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The map label for this gene is selD [H]

Identifier: 119944069

GI number: 119944069

Start: 370730

End: 371785

Strand: Direct

Name: selD [H]

Synonym: Ping_0284

Alternate gene names: 119944069

Gene position: 370730-371785 (Clockwise)

Preceding gene: 119944063

Following gene: 119944070

Centisome position: 8.13

GC content: 45.17

Gene sequence:

>1056_bases
ATGTCAGCAGATTATGAACATACCAATGTACGTCTAACCCAGTACAGCCACGGTGCCGGTTGCGGATGTAAAATCTCCCC
AAAAGTCTTAGATAGTATTCTGGTATCAGCACTTCCTGCCTTCCAGGATCCCAATCTATTAGTGGGCAATGAAAATAAAG
ATGATGCCGCTGTTTATGATCTTGGCAACGGTAGTTGTATTATCAGTACCACAGACTTTTTTATGCCTATTGTTGATGAT
CCTTTTGATTTTGGCCGCATTGCAGCGACTAATGCGATCAGCGATATTTATGCGATGGGCGGTAAACCCATTATGGCCAT
TGCTATTCTCGGCTGGCCGATCAACAAATTGGCTCCCGGCATAGCGGCCCAGGTGATTGACGGTGGTCGTTCGGTTTGCC
ATGAAGCCGGGATTGTATTAGCGGGTGGGCACAGTATTGATGCGCCCGAGCCTATTTTCGGATTGGCCGTTACCGGCATA
GTACCGACCGACAAAGTGAAAAAAAATAGCCAGGCTAAAGAAGGTGATTTGCTGTTTTTGTCTAAACCTATTGGTATCGG
CATTTTAACCACAGCAGAAAAAAAGGGCTTGCTGCAGGCGGCCCATAAAAATTTGGCGCGCGATACTATGTGTGAGCTTA
ATAAAATCGGAGCGGAGTTTGCGCATATAGAGGGTGTCAATGCGATGACCGACGTAACCGGTTTTGGTTTGTTGGGGCAT
TTATCGGAAATTTGCGAAGGTAGCGGTTTGTCTGCATCTCTTGATTTTGCGGCTATTCCCACCTTAGATGCCATTGAATA
TTATGTCGAGCAAGGTTGTGTACCCGGTGGTTCAATGCGTAATTTTGACAGTTACGGCCATAAAGTGACACCCCTTAGTG
AACTGCAAAAAACTATTTTATGCGATCCGCAAACATCGGGTGGCCTGCTTATTTCTGTTTCACCGTCGAGCGCTGACATA
TTGCTTACAACCGCCAAAAACAGTGGTGTAAAGTTATTTCAGATTGGAAAAATAGAGTCAAAAAACGCTCAGCAACCCGT
TATTTCAGTGTTATAA

Upstream 100 bases:

>100_bases
GAAGTATCATGGGTATAAAAGCATAAAAAGTATTAACTAAGCTTTTCCCTGCCACATACTTAAGTTTAATTTTATTCAAG
AATCAGTGAGAGATAATAAA

Downstream 100 bases:

>100_bases
AATGAGTGAATTAAAAATGCAACAAAGCGACCTTCAAGAGCAACAATTATACCGCTCGTTATTTTTGTTAAAGACCCCGC
TGATTGACCTTAGGGCGCCC

Product: selenophosphate synthase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSADYEHTNVRLTQYSHGAGCGCKISPKVLDSILVSALPAFQDPNLLVGNENKDDAAVYDLGNGSCIISTTDFFMPIVDD
PFDFGRIAATNAISDIYAMGGKPIMAIAILGWPINKLAPGIAAQVIDGGRSVCHEAGIVLAGGHSIDAPEPIFGLAVTGI
VPTDKVKKNSQAKEGDLLFLSKPIGIGILTTAEKKGLLQAAHKNLARDTMCELNKIGAEFAHIEGVNAMTDVTGFGLLGH
LSEICEGSGLSASLDFAAIPTLDAIEYYVEQGCVPGGSMRNFDSYGHKVTPLSELQKTILCDPQTSGGLLISVSPSSADI
LLTTAKNSGVKLFQIGKIESKNAQQPVISVL

Sequences:

>Translated_351_residues
MSADYEHTNVRLTQYSHGAGCGCKISPKVLDSILVSALPAFQDPNLLVGNENKDDAAVYDLGNGSCIISTTDFFMPIVDD
PFDFGRIAATNAISDIYAMGGKPIMAIAILGWPINKLAPGIAAQVIDGGRSVCHEAGIVLAGGHSIDAPEPIFGLAVTGI
VPTDKVKKNSQAKEGDLLFLSKPIGIGILTTAEKKGLLQAAHKNLARDTMCELNKIGAEFAHIEGVNAMTDVTGFGLLGH
LSEICEGSGLSASLDFAAIPTLDAIEYYVEQGCVPGGSMRNFDSYGHKVTPLSELQKTILCDPQTSGGLLISVSPSSADI
LLTTAKNSGVKLFQIGKIESKNAQQPVISVL
>Mature_350_residues
SADYEHTNVRLTQYSHGAGCGCKISPKVLDSILVSALPAFQDPNLLVGNENKDDAAVYDLGNGSCIISTTDFFMPIVDDP
FDFGRIAATNAISDIYAMGGKPIMAIAILGWPINKLAPGIAAQVIDGGRSVCHEAGIVLAGGHSIDAPEPIFGLAVTGIV
PTDKVKKNSQAKEGDLLFLSKPIGIGILTTAEKKGLLQAAHKNLARDTMCELNKIGAEFAHIEGVNAMTDVTGFGLLGHL
SEICEGSGLSASLDFAAIPTLDAIEYYVEQGCVPGGSMRNFDSYGHKVTPLSELQKTILCDPQTSGGLLISVSPSSADIL
LTTAKNSGVKLFQIGKIESKNAQQPVISVL

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=377, Percent_Identity=28.1167108753316, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI15011844, Length=388, Percent_Identity=26.2886597938144, Blast_Score=98, Evalue=1e-20,
Organism=Escherichia coli, GI1788062, Length=344, Percent_Identity=64.8255813953488, Blast_Score=470, Evalue=1e-134,
Organism=Caenorhabditis elegans, GI17543426, Length=366, Percent_Identity=27.5956284153005, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24653602, Length=374, Percent_Identity=29.144385026738, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI24653604, Length=374, Percent_Identity=29.144385026738, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI28574119, Length=386, Percent_Identity=26.9430051813472, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28574118, Length=281, Percent_Identity=28.1138790035587, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 36771; Mature: 36639

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADYEHTNVRLTQYSHGAGCGCKISPKVLDSILVSALPAFQDPNLLVGNENKDDAAVYD
CCCCCCCCEEEEEEECCCCCCCCEECHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEEE
LGNGSCIISTTDFFMPIVDDPFDFGRIAATNAISDIYAMGGKPIMAIAILGWPINKLAPG
CCCCEEEEEEHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCC
IAAQVIDGGRSVCHEAGIVLAGGHSIDAPEPIFGLAVTGIVPTDKVKKNSQAKEGDLLFL
HHHHHHHCCHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCEEEE
SKPIGIGILTTAEKKGLLQAAHKNLARDTMCELNKIGAEFAHIEGVNAMTDVTGFGLLGH
ECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHH
LSEICEGSGLSASLDFAAIPTLDAIEYYVEQGCVPGGSMRNFDSYGHKVTPLSELQKTIL
HHHHHCCCCCCEECCEEECCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHEE
CDPQTSGGLLISVSPSSADILLTTAKNSGVKLFQIGKIESKNAQQPVISVL
CCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCHHHCC
>Mature Secondary Structure 
SADYEHTNVRLTQYSHGAGCGCKISPKVLDSILVSALPAFQDPNLLVGNENKDDAAVYD
CCCCCCCEEEEEEECCCCCCCCEECHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEEE
LGNGSCIISTTDFFMPIVDDPFDFGRIAATNAISDIYAMGGKPIMAIAILGWPINKLAPG
CCCCEEEEEEHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCC
IAAQVIDGGRSVCHEAGIVLAGGHSIDAPEPIFGLAVTGIVPTDKVKKNSQAKEGDLLFL
HHHHHHHCCHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCEEEE
SKPIGIGILTTAEKKGLLQAAHKNLARDTMCELNKIGAEFAHIEGVNAMTDVTGFGLLGH
ECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHH
LSEICEGSGLSASLDFAAIPTLDAIEYYVEQGCVPGGSMRNFDSYGHKVTPLSELQKTIL
HHHHHCCCCCCEECCEEECCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHEE
CDPQTSGGLLISVSPSSADILLTTAKNSGVKLFQIGKIESKNAQQPVISVL
CCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]