCHFFSADDCSTRPQQIMYLPSLFPGVIYDSYISEGNALQVNGSL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCHHHHHHHHHHHHCCCCEEEECCHH LLEQAVTFNNILMTDYAPVVEVKKKKVLPQYCESLIAGQVSIIDLVNQSYTWDYVLAQYG HHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHEEHHHCCCCCHHHHHHHCC YKQQGRSYLPPESKSKMAGVHLLKGNDGQLRYYSHHASDPCATGKCLDIFEFIVVREFNG HHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHEECCC DAKRAVKALSSAFPEHNKHNLKLYLNDQQQKQIQVVMGDLK HHHHHHHHHHHHCCCCCCCEEEEEECCCCHHEEHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA