| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is 119900265
Identifier: 119900265
GI number: 119900265
Start: 4356228
End: 4356950
Strand: Direct
Name: 119900265
Synonym: azo3976
Alternate gene names: NA
Gene position: 4356228-4356950 (Clockwise)
Preceding gene: 119900264
Following gene: 119900266
Centisome position: 99.55
GC content: 69.99
Gene sequence:
>723_bases ATGACCGCAGCCTCCCTCGTCAACGCCGCCCGCACGCTCTCTGAACAGGTCGACAGCCTGCATTTCGCCCCCCCGGTCAG CCACGTCTACAACCCGCTCGGCTACGCCTGGGACATCCACCGGGCGTACCTGGAACGGTATGGCGAAGGACGCAAGCGGG TGATCTTCCTCGGCATGAACCCCGGGCCCTTCGGCATGGCGCAGATCGGTGTGCCCTTCGGCGAAATCGCCACTGCGCGC GACTGGCTGGGGCTGGCCGGCGCGGTGGGACAACCCGCGCAGGTCAATCCCAAGCGCCCGGTGGAAGGTTTCGACTGCGC CCGCTCGGAAGTGAGCGGCCAGCGCCTGTGGGGCTTGTTCCGCAGCCGCTTCAACACCCCGGCCGCCTTCTTCGCCGACC ATTTCGTCGTCAACTACTGTCCGCTCGCGTTCTTCGACCACGGCCGCAACCTGACCCCCGACAAGCTTCCCGCCGGCGAG CAGCGCCCCTTGCTGGCCGCGTGCGACGCGCACCTGCGCGCGGTAACACAGGCGCTGGAGCCGGAATGGGTGATCGGGGT CGGCGCCTGGGCGGAAAAGCGGGCTGCCGAGGCGCTGGCCGGCCTCCCCGTCAAGCTCGGACGCATCCTGCATCCCAGCC CCGCCAGCCCCGCCGCGAACCGTGGCTGGGCGGAGGCGGCGACGCGCCAGCTCGAGCAGCTCGGGATCTGGAGTGCGGCA TGA
Upstream 100 bases:
>100_bases GCTGCAGCGCGACGCCCTCGCGGCGCTCGGCCGCCCCGCCGTTCCCGCCGGTGCCGACGACTAGCCGCGCCACTTTCCAC CGTTCTCCAGCCCTTCACCG
Downstream 100 bases:
>100_bases AAGCACGCACAAAGTCGCCCTTGCCCAAGGCCGCCGCGCCCCGCGGGAGCGGGAAAACCGCGCCGGCGGCTGCCGGCGCC TCGCGGCGCAAGCGCTTGAC
Product: uracil-DNA glycosylase
Products: NA
Alternate protein names: Uracil DNA Glycosylase Superfamily; Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MTAASLVNAARTLSEQVDSLHFAPPVSHVYNPLGYAWDIHRAYLERYGEGRKRVIFLGMNPGPFGMAQIGVPFGEIATAR DWLGLAGAVGQPAQVNPKRPVEGFDCARSEVSGQRLWGLFRSRFNTPAAFFADHFVVNYCPLAFFDHGRNLTPDKLPAGE QRPLLAACDAHLRAVTQALEPEWVIGVGAWAEKRAAEALAGLPVKLGRILHPSPASPAANRGWAEAATRQLEQLGIWSAA
Sequences:
>Translated_240_residues MTAASLVNAARTLSEQVDSLHFAPPVSHVYNPLGYAWDIHRAYLERYGEGRKRVIFLGMNPGPFGMAQIGVPFGEIATAR DWLGLAGAVGQPAQVNPKRPVEGFDCARSEVSGQRLWGLFRSRFNTPAAFFADHFVVNYCPLAFFDHGRNLTPDKLPAGE QRPLLAACDAHLRAVTQALEPEWVIGVGAWAEKRAAEALAGLPVKLGRILHPSPASPAANRGWAEAATRQLEQLGIWSAA >Mature_239_residues TAASLVNAARTLSEQVDSLHFAPPVSHVYNPLGYAWDIHRAYLERYGEGRKRVIFLGMNPGPFGMAQIGVPFGEIATARD WLGLAGAVGQPAQVNPKRPVEGFDCARSEVSGQRLWGLFRSRFNTPAAFFADHFVVNYCPLAFFDHGRNLTPDKLPAGEQ RPLLAACDAHLRAVTQALEPEWVIGVGAWAEKRAAEALAGLPVKLGRILHPSPASPAANRGWAEAATRQLEQLGIWSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI7657597, Length=231, Percent_Identity=51.0822510822511, Blast_Score=229, Evalue=1e-60, Organism=Drosophila melanogaster, GI24647641, Length=225, Percent_Identity=41.3333333333333, Blast_Score=164, Evalue=4e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26045; Mature: 25914
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAASLVNAARTLSEQVDSLHFAPPVSHVYNPLGYAWDIHRAYLERYGEGRKRVIFLGMN CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECC PGPFGMAQIGVPFGEIATARDWLGLAGAVGQPAQVNPKRPVEGFDCARSEVSGQRLWGLF CCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RSRFNTPAAFFADHFVVNYCPLAFFDHGRNLTPDKLPAGEQRPLLAACDAHLRAVTQALE HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC PEWVIGVGAWAEKRAAEALAGLPVKLGRILHPSPASPAANRGWAEAATRQLEQLGIWSAA CCEEEEECCHHHHHHHHHHHCCCHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TAASLVNAARTLSEQVDSLHFAPPVSHVYNPLGYAWDIHRAYLERYGEGRKRVIFLGMN CHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECC PGPFGMAQIGVPFGEIATARDWLGLAGAVGQPAQVNPKRPVEGFDCARSEVSGQRLWGLF CCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RSRFNTPAAFFADHFVVNYCPLAFFDHGRNLTPDKLPAGEQRPLLAACDAHLRAVTQALE HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC PEWVIGVGAWAEKRAAEALAGLPVKLGRILHPSPASPAANRGWAEAATRQLEQLGIWSAA CCEEEEECCHHHHHHHHHHHCCCHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA