| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is yheU [C]
Identifier: 119944169
GI number: 119944169
Start: 495244
End: 495471
Strand: Reverse
Name: yheU [C]
Synonym: Ping_0389
Alternate gene names: 119944169
Gene position: 495471-495244 (Counterclockwise)
Preceding gene: 119944173
Following gene: 119944168
Centisome position: 10.87
GC content: 42.98
Gene sequence:
>228_bases ATGCTTATACCCTATCAGGATCTAGATTCAGATACATTACATAGCTTAATCGAACATTTTGTCTTACGTGAGGGAACAGA CTACGGGGAACAAGAGGTCTCTTTAGCCGAGAAAACAGCGCAGGTCTTCAACTTATTAAAGCGCGGCAGCATTGTTATTC TCTACTCAGAACTTTCCGAGAGCGTGACCCTTATTCACAAGGAGCAACTCTCCCAACAACAGCAATAA
Upstream 100 bases:
>100_bases GTAAGATACATTACTTAACTTGACCAAATATTTTGCTATATGACCTGAGCGGTGAGGGAATAGACGACTGCGATCCGTAC AAGTAACTTAAGGAATATTT
Downstream 100 bases:
>100_bases ATAACTGATTAAAATTTAAGCGTTCTTATACTATAGCTATAATACAGAATAAATTAATACAAAATTAATTGGTTTTTTTG ACAAAGATCTGATTTCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MLIPYQDLDSDTLHSLIEHFVLREGTDYGEQEVSLAEKTAQVFNLLKRGSIVILYSELSESVTLIHKEQLSQQQQ
Sequences:
>Translated_75_residues MLIPYQDLDSDTLHSLIEHFVLREGTDYGEQEVSLAEKTAQVFNLLKRGSIVILYSELSESVTLIHKEQLSQQQQ >Mature_75_residues MLIPYQDLDSDTLHSLIEHFVLREGTDYGEQEVSLAEKTAQVFNLLKRGSIVILYSELSESVTLIHKEQLSQQQQ
Specific function: Unknown
COG id: COG3089
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0270 family [H]
Homologues:
Organism=Escherichia coli, GI1789753, Length=72, Percent_Identity=51.3888888888889, Blast_Score=77, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010648 - ProDom: PD026997 [H]
Pfam domain/function: PF06794 UPF0270 [H]
EC number: NA
Molecular weight: Translated: 8605; Mature: 8605
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIPYQDLDSDTLHSLIEHFVLREGTDYGEQEVSLAEKTAQVFNLLKRGSIVILYSELSE CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH SVTLIHKEQLSQQQQ HHHHHHHHHHHHCCC >Mature Secondary Structure MLIPYQDLDSDTLHSLIEHFVLREGTDYGEQEVSLAEKTAQVFNLLKRGSIVILYSELSE CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH SVTLIHKEQLSQQQQ HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA