| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yggX [C]
Identifier: 119944155
GI number: 119944155
Start: 481571
End: 481840
Strand: Reverse
Name: yggX [C]
Synonym: Ping_0375
Alternate gene names: 119944155
Gene position: 481840-481571 (Counterclockwise)
Preceding gene: 119944156
Following gene: 119944154
Centisome position: 10.57
GC content: 32.59
Gene sequence:
>270_bases ATGACTAGAACCGTATTTTGCAGTTATTTAAAAAAAGAAGCCCCTGGTTTAGCCTTTCAATTAATTCCAGGCGCTTTGGG TAAACGTATCTTTGACAATATTAGCCAGGAAGCCTGGTCAGAATGGCAAAAGAAACAAACAATGTTAATTAATGAAAAAA AATTAAAGTTAATGAACGCTGAAGACAGAAAAATTATTGAAGATGCAATGATTGGTTATCTTTTTGAAAATAAAGAAGTA GATATCGAAGGATATACGCCGGAAAAATAG
Upstream 100 bases:
>100_bases CTTTGGTATAACTTACACCACCCACAAAAAATTGGGTTAGCAGCAGCAACAACAAAAATTATAACCGCTGTTAACAAAAA CCTCTCAAAGGAGAAGATAG
Downstream 100 bases:
>100_bases TATCAAGATGTTGGCCACCCCGCAGATTAAGATTAACGCTGATGTTATTATTTTTAATCTTAATCGCAACAATGTTCACA AATAAAGCGGATAATGTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTRTVFCSYLKKEAPGLAFQLIPGALGKRIFDNISQEAWSEWQKKQTMLINEKKLKLMNAEDRKIIEDAMIGYLFENKEV DIEGYTPEK
Sequences:
>Translated_89_residues MTRTVFCSYLKKEAPGLAFQLIPGALGKRIFDNISQEAWSEWQKKQTMLINEKKLKLMNAEDRKIIEDAMIGYLFENKEV DIEGYTPEK >Mature_88_residues TRTVFCSYLKKEAPGLAFQLIPGALGKRIFDNISQEAWSEWQKKQTMLINEKKLKLMNAEDRKIIEDAMIGYLFENKEVD IEGYTPEK
Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes
COG id: COG2924
COG function: function code CO; Fe-S cluster protector protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fe(2+)-trafficking protein family
Homologues:
Organism=Escherichia coli, GI1789332, Length=88, Percent_Identity=65.9090909090909, Blast_Score=132, Evalue=3e-33,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): FETP_PSYIN (A1SRX1)
Other databases:
- EMBL: CP000510 - RefSeq: YP_941835.1 - ProteinModelPortal: A1SRX1 - SMR: A1SRX1 - STRING: A1SRX1 - GeneID: 4624181 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0375 - eggNOG: COG2924 - HOGENOM: HBG289800 - OMA: SKQTMLI - PhylomeDB: A1SRX1 - ProtClustDB: PRK05408 - BioCyc: PING357804:PING_0375-MONOMER - HAMAP: MF_00686 - InterPro: IPR007457 - PIRSF: PIRSF029827 - ProDom: PD029191
Pfam domain/function: PF04362 Iron_traffic; SSF111148 Fe_traffick_prot_YggX
EC number: NA
Molecular weight: Translated: 10373; Mature: 10242
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTVFCSYLKKEAPGLAFQLIPGALGKRIFDNISQEAWSEWQKKQTMLINEKKLKLMNA CCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECC EDRKIIEDAMIGYLFENKEVDIEGYTPEK CHHHHHHHHHHHHHHCCCEEEECCCCCCC >Mature Secondary Structure TRTVFCSYLKKEAPGLAFQLIPGALGKRIFDNISQEAWSEWQKKQTMLINEKKLKLMNA CHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECC EDRKIIEDAMIGYLFENKEVDIEGYTPEK CHHHHHHHHHHHHHHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA