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The map label for this gene is sciI

Identifier: 119900185

GI number: 119900185

Start: 4273523

End: 4275019

Strand: Direct

Name: sciI

Synonym: azo3896

Alternate gene names: NA

Gene position: 4273523-4275019 (Clockwise)

Preceding gene: 119900184

Following gene: 119900186

Centisome position: 97.66

GC content: 64.46

Gene sequence:

>1497_bases
ATGGCTGACACGCAAGCCCAGAACGAAGCCCAGGCCGGCGGCCTGGCCATTGAAGGTGGCGATTTCGAATCGCTGCTGCG
CCAGGAATTCAAGCCCAAGACCGACGAAGCCCGCAGCGCCGTCGAAAACGCCGTCCGCACGCTGGCCGAACAGGCCCTGT
CGCAGACCACGCTGATCGGCACCGACGTCGTCAAGTCGATCGAGGCGATCATCGCCGCGCTCGACCAGAAGCTCACCGAA
CAGGTCAACCAGATCATCCACCACGAGGACTTCCAGAAACTGGAAGGTGCCTGGCGCGGCCTGCACTACCTGGTGAACAA
CACCGAAACCGACGAGATGCTGAAGATCCGCGTCTTCAACATCACCAAGAACGAACTCGGCAAGACGCTCAAGCGCTACA
AGGGCACCGCGTGGGACCAGAGCCCGATCTTCAAGCGCGTCTATGAAGAGGAATACGGCCAGTTCGGCGGCGAGCCCTTC
GGTTGCATCGTCGGCGACTACCACTTCGACCAGAGCCCGCCGGACGTCGAACTGCTCGGCGAAATGGCCAAGGTCAGCGC
CGCCGCGCACACCCCGTTCATCACCGGCGCCTCGCCCACCATCATGCAGATGGACTCGTGGCAGGAACTCGCCAACCCGC
GCGATCTCACCAAGATCTTCTCCACGCCGGAATACGCCGCGTGGCGCTCGCTGCGCGAGTCCGACGATGCCAAGTACATC
GGCCTGGCGATGCCGCGCTTCCTGAGCCGCGTGCCCTACGGCGCCCGCACCAACCCGGTCGAGGAGTTCGACTTCGAGGA
AGACACCGGCGCCGCCGACCACAGCAAGTACACCTGGGCCAACGCGGCCTACGCGATGGCGGTCAACATCAACCGCTCGT
TCAAGGAATACGGCTGGTGCTCGCGCATCCGCGGCATCGAATCCGGCGGCGCGGTGGAAAACCTGCCGGTGCACAGCTTC
CCGACCGACGACGGCGGCGTGGACATGAAGTGCCCGACCGAAATCGCCATTTCCGACCGCCGCGAAGCCGAACTGGCCAA
GAACGGCTTCATGCCGCTGGTGCACAAGAAGAACTCCGACTTCGCCGCCTTCATCGGTGCGCAGTCGCTGCACAAGCCGG
CCGAGTACGACGATCCGGACGCGACCGCCAACGCCAACCTCGGCGCGCGCCTGCCCTACCTGTTCGCCACCTGCCGCTTC
GCCCACTACCTGAAGTGCATCGTGCGCGACAAGATCGGCTCGTTCAAGGAACGCGACGACATGCAGCGCTGGCTGCAGGA
CTGGATCATGAACTACGTCGACGGCGATCCTTCGCACTCGTCGGAAGCCACCAAGGCCCGCCGTCCGCTGGCGGCCGCCG
AGGTCGTGGTCGAGGAAGTCGAGGGCAATCCCGGCTTCTACTCGTCCAAGTTCTTCCTGCGCCCGCACTACCAGCTCGAA
GGCCTCACGGTTTCGCTGCGCCTGGTTTCCAAGCTGCCCTCGGCCAAGGGCGGCTGA

Upstream 100 bases:

>100_bases
GCAGACGCTGGCCGCCGCGCCCAAGCCCGAAGACAAGCCGGCCGAATAAGCCCGCGCTTCACCGCACACCCAGCCCACAT
CCGGAGCCGAGGAACACACC

Downstream 100 bases:

>100_bases
TGTACCAACGGCCGGCATGAACGGCCGGTTGAGACGCCTGCTCCCGCGCGGGACGCAGGCGCGCACCACAGATCGCGCCG
GATGGCCTCCGGCGCCTCGC

Product: putative cytoplasmic protein SciI

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MADTQAQNEAQAGGLAIEGGDFESLLRQEFKPKTDEARSAVENAVRTLAEQALSQTTLIGTDVVKSIEAIIAALDQKLTE
QVNQIIHHEDFQKLEGAWRGLHYLVNNTETDEMLKIRVFNITKNELGKTLKRYKGTAWDQSPIFKRVYEEEYGQFGGEPF
GCIVGDYHFDQSPPDVELLGEMAKVSAAAHTPFITGASPTIMQMDSWQELANPRDLTKIFSTPEYAAWRSLRESDDAKYI
GLAMPRFLSRVPYGARTNPVEEFDFEEDTGAADHSKYTWANAAYAMAVNINRSFKEYGWCSRIRGIESGGAVENLPVHSF
PTDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHKKNSDFAAFIGAQSLHKPAEYDDPDATANANLGARLPYLFATCRF
AHYLKCIVRDKIGSFKERDDMQRWLQDWIMNYVDGDPSHSSEATKARRPLAAAEVVVEEVEGNPGFYSSKFFLRPHYQLE
GLTVSLRLVSKLPSAKGG

Sequences:

>Translated_498_residues
MADTQAQNEAQAGGLAIEGGDFESLLRQEFKPKTDEARSAVENAVRTLAEQALSQTTLIGTDVVKSIEAIIAALDQKLTE
QVNQIIHHEDFQKLEGAWRGLHYLVNNTETDEMLKIRVFNITKNELGKTLKRYKGTAWDQSPIFKRVYEEEYGQFGGEPF
GCIVGDYHFDQSPPDVELLGEMAKVSAAAHTPFITGASPTIMQMDSWQELANPRDLTKIFSTPEYAAWRSLRESDDAKYI
GLAMPRFLSRVPYGARTNPVEEFDFEEDTGAADHSKYTWANAAYAMAVNINRSFKEYGWCSRIRGIESGGAVENLPVHSF
PTDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHKKNSDFAAFIGAQSLHKPAEYDDPDATANANLGARLPYLFATCRF
AHYLKCIVRDKIGSFKERDDMQRWLQDWIMNYVDGDPSHSSEATKARRPLAAAEVVVEEVEGNPGFYSSKFFLRPHYQLE
GLTVSLRLVSKLPSAKGG
>Mature_497_residues
ADTQAQNEAQAGGLAIEGGDFESLLRQEFKPKTDEARSAVENAVRTLAEQALSQTTLIGTDVVKSIEAIIAALDQKLTEQ
VNQIIHHEDFQKLEGAWRGLHYLVNNTETDEMLKIRVFNITKNELGKTLKRYKGTAWDQSPIFKRVYEEEYGQFGGEPFG
CIVGDYHFDQSPPDVELLGEMAKVSAAAHTPFITGASPTIMQMDSWQELANPRDLTKIFSTPEYAAWRSLRESDDAKYIG
LAMPRFLSRVPYGARTNPVEEFDFEEDTGAADHSKYTWANAAYAMAVNINRSFKEYGWCSRIRGIESGGAVENLPVHSFP
TDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHKKNSDFAAFIGAQSLHKPAEYDDPDATANANLGARLPYLFATCRFA
HYLKCIVRDKIGSFKERDDMQRWLQDWIMNYVDGDPSHSSEATKARRPLAAAEVVVEEVEGNPGFYSSKFFLRPHYQLEG
LTVSLRLVSKLPSAKGG

Specific function: Unknown

COG id: COG3517

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55620; Mature: 55489

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTQAQNEAQAGGLAIEGGDFESLLRQEFKPKTDEARSAVENAVRTLAEQALSQTTLIG
CCCCCCCCHHCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TDVVKSIEAIIAALDQKLTEQVNQIIHHEDFQKLEGAWRGLHYLVNNTETDEMLKIRVFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
ITKNELGKTLKRYKGTAWDQSPIFKRVYEEEYGQFGGEPFGCIVGDYHFDQSPPDVELLG
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHH
EMAKVSAAAHTPFITGASPTIMQMDSWQELANPRDLTKIFSTPEYAAWRSLRESDDAKYI
HHHHHHHHHCCCEECCCCCCEEECCCHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCEE
GLAMPRFLSRVPYGARTNPVEEFDFEEDTGAADHSKYTWANAAYAMAVNINRSFKEYGWC
HHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCEEECCCEEEEEEECCCCHHHHHHH
SRIRGIESGGAVENLPVHSFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHKKNSD
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCC
FAAFIGAQSLHKPAEYDDPDATANANLGARLPYLFATCRFAHYLKCIVRDKIGSFKERDD
CEEHHCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MQRWLQDWIMNYVDGDPSHSSEATKARRPLAAAEVVVEEVEGNPGFYSSKFFLRPHYQLE
HHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCCEEEC
GLTVSLRLVSKLPSAKGG
CCEEEHHHHHHCCCCCCC
>Mature Secondary Structure 
ADTQAQNEAQAGGLAIEGGDFESLLRQEFKPKTDEARSAVENAVRTLAEQALSQTTLIG
CCCCCCCHHCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TDVVKSIEAIIAALDQKLTEQVNQIIHHEDFQKLEGAWRGLHYLVNNTETDEMLKIRVFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
ITKNELGKTLKRYKGTAWDQSPIFKRVYEEEYGQFGGEPFGCIVGDYHFDQSPPDVELLG
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHH
EMAKVSAAAHTPFITGASPTIMQMDSWQELANPRDLTKIFSTPEYAAWRSLRESDDAKYI
HHHHHHHHHCCCEECCCCCCEEECCCHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCEE
GLAMPRFLSRVPYGARTNPVEEFDFEEDTGAADHSKYTWANAAYAMAVNINRSFKEYGWC
HHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCEEECCCEEEEEEECCCCHHHHHHH
SRIRGIESGGAVENLPVHSFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHKKNSD
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCC
FAAFIGAQSLHKPAEYDDPDATANANLGARLPYLFATCRFAHYLKCIVRDKIGSFKERDD
CEEHHCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MQRWLQDWIMNYVDGDPSHSSEATKARRPLAAAEVVVEEVEGNPGFYSSKFFLRPHYQLE
HHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCCEEEC
GLTVSLRLVSKLPSAKGG
CCEEEHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA