| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119943825
Identifier: 119943825
GI number: 119943825
Start: 47840
End: 48484
Strand: Direct
Name: 119943825
Synonym: Ping_0031
Alternate gene names: NA
Gene position: 47840-48484 (Clockwise)
Preceding gene: 119943824
Following gene: 119943826
Centisome position: 1.05
GC content: 41.55
Gene sequence:
>645_bases ATGCTTAATAATGTTATTTCAATGCATTCACCGACAACAGCTTCTCTGTTTTCCGGTCATGTGAAAAAAGAAGTAAAAGA TGTGTTTATTGTGCAATCGGAGAGTGGTGTTTTTCCGGCTAAGCATGCCGCAAGCTGTTTGCTGCAACCCGAGGTGGATG ACAAAGTATTGCTGAGTATGACCGATGGTGAGCTGTATATTCTTGCTATATTAGAAAAGTCATCACAGAAAAGTAAGCTT AAATTTAAAGGGGATGTCTGCTTGGAAAGTGATGCTGGCCTCTCGTTAAGCAGTGCTAAAGCGCTGCAATTAACATCGTT ACAATCAGTTTCTCAAATCGCACCAGAAATAAATACATTATCAAAAAAACACACTTTAACCACAGAACAGTTATCGGCAC ACAGTCAAAAGATGACCGTTAAAAGTGAACAGGTGCAGGCGCATGTAAAAGAGCTGCATGGTATGTTTGAACGGGTTTAC CAAAAAGCGGATCAGGTTATTCGCTGGGTTGAAACCATTGAAACCCTCAATATTGGCAACTGGGTGCAGAATATTAAAGG CACCTTGAATTCCCGCGCAAAAAATCAGGTGATCACCGCCAAAGGTGATATAAAAGTCGATGCCGAACGCATCCATATGG GGTAG
Upstream 100 bases:
>100_bases AGTCTCACATTAGCCACGGACAAAAAGAAACAGGCAGCTGAAAATTTTAGTAAGTAGTCAGTCTGTAAATATGTTATAAA AGATAACTAAGGAAATGATT
Downstream 100 bases:
>100_bases GACAGTTTATGTTTGCAAAAACTCAAATGGGCGGACTGGACTTTGCCATGCCTGATGTATGTTTAACGCCGATTCCATCA CCCGTGGGCCCTATTCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MLNNVISMHSPTTASLFSGHVKKEVKDVFIVQSESGVFPAKHAASCLLQPEVDDKVLLSMTDGELYILAILEKSSQKSKL KFKGDVCLESDAGLSLSSAKALQLTSLQSVSQIAPEINTLSKKHTLTTEQLSAHSQKMTVKSEQVQAHVKELHGMFERVY QKADQVIRWVETIETLNIGNWVQNIKGTLNSRAKNQVITAKGDIKVDAERIHMG
Sequences:
>Translated_214_residues MLNNVISMHSPTTASLFSGHVKKEVKDVFIVQSESGVFPAKHAASCLLQPEVDDKVLLSMTDGELYILAILEKSSQKSKL KFKGDVCLESDAGLSLSSAKALQLTSLQSVSQIAPEINTLSKKHTLTTEQLSAHSQKMTVKSEQVQAHVKELHGMFERVY QKADQVIRWVETIETLNIGNWVQNIKGTLNSRAKNQVITAKGDIKVDAERIHMG >Mature_214_residues MLNNVISMHSPTTASLFSGHVKKEVKDVFIVQSESGVFPAKHAASCLLQPEVDDKVLLSMTDGELYILAILEKSSQKSKL KFKGDVCLESDAGLSLSSAKALQLTSLQSVSQIAPEINTLSKKHTLTTEQLSAHSQKMTVKSEQVQAHVKELHGMFERVY QKADQVIRWVETIETLNIGNWVQNIKGTLNSRAKNQVITAKGDIKVDAERIHMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23596; Mature: 23596
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNNVISMHSPTTASLFSGHVKKEVKDVFIVQSESGVFPAKHAASCLLQPEVDDKVLLSM CCCCEEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHCCCCCCCCEEEEEE TDGELYILAILEKSSQKSKLKFKGDVCLESDAGLSLSSAKALQLTSLQSVSQIAPEINTL CCCCEEEEEEEECCCCCCCEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SKKHTLTTEQLSAHSQKMTVKSEQVQAHVKELHGMFERVYQKADQVIRWVETIETLNIGN HHHHCCCHHHHHHHHHHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH WVQNIKGTLNSRAKNQVITAKGDIKVDAERIHMG HHHHHHHHHCCHHHCCEEEECCCEEEEHHEECCC >Mature Secondary Structure MLNNVISMHSPTTASLFSGHVKKEVKDVFIVQSESGVFPAKHAASCLLQPEVDDKVLLSM CCCCEEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHCCCCCCCCEEEEEE TDGELYILAILEKSSQKSKLKFKGDVCLESDAGLSLSSAKALQLTSLQSVSQIAPEINTL CCCCEEEEEEEECCCCCCCEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SKKHTLTTEQLSAHSQKMTVKSEQVQAHVKELHGMFERVYQKADQVIRWVETIETLNIGN HHHHCCCHHHHHHHHHHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH WVQNIKGTLNSRAKNQVITAKGDIKVDAERIHMG HHHHHHHHHCCHHHCCEEEECCCEEEEHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA