| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119943826
Identifier: 119943826
GI number: 119943826
Start: 48493
End: 48903
Strand: Direct
Name: 119943826
Synonym: Ping_0032
Alternate gene names: NA
Gene position: 48493-48903 (Clockwise)
Preceding gene: 119943825
Following gene: 119943827
Centisome position: 1.06
GC content: 44.77
Gene sequence:
>411_bases ATGTTTGCAAAAACTCAAATGGGCGGACTGGACTTTGCCATGCCTGATGTATGTTTAACGCCGATTCCATCACCCGTGGG CCCTATTCCTGTTCCTATTCCCTACCCGAATATTTCAATACCCATGATGGCAATTCCTACTCAGTTTAAAGTATTGACCG TTTGTATGCCGAATCATAATTTAATGACGATGACCCCTATGTCAAATGGGGATAATAGTGGCCTGATGATGAATCCATTA TCAGCCATGGTAATGGGGCCCAGTAGAAATTTAATCGGCAGTTTTAAAACCTTTATAGGCGGTATGCCGGCAACCACTAT GCTTAAACCTACGGGACAAAATGGTGTTAGCCCGGGTGCCTTTGGCATGAGTTTAGCGCCTAGCCAGGTCAAACTTCTGA TTATGGCGTAG
Upstream 100 bases:
>100_bases TTAAAGGCACCTTGAATTCCCGCGCAAAAAATCAGGTGATCACCGCCAAAGGTGATATAAAAGTCGATGCCGAACGCATC CATATGGGGTAGGACAGTTT
Downstream 100 bases:
>100_bases TCCGTCATGTTCGTCATAATATTTAATAACAGTACGGAAGGACTTAATAAATGAAAACCTCTTTTGGGATAAAATTTGGC ATATTGATGCTGTTTGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MFAKTQMGGLDFAMPDVCLTPIPSPVGPIPVPIPYPNISIPMMAIPTQFKVLTVCMPNHNLMTMTPMSNGDNSGLMMNPL SAMVMGPSRNLIGSFKTFIGGMPATTMLKPTGQNGVSPGAFGMSLAPSQVKLLIMA
Sequences:
>Translated_136_residues MFAKTQMGGLDFAMPDVCLTPIPSPVGPIPVPIPYPNISIPMMAIPTQFKVLTVCMPNHNLMTMTPMSNGDNSGLMMNPL SAMVMGPSRNLIGSFKTFIGGMPATTMLKPTGQNGVSPGAFGMSLAPSQVKLLIMA >Mature_136_residues MFAKTQMGGLDFAMPDVCLTPIPSPVGPIPVPIPYPNISIPMMAIPTQFKVLTVCMPNHNLMTMTPMSNGDNSGLMMNPL SAMVMGPSRNLIGSFKTFIGGMPATTMLKPTGQNGVSPGAFGMSLAPSQVKLLIMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14300; Mature: 14300
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 12.5 %Met (Translated Protein) 14.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 12.5 %Met (Mature Protein) 14.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAKTQMGGLDFAMPDVCLTPIPSPVGPIPVPIPYPNISIPMMAIPTQFKVLTVCMPNHN CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCC LMTMTPMSNGDNSGLMMNPLSAMVMGPSRNLIGSFKTFIGGMPATTMLKPTGQNGVSPGA EEEECCCCCCCCCCEEECCCEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCC FGMSLAPSQVKLLIMA CCCEECCCEEEEEEEC >Mature Secondary Structure MFAKTQMGGLDFAMPDVCLTPIPSPVGPIPVPIPYPNISIPMMAIPTQFKVLTVCMPNHN CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCC LMTMTPMSNGDNSGLMMNPLSAMVMGPSRNLIGSFKTFIGGMPATTMLKPTGQNGVSPGA EEEECCCCCCCCCCEEECCCEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCC FGMSLAPSQVKLLIMA CCCEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA