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The map label for this gene is rseA [H]

Identifier: 119943859

GI number: 119943859

Start: 88695

End: 89228

Strand: Direct

Name: rseA [H]

Synonym: Ping_0066

Alternate gene names: 119943859

Gene position: 88695-89228 (Clockwise)

Preceding gene: 119943858

Following gene: 119943860

Centisome position: 1.95

GC content: 36.7

Gene sequence:

>534_bases
ATGAAAGATGTGAATGAACAACTGTCAGCGATTGTTGATAATGAATTTATTGATGAGAAGTTAATTGATGAACTACTGAT
TAATAAAGATAAACAGGAGCTATTTTCTCGTTATCATTTAATTGGTGATGTGATGCGTGGAGATATTACGGATCAATTCA
TTAATTTTGATATTAGTCAGCAAGTAATGGCTAAGATAGAACAGCCCACTAAAATAGCTGCTGTTGTGGAGCTTGATACT
CCCACAGAAAAAAGTAAAAATAATGTTATCTCTTTTGTTAAACGTTTTGGACAATACGCGATCGCCGCATCTGTTGCAGG
GGTAGTGGTGTTAGCAAGCCTTGTTACTTCTGAACCAACCTTTCAAAATAACAGTGCCGGGCTTGAAGTGTTAAAAACGG
TGCCTCTGGGCGCTGCAAATCCGGTCAGTTTGCAAACAACTAAAAAACAATCGCAACAGGAAGTTAAAAAACATAATGAC
CGATTAGAAGCATTATTAAATGATCATCAATTACAGCTGCAAACACAACCCTAA

Upstream 100 bases:

>100_bases
TTGTCCTATCGGCACAGTTCGATCTCGTATTTTTAGAGCTCGTGAAATGATAGATAAGCATCTGAAACCTCTATTAGCAG
AAGATTAATTGGGAAGCAAA

Downstream 100 bases:

>100_bases
GGTAGTGCTATTGAATACTTGTAGCTTATGTAAATGACATATAAAAATTTAAATAACCTAAAAAATACAGCTGCAAACAC
AACCCTAAGGTAGTGCTATT

Product: anti sigma-E protein, RseA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKDVNEQLSAIVDNEFIDEKLIDELLINKDKQELFSRYHLIGDVMRGDITDQFINFDISQQVMAKIEQPTKIAAVVELDT
PTEKSKNNVISFVKRFGQYAIAASVAGVVVLASLVTSEPTFQNNSAGLEVLKTVPLGAANPVSLQTTKKQSQQEVKKHND
RLEALLNDHQLQLQTQP

Sequences:

>Translated_177_residues
MKDVNEQLSAIVDNEFIDEKLIDELLINKDKQELFSRYHLIGDVMRGDITDQFINFDISQQVMAKIEQPTKIAAVVELDT
PTEKSKNNVISFVKRFGQYAIAASVAGVVVLASLVTSEPTFQNNSAGLEVLKTVPLGAANPVSLQTTKKQSQQEVKKHND
RLEALLNDHQLQLQTQP
>Mature_177_residues
MKDVNEQLSAIVDNEFIDEKLIDELLINKDKQELFSRYHLIGDVMRGDITDQFINFDISQQVMAKIEQPTKIAAVVELDT
PTEKSKNNVISFVKRFGQYAIAASVAGVVVLASLVTSEPTFQNNSAGLEVLKTVPLGAANPVSLQTTKKQSQQEVKKHND
RLEALLNDHQLQLQTQP

Specific function: Negative regulator of rpoE [H]

COG id: COG3073

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseA family [H]

Homologues:

Organism=Escherichia coli, GI1788925, Length=184, Percent_Identity=33.695652173913, Blast_Score=77, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005573
- InterPro:   IPR005572 [H]

Pfam domain/function: PF03873 RseA_C; PF03872 RseA_N [H]

EC number: NA

Molecular weight: Translated: 19733; Mature: 19733

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVNEQLSAIVDNEFIDEKLIDELLINKDKQELFSRYHLIGDVMRGDITDQFINFDISQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCHHH
QVMAKIEQPTKIAAVVELDTPTEKSKNNVISFVKRFGQYAIAASVAGVVVLASLVTSEPT
HHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FQNNSAGLEVLKTVPLGAANPVSLQTTKKQSQQEVKKHNDRLEALLNDHQLQLQTQP
CCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
>Mature Secondary Structure
MKDVNEQLSAIVDNEFIDEKLIDELLINKDKQELFSRYHLIGDVMRGDITDQFINFDISQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCHHH
QVMAKIEQPTKIAAVVELDTPTEKSKNNVISFVKRFGQYAIAASVAGVVVLASLVTSEPT
HHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FQNNSAGLEVLKTVPLGAANPVSLQTTKKQSQQEVKKHNDRLEALLNDHQLQLQTQP
CCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]