| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944182
Identifier: 119944182
GI number: 119944182
Start: 509817
End: 510254
Strand: Direct
Name: 119944182
Synonym: Ping_0402
Alternate gene names: NA
Gene position: 509817-510254 (Clockwise)
Preceding gene: 119944181
Following gene: 119944183
Centisome position: 11.18
GC content: 34.93
Gene sequence:
>438_bases ATGAAACATCTAAATAACACTAATACGGCATTTAATGTAGAAAAGTCGGCTTTACGGTTAATTGTTGCGCTTATCAATGA ACAACAAGAGATGGGAAATTTGGTCCAGAAGGTAGTTGAAAATGATTCAATTTCACTATTTTCAGGGCTTACTCCTCCTG ATTGTTGTAGCCAGTTAAACGGGGTTAATACCCAACAAGTCAATGCTTGGTTTGTTGAGAAAAATATTTTAATGAAAGTT GAGCGAGGTCATAAAGTGAAGGGTCATGCGCGAGATAAATATTTAAGGCAGAAATGCGATAAAAGCAAAGATGGGCTTCC TTATTATTACTCAATTTTAACCGTAAAAGGTGCTAAATATTTATATAAAGCTTACCTTGAAAACCGCTTACCCATGAAAA AAGACTGGGATGGACTTTTTACTTATATCGAATGTTAG
Upstream 100 bases:
>100_bases TATCGACTTGCTATAGGCAAGTTGGTAAACGCGGCTATGTTTGTTTGCCATTATTTGGCCTTTGGCTAGCAGGTCAATTG CCTGAACAAAGGAGTTAAAA
Downstream 100 bases:
>100_bases GAGCAATGGAAAGTTAAATATGGCAATGCGGCATAAAAAAATTGCTGAATTTTTCGAATCAACGGACAGAACAACCGTCA TATGCCTACTAATAATGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKHLNNTNTAFNVEKSALRLIVALINEQQEMGNLVQKVVENDSISLFSGLTPPDCCSQLNGVNTQQVNAWFVEKNILMKV ERGHKVKGHARDKYLRQKCDKSKDGLPYYYSILTVKGAKYLYKAYLENRLPMKKDWDGLFTYIEC
Sequences:
>Translated_145_residues MKHLNNTNTAFNVEKSALRLIVALINEQQEMGNLVQKVVENDSISLFSGLTPPDCCSQLNGVNTQQVNAWFVEKNILMKV ERGHKVKGHARDKYLRQKCDKSKDGLPYYYSILTVKGAKYLYKAYLENRLPMKKDWDGLFTYIEC >Mature_145_residues MKHLNNTNTAFNVEKSALRLIVALINEQQEMGNLVQKVVENDSISLFSGLTPPDCCSQLNGVNTQQVNAWFVEKNILMKV ERGHKVKGHARDKYLRQKCDKSKDGLPYYYSILTVKGAKYLYKAYLENRLPMKKDWDGLFTYIEC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16709; Mature: 16709
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLNNTNTAFNVEKSALRLIVALINEQQEMGNLVQKVVENDSISLFSGLTPPDCCSQLN CCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHC GVNTQQVNAWFVEKNILMKVERGHKVKGHARDKYLRQKCDKSKDGLPYYYSILTVKGAKY CCCCHHHHEEEECCHHEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHH LYKAYLENRLPMKKDWDGLFTYIEC HHHHHHHHCCCCCCCCCCCEEEECC >Mature Secondary Structure MKHLNNTNTAFNVEKSALRLIVALINEQQEMGNLVQKVVENDSISLFSGLTPPDCCSQLN CCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHC GVNTQQVNAWFVEKNILMKVERGHKVKGHARDKYLRQKCDKSKDGLPYYYSILTVKGAKY CCCCHHHHEEEECCHHEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHH LYKAYLENRLPMKKDWDGLFTYIEC HHHHHHHHCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA