Click here to switch to the map view.

The map label for this gene is yrfG [H]

Identifier: 119943938

GI number: 119943938

Start: 197542

End: 198213

Strand: Reverse

Name: yrfG [H]

Synonym: Ping_0151

Alternate gene names: 119943938

Gene position: 198213-197542 (Counterclockwise)

Preceding gene: 119943939

Following gene: 119943934

Centisome position: 4.35

GC content: 35.86

Gene sequence:

>672_bases
ATGGAATTAAATTGGAATAACATTAAAACAGTGTTGCTAGACATGGATGGAACATTGCTTGATCTTAACTTTGACTCATT
TTTTTGGCGTGAGCACTTACCTATGCGCTACGCAGAATATCATAATCTTACACTGGTTCAGGCAAAGTCATATTTAAAAA
ATGAAACCAATAATGTAGCAGGGAAAATAGAATGGTACTGCCTAGATTACTGGGAAGAAAAGCTAAGTTTGCCTATTACT
GACTTAAAGAGGGAAATTGAAGATAAAATATCATTACGACCTGATACAATTCCATTTTTAGATGCACTAAAAGCAGCTAA
AAAAGAGGTTGTATTAGTGACTAACGCACACCCTAATAGCCTCTCACTGAAAGTAGAAAAAACCGCATTAGATAGCCATA
TTGACCGCCTAATATCTACTCATCAATATGGTGTAACAAAAGAATCTCAAACTCTTTGGAAGAAACTACAAGCTGATCTT
AATTTTGATAGTGAAAGCACCTTATTTGTAGATGATAGTTTAACCATTTTAGACAGCGCTAAGAGTTTCGGTATTAAGTA
CCTCCTTGCAGTTGCAAATCCAGACTCTCAACGCCCCCCCCTGCAAAAAGAACAACTAAAAGGCTACCCATTTATTACTG
ATTATCGTCATATTCTGGCTGATATTAGATAG

Upstream 100 bases:

>100_bases
GAGCAAGCTAGGGTTGATATAGTAACAAAAGAAAAGAGTTAATATTCAAAAGCTTATTTTAATTTATAATTAATTACTTG
TAATGACTATGGAATAAAAG

Downstream 100 bases:

>100_bases
CAGTAGTTTTACATAATCATTTTCTATTATTGAAGGTTCTAAAATTATTAACTTATCCCCGTCCAATATTAAATTGGTAT
GGCACTGGTGGTGCTAATAT

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MELNWNNIKTVLLDMDGTLLDLNFDSFFWREHLPMRYAEYHNLTLVQAKSYLKNETNNVAGKIEWYCLDYWEEKLSLPIT
DLKREIEDKISLRPDTIPFLDALKAAKKEVVLVTNAHPNSLSLKVEKTALDSHIDRLISTHQYGVTKESQTLWKKLQADL
NFDSESTLFVDDSLTILDSAKSFGIKYLLAVANPDSQRPPLQKEQLKGYPFITDYRHILADIR

Sequences:

>Translated_223_residues
MELNWNNIKTVLLDMDGTLLDLNFDSFFWREHLPMRYAEYHNLTLVQAKSYLKNETNNVAGKIEWYCLDYWEEKLSLPIT
DLKREIEDKISLRPDTIPFLDALKAAKKEVVLVTNAHPNSLSLKVEKTALDSHIDRLISTHQYGVTKESQTLWKKLQADL
NFDSESTLFVDDSLTILDSAKSFGIKYLLAVANPDSQRPPLQKEQLKGYPFITDYRHILADIR
>Mature_223_residues
MELNWNNIKTVLLDMDGTLLDLNFDSFFWREHLPMRYAEYHNLTLVQAKSYLKNETNNVAGKIEWYCLDYWEEKLSLPIT
DLKREIEDKISLRPDTIPFLDALKAAKKEVVLVTNAHPNSLSLKVEKTALDSHIDRLISTHQYGVTKESQTLWKKLQADL
NFDSESTLFVDDSLTILDSAKSFGIKYLLAVANPDSQRPPLQKEQLKGYPFITDYRHILADIR

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082259, Length=222, Percent_Identity=44.1441441441441, Blast_Score=213, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 25862; Mature: 25862

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELNWNNIKTVLLDMDGTLLDLNFDSFFWREHLPMRYAEYHNLTLVQAKSYLKNETNNVA
CCCCCCCEEEEEEECCCEEEEECCCHHHHHHCCCCHHHHHCCEEEEEHHHHHHCCCCCCC
GKIEWYCLDYWEEKLSLPITDLKREIEDKISLRPDTIPFLDALKAAKKEVVLVTNAHPNS
EEEEEEEEEEHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCC
LSLKVEKTALDSHIDRLISTHQYGVTKESQTLWKKLQADLNFDSESTLFVDDSLTILDSA
EEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCEEEEHHH
KSFGIKYLLAVANPDSQRPPLQKEQLKGYPFITDYRHILADIR
HHCCEEEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MELNWNNIKTVLLDMDGTLLDLNFDSFFWREHLPMRYAEYHNLTLVQAKSYLKNETNNVA
CCCCCCCEEEEEEECCCEEEEECCCHHHHHHCCCCHHHHHCCEEEEEHHHHHHCCCCCCC
GKIEWYCLDYWEEKLSLPITDLKREIEDKISLRPDTIPFLDALKAAKKEVVLVTNAHPNS
EEEEEEEEEEHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCC
LSLKVEKTALDSHIDRLISTHQYGVTKESQTLWKKLQADLNFDSESTLFVDDSLTILDSA
EEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCEEEEHHH
KSFGIKYLLAVANPDSQRPPLQKEQLKGYPFITDYRHILADIR
HHCCEEEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]