Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119943812

Identifier: 119943812

GI number: 119943812

Start: 26407

End: 28101

Strand: Direct

Name: 119943812

Synonym: Ping_0018

Alternate gene names: NA

Gene position: 26407-28101 (Clockwise)

Preceding gene: 119943811

Following gene: 119943813

Centisome position: 0.58

GC content: 37.64

Gene sequence:

>1695_bases
ATGCTTGATGTCAAAAATATTTCGTTTTTGCCAAAGCAGGGAGGGACGGTTCCTTTTAAAACATTAATCCTTGCTCCGCT
TGGTGGCCATAATGCCATTGAGCAGTTGCTTGAACCAACTGAAATTAATATCCGTAATTTTGATACTGTTATTAAAGAGT
TTTCACCGACTGTTGATGTAGATATAGCTAACTCTGGACTGTGCCAATTACTTAATGTCGATCAGCAAATAATCACCCTC
AGTTATACTATTGATTGCTACGCAGACTTTAAACCAACAGCCATTATCAAAAAAGAACCTTCTTTACGGGAAGTTTCACA
CATTATTGATCTAATACATCAACAACTTCAGCTAGATGGAACTACTTTTAGTACCGCTCCCTTTGAGCTTCAGCACGTGA
AAATCGCCGAGTTGGAAAAAGAGTCGGTCAAAAGGCATGAACTTGAATTAGTTGTTTGTGAATTAGAGTTAATTCTATCT
CGAATATTAAACCAAATTCTGCATCAAGCCGATTGGCAGCAGCTTGAAGCATCTTGGCGCGGTATATATTGGCTATGCCA
AACAGCAGAAAGCAGTCACTCTCTGATTATTGAATGTGCCAGTGCAACTAAGCAGTTACTTTGGGATGATCTTTTCACTA
ATACCGACTTACTCGATTCAAATTTATATCAGCAGGTTTACGTTGACAGTATCGGTCAATATGGCGCTGTTCCCTATGGT
GTTTTATTAATTGATGATTACTTTTCTGGCGCGGGTTCAGATCTTACTTTGCTTAAAGCGATTACTGAGGTGTGCAGTAA
AGCGCATTTACCTGTTGTCACGGGCGCAAATGCTCGGATGTTTGATGTTAATGACTTTAATACATTGCAGGATTCAGATT
ATATTTCTGAAATTCATGCCGGACACCGATATATAAAATGGCGTAATTTTATCTCAACAGAAGAAGCTAGTTTTCTCGCT
TTAACCATGCCGAGATTATTATTTAGGAATGCCTATGGTAAAGGTGATTCGGCACTCAGTTGGTTTCAAGAAAACATAGG
TGATAGTCACGAAGACTGCCTATGGGGCAACGCAAGTTTTGGATTTGTTGATAATTTGCTTAAAAGCTTTCAAGAAAGCG
GTTTTTGTACTTTTATTTCCGGCATGGAAGGGGGGCGATTAAATTTATCGGCGTTGTTAAATAAGTCGCCTAATTTACCC
ATTGAAATTGCTTTTTCTGAAGAAAAAGAAGCCGAGTTAATAAAGTTAGGCTTTAATCCTGTCTGTACAAGGGCTTATCA
CAATATATTACTTTTTGAGTCAGCAAATTCTGTGCGTTGGGGTAATCTAAAACTTAATTACCGAACACAAAATATTGATA
CTATTGCCAGTGCCCAATTGCAGTATTTATTTATTGTTATGCGTATTATTCATTGTTTAAAAATCATATTCAGAGAAAGT
GTTGGTGCGACGACCAACTCAACAGAGTTATCTCATATTTTAAATCGATGGATCAGACAATTTGTCTCAGATGTTGAAGC
ACCTTCTAAATCGTTACGCGCACAAAGACCCTTAAAAGATGCAAAAGTCCTGGTGGTAGAAACAAATAATATAGGATGGT
TTGAGATTGAAATAGAGCTCAGCCCGCATATGAAATACTTAGGCAGTACTATCTCCATTAATACCCTTATTTTTATGAAT
GAAGAGGTCAGCTAA

Upstream 100 bases:

>100_bases
CGTTAAATTAAATATCAAAGGTGCCGATAGGTTAAGACAAGCGTTATCTATCAAACCACCACAACCGCCTGAATCAATCG
CGCAATGTTGGATGTAAAGT

Downstream 100 bases:

>100_bases
TGGAATTTTCGGGTTATATGAAAATTGAAGGTGATATTCAGGGCGTTATTGAAGGCTCTTCAATTAGAAAAAATCGAGAA
ACGAGTATTGATCTTTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MLDVKNISFLPKQGGTVPFKTLILAPLGGHNAIEQLLEPTEINIRNFDTVIKEFSPTVDVDIANSGLCQLLNVDQQIITL
SYTIDCYADFKPTAIIKKEPSLREVSHIIDLIHQQLQLDGTTFSTAPFELQHVKIAELEKESVKRHELELVVCELELILS
RILNQILHQADWQQLEASWRGIYWLCQTAESSHSLIIECASATKQLLWDDLFTNTDLLDSNLYQQVYVDSIGQYGAVPYG
VLLIDDYFSGAGSDLTLLKAITEVCSKAHLPVVTGANARMFDVNDFNTLQDSDYISEIHAGHRYIKWRNFISTEEASFLA
LTMPRLLFRNAYGKGDSALSWFQENIGDSHEDCLWGNASFGFVDNLLKSFQESGFCTFISGMEGGRLNLSALLNKSPNLP
IEIAFSEEKEAELIKLGFNPVCTRAYHNILLFESANSVRWGNLKLNYRTQNIDTIASAQLQYLFIVMRIIHCLKIIFRES
VGATTNSTELSHILNRWIRQFVSDVEAPSKSLRAQRPLKDAKVLVVETNNIGWFEIEIELSPHMKYLGSTISINTLIFMN
EEVS

Sequences:

>Translated_564_residues
MLDVKNISFLPKQGGTVPFKTLILAPLGGHNAIEQLLEPTEINIRNFDTVIKEFSPTVDVDIANSGLCQLLNVDQQIITL
SYTIDCYADFKPTAIIKKEPSLREVSHIIDLIHQQLQLDGTTFSTAPFELQHVKIAELEKESVKRHELELVVCELELILS
RILNQILHQADWQQLEASWRGIYWLCQTAESSHSLIIECASATKQLLWDDLFTNTDLLDSNLYQQVYVDSIGQYGAVPYG
VLLIDDYFSGAGSDLTLLKAITEVCSKAHLPVVTGANARMFDVNDFNTLQDSDYISEIHAGHRYIKWRNFISTEEASFLA
LTMPRLLFRNAYGKGDSALSWFQENIGDSHEDCLWGNASFGFVDNLLKSFQESGFCTFISGMEGGRLNLSALLNKSPNLP
IEIAFSEEKEAELIKLGFNPVCTRAYHNILLFESANSVRWGNLKLNYRTQNIDTIASAQLQYLFIVMRIIHCLKIIFRES
VGATTNSTELSHILNRWIRQFVSDVEAPSKSLRAQRPLKDAKVLVVETNNIGWFEIEIELSPHMKYLGSTISINTLIFMN
EEVS
>Mature_564_residues
MLDVKNISFLPKQGGTVPFKTLILAPLGGHNAIEQLLEPTEINIRNFDTVIKEFSPTVDVDIANSGLCQLLNVDQQIITL
SYTIDCYADFKPTAIIKKEPSLREVSHIIDLIHQQLQLDGTTFSTAPFELQHVKIAELEKESVKRHELELVVCELELILS
RILNQILHQADWQQLEASWRGIYWLCQTAESSHSLIIECASATKQLLWDDLFTNTDLLDSNLYQQVYVDSIGQYGAVPYG
VLLIDDYFSGAGSDLTLLKAITEVCSKAHLPVVTGANARMFDVNDFNTLQDSDYISEIHAGHRYIKWRNFISTEEASFLA
LTMPRLLFRNAYGKGDSALSWFQENIGDSHEDCLWGNASFGFVDNLLKSFQESGFCTFISGMEGGRLNLSALLNKSPNLP
IEIAFSEEKEAELIKLGFNPVCTRAYHNILLFESANSVRWGNLKLNYRTQNIDTIASAQLQYLFIVMRIIHCLKIIFRES
VGATTNSTELSHILNRWIRQFVSDVEAPSKSLRAQRPLKDAKVLVVETNNIGWFEIEIELSPHMKYLGSTISINTLIFMN
EEVS

Specific function: Unknown

COG id: COG3517

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63698; Mature: 63698

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVKNISFLPKQGGTVPFKTLILAPLGGHNAIEQLLEPTEINIRNFDTVIKEFSPTVDV
CCCCCCCCCCCCCCCCCCEEHEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEE
DIANSGLCQLLNVDQQIITLSYTIDCYADFKPTAIIKKEPSLREVSHIIDLIHQQLQLDG
EECCCCHHHHHCCCCEEEEEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC
TTFSTAPFELQHVKIAELEKESVKRHELELVVCELELILSRILNQILHQADWQQLEASWR
CEECCCCCEEEEEEHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHC
GIYWLCQTAESSHSLIIECASATKQLLWDDLFTNTDLLDSNLYQQVYVDSIGQYGAVPYG
EEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEE
VLLIDDYFSGAGSDLTLLKAITEVCSKAHLPVVTGANARMFDVNDFNTLQDSDYISEIHA
EEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCCCCHHHHHHHHC
GHRYIKWRNFISTEEASFLALTMPRLLFRNAYGKGDSALSWFQENIGDSHEDCLWGNASF
CCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEECCCCH
GFVDNLLKSFQESGFCTFISGMEGGRLNLSALLNKSPNLPIEIAFSEEKEAELIKLGFNP
HHHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHCCCCCCCEEEEECCCCCCEEEEECCCH
VCTRAYHNILLFESANSVRWGNLKLNYRTQNIDTIASAQLQYLFIVMRIIHCLKIIFRES
HHHHHHHCEEEEECCCCEEECEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGATTNSTELSHILNRWIRQFVSDVEAPSKSLRAQRPLKDAKVLVVETNNIGWFEIEIEL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEECCCEEEEEEEEE
SPHMKYLGSTISINTLIFMNEEVS
CCCHHHCCCEEEEEEEEEEECCCC
>Mature Secondary Structure
MLDVKNISFLPKQGGTVPFKTLILAPLGGHNAIEQLLEPTEINIRNFDTVIKEFSPTVDV
CCCCCCCCCCCCCCCCCCEEHEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEE
DIANSGLCQLLNVDQQIITLSYTIDCYADFKPTAIIKKEPSLREVSHIIDLIHQQLQLDG
EECCCCHHHHHCCCCEEEEEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC
TTFSTAPFELQHVKIAELEKESVKRHELELVVCELELILSRILNQILHQADWQQLEASWR
CEECCCCCEEEEEEHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHC
GIYWLCQTAESSHSLIIECASATKQLLWDDLFTNTDLLDSNLYQQVYVDSIGQYGAVPYG
EEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEE
VLLIDDYFSGAGSDLTLLKAITEVCSKAHLPVVTGANARMFDVNDFNTLQDSDYISEIHA
EEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCCCCHHHHHHHHC
GHRYIKWRNFISTEEASFLALTMPRLLFRNAYGKGDSALSWFQENIGDSHEDCLWGNASF
CCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEECCCCH
GFVDNLLKSFQESGFCTFISGMEGGRLNLSALLNKSPNLPIEIAFSEEKEAELIKLGFNP
HHHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHCCCCCCCEEEEECCCCCCEEEEECCCH
VCTRAYHNILLFESANSVRWGNLKLNYRTQNIDTIASAQLQYLFIVMRIIHCLKIIFRES
HHHHHHHCEEEEECCCCEEECEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGATTNSTELSHILNRWIRQFVSDVEAPSKSLRAQRPLKDAKVLVVETNNIGWFEIEIEL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEECCCEEEEEEEEE
SPHMKYLGSTISINTLIFMNEEVS
CCCHHHCCCEEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA