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The map label for this gene is rseB [H]

Identifier: 119943860

GI number: 119943860

Start: 89413

End: 90420

Strand: Direct

Name: rseB [H]

Synonym: Ping_0067

Alternate gene names: 119943860

Gene position: 89413-90420 (Clockwise)

Preceding gene: 119943859

Following gene: 119943861

Centisome position: 1.96

GC content: 33.33

Gene sequence:

>1008_bases
ATGAAACTGCTCTTCTATTCTAAAACATTAATTACGGCTGTGTTCATATTAATTGCTGGTGCCGCATTTTCTGTTCAAGC
AACAGAGATGAGTAACGATCAAACAGTCAAAAAAGATAATATAACGGCCATTGAATACTTGCAGCTTATGCAAACAGCCT
ATAAAAATTTAAATTATGAAATATTATATTTAAATAACCTAAAAAATACAGTTGAACCGAAACAACTACTCCATGGTGTT
ATTAACCAGGAAGAAATTGCTTATTTTCGTTATTTAAACGGTGCAATGCGTGAGTCTTTACAATATTTGCAAAAAATAAG
TTATTTCGAACAAGGCTCACAACCCTACACGTTACAATCTACTCGCAACCAAAGTGTTTTTGCGAATATTGCTAATTTTA
ATTATGACAAGGGGTTAGACTCATACGAGTATATTATTTTAGGAAAAGGGCGTATTGCGGGTAAAACTGCCATGGCAATA
CGGATGATAAGTAAAGATCAATATCGTTATAGTTATATTGTTTGGATAGATCTTGATACCCATTTGCCATTACGCTTAGA
TACGATTAATAGTTCAAATATTATTCTCGACCAGATAATGGTTGTTTCATTAAAGGTCAGTGAGCAAGTTAACCCATGGT
TAGAAAGTTTAAGTAATCAAAAACTGCCTGAATTATTCCATTTATCGCAAACATCTAATCTTCAAGCATCTTTATGGAAA
GTCGATTGGTTGCCTGCTGGTTTCAACATTGTGAAAGATGATCAACATAAATTAGTGATGTATGAAAACGAGCCTGTTTC
CTACATAATGTTAAATGATGGTATTGTTTCTGTTTCTGTTTATATCTCAGCTAAAAAAACAACATCAGAGCAACAGCAAA
AAACAATTCAACGCGGCGCAACGGTTTTATATACCGATCAAAAAAACAATTTCGAGATTAATGTGATTGGTGAAATACCA
GTTGCCACTGCCAAGCGTTTAATAGAGTCAATTTCAATAGTGGAATAA

Upstream 100 bases:

>100_bases
CTAAGGTAGTGCTATTGAATACTTGCAGCTTATGTAAATGACATATAAAAATTTAATTAACCTAAAACATACAGCTGTAA
ACACAATCTTAAGGTAAATA

Downstream 100 bases:

>100_bases
AAAATGGTAGCTGAAAAAGGGAAAATAATAGCAATAGAAAAAAGTGAGGGTAAAACCCTTGCTCATATTGAATACATTTC
AAAATCAGCTTGCTCCTCAT

Product: sigma E regulatory protein, MucB/RseB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MKLLFYSKTLITAVFILIAGAAFSVQATEMSNDQTVKKDNITAIEYLQLMQTAYKNLNYEILYLNNLKNTVEPKQLLHGV
INQEEIAYFRYLNGAMRESLQYLQKISYFEQGSQPYTLQSTRNQSVFANIANFNYDKGLDSYEYIILGKGRIAGKTAMAI
RMISKDQYRYSYIVWIDLDTHLPLRLDTINSSNIILDQIMVVSLKVSEQVNPWLESLSNQKLPELFHLSQTSNLQASLWK
VDWLPAGFNIVKDDQHKLVMYENEPVSYIMLNDGIVSVSVYISAKKTTSEQQQKTIQRGATVLYTDQKNNFEINVIGEIP
VATAKRLIESISIVE

Sequences:

>Translated_335_residues
MKLLFYSKTLITAVFILIAGAAFSVQATEMSNDQTVKKDNITAIEYLQLMQTAYKNLNYEILYLNNLKNTVEPKQLLHGV
INQEEIAYFRYLNGAMRESLQYLQKISYFEQGSQPYTLQSTRNQSVFANIANFNYDKGLDSYEYIILGKGRIAGKTAMAI
RMISKDQYRYSYIVWIDLDTHLPLRLDTINSSNIILDQIMVVSLKVSEQVNPWLESLSNQKLPELFHLSQTSNLQASLWK
VDWLPAGFNIVKDDQHKLVMYENEPVSYIMLNDGIVSVSVYISAKKTTSEQQQKTIQRGATVLYTDQKNNFEINVIGEIP
VATAKRLIESISIVE
>Mature_335_residues
MKLLFYSKTLITAVFILIAGAAFSVQATEMSNDQTVKKDNITAIEYLQLMQTAYKNLNYEILYLNNLKNTVEPKQLLHGV
INQEEIAYFRYLNGAMRESLQYLQKISYFEQGSQPYTLQSTRNQSVFANIANFNYDKGLDSYEYIILGKGRIAGKTAMAI
RMISKDQYRYSYIVWIDLDTHLPLRLDTINSSNIILDQIMVVSLKVSEQVNPWLESLSNQKLPELFHLSQTSNLQASLWK
VDWLPAGFNIVKDDQHKLVMYENEPVSYIMLNDGIVSVSVYISAKKTTSEQQQKTIQRGATVLYTDQKNNFEINVIGEIP
VATAKRLIESISIVE

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=331, Percent_Identity=29.0030211480363, Blast_Score=167, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 38363; Mature: 38363

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLFYSKTLITAVFILIAGAAFSVQATEMSNDQTVKKDNITAIEYLQLMQTAYKNLNYE
CEEEEEHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCCEE
ILYLNNLKNTVEPKQLLHGVINQEEIAYFRYLNGAMRESLQYLQKISYFEQGSQPYTLQS
EEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
TRNQSVFANIANFNYDKGLDSYEYIILGKGRIAGKTAMAIRMISKDQYRYSYIVWIDLDT
CCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEEEECC
HLPLRLDTINSSNIILDQIMVVSLKVSEQVNPWLESLSNQKLPELFHLSQTSNLQASLWK
CCCEEEEECCCCCEEEEEEEEEEEEHHHHCCHHHHHHCCCCCCHHHCCCCCCCCEEEEEE
VDWLPAGFNIVKDDQHKLVMYENEPVSYIMLNDGIVSVSVYISAKKTTSEQQQKTIQRGA
EEEECCCCEEEECCCCEEEEECCCCEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHCC
TVLYTDQKNNFEINVIGEIPVATAKRLIESISIVE
EEEEECCCCCEEEEEEECCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLLFYSKTLITAVFILIAGAAFSVQATEMSNDQTVKKDNITAIEYLQLMQTAYKNLNYE
CEEEEEHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCCEE
ILYLNNLKNTVEPKQLLHGVINQEEIAYFRYLNGAMRESLQYLQKISYFEQGSQPYTLQS
EEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
TRNQSVFANIANFNYDKGLDSYEYIILGKGRIAGKTAMAIRMISKDQYRYSYIVWIDLDT
CCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEEEECC
HLPLRLDTINSSNIILDQIMVVSLKVSEQVNPWLESLSNQKLPELFHLSQTSNLQASLWK
CCCEEEEECCCCCEEEEEEEEEEEEHHHHCCHHHHHHCCCCCCHHHCCCCCCCCEEEEEE
VDWLPAGFNIVKDDQHKLVMYENEPVSYIMLNDGIVSVSVYISAKKTTSEQQQKTIQRGA
EEEECCCCEEEECCCCEEEEECCCCEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHCC
TVLYTDQKNNFEINVIGEIPVATAKRLIESISIVE
EEEEECCCCCEEEEEEECCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]