| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is fkbP [H]
Identifier: 119899608
GI number: 119899608
Start: 3656851
End: 3657195
Strand: Reverse
Name: fkbP [H]
Synonym: azo3319
Alternate gene names: 119899608
Gene position: 3657195-3656851 (Counterclockwise)
Preceding gene: 119899609
Following gene: 119899606
Centisome position: 83.57
GC content: 65.22
Gene sequence:
>345_bases ATGACCCAGACCACCACCGCCAGCGGCCTCATCATCGAAGACCTCGAAGTCGGCAGCGGCGATGTCGCGGCGAAGGGCCA GATGGTTTCGGTGCATTACACCGGCTGGCTGACCGATGGCCGCAAGTTCGATTCCAGCAAGGACCGCAACGATCCGTTCA ACTTCCCGCTCGGCGCGGGCCACGTCATCCGCGGTTGGGACGAAGGCGTGCAGGGCATGCAGGTGGGCGGCAAGCGCAAG CTGACGATTCCGCCGGAGCTCGGCTACGGCGCGCGTGGCGCCGGCGGCGTGATCCCGCCCAATGCGACGCTGGTGTTCGA AGTCGAACTGCTGAAAGTGCTGTAA
Upstream 100 bases:
>100_bases TCGCGGCCCGGCGCAAGGGCGGACGCTGACCGCGGGGCACGGCCGCGAGCGGGTAGAATCCCGGTTTTCAAACCCGGGGC GACCCGATCAGGAGAAGCGC
Downstream 100 bases:
>100_bases GCCTGCCGCGCAGGTCGTGCAAAGCGGAGCGCGCCCATCCGGGCCCGCCCCGTTTTTCTTTGGGGGTCGGCTGCCTCAGC CGACCTCGGCCACCAGATCG
Product: peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase; PPIase; Rotamase [H]
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MTQTTTASGLIIEDLEVGSGDVAAKGQMVSVHYTGWLTDGRKFDSSKDRNDPFNFPLGAGHVIRGWDEGVQGMQVGGKRK LTIPPELGYGARGAGGVIPPNATLVFEVELLKVL
Sequences:
>Translated_114_residues MTQTTTASGLIIEDLEVGSGDVAAKGQMVSVHYTGWLTDGRKFDSSKDRNDPFNFPLGAGHVIRGWDEGVQGMQVGGKRK LTIPPELGYGARGAGGVIPPNATLVFEVELLKVL >Mature_113_residues TQTTTASGLIIEDLEVGSGDVAAKGQMVSVHYTGWLTDGRKFDSSKDRNDPFNFPLGAGHVIRGWDEGVQGMQVGGKRKL TIPPELGYGARGAGGVIPPNATLVFEVELLKVL
Specific function: PPIases accelerate the folding of proteins [H]
COG id: COG0545
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 1
Gene ontology:
Cell location: Cytoplasm And Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
Organism=Homo sapiens, GI17149836, Length=106, Percent_Identity=58.4905660377358, Blast_Score=122, Evalue=5e-29, Organism=Homo sapiens, GI4503725, Length=106, Percent_Identity=58.4905660377358, Blast_Score=122, Evalue=5e-29, Organism=Homo sapiens, GI4758380, Length=106, Percent_Identity=52.8301886792453, Blast_Score=114, Evalue=2e-26, Organism=Homo sapiens, GI206725530, Length=91, Percent_Identity=61.5384615384615, Blast_Score=111, Evalue=1e-25, Organism=Homo sapiens, GI17149844, Length=91, Percent_Identity=61.5384615384615, Blast_Score=111, Evalue=1e-25, Organism=Homo sapiens, GI17149842, Length=91, Percent_Identity=61.5384615384615, Blast_Score=111, Evalue=1e-25, Organism=Homo sapiens, GI4503729, Length=87, Percent_Identity=57.4712643678161, Blast_Score=105, Evalue=8e-24, Organism=Homo sapiens, GI224809331, Length=86, Percent_Identity=54.6511627906977, Blast_Score=95, Evalue=1e-20, Organism=Homo sapiens, GI224809329, Length=96, Percent_Identity=52.0833333333333, Blast_Score=94, Evalue=2e-20, Organism=Homo sapiens, GI224809327, Length=96, Percent_Identity=52.0833333333333, Blast_Score=94, Evalue=2e-20, Organism=Homo sapiens, GI4758384, Length=96, Percent_Identity=52.0833333333333, Blast_Score=94, Evalue=2e-20, Organism=Homo sapiens, GI192448443, Length=88, Percent_Identity=51.1363636363636, Blast_Score=92, Evalue=8e-20, Organism=Homo sapiens, GI33469985, Length=88, Percent_Identity=47.7272727272727, Blast_Score=89, Evalue=9e-19, Organism=Homo sapiens, GI8923659, Length=91, Percent_Identity=48.3516483516484, Blast_Score=86, Evalue=6e-18, Organism=Homo sapiens, GI206725547, Length=99, Percent_Identity=44.4444444444444, Blast_Score=84, Evalue=2e-17, Organism=Homo sapiens, GI31317231, Length=100, Percent_Identity=45, Blast_Score=82, Evalue=1e-16, Organism=Homo sapiens, GI150010552, Length=115, Percent_Identity=37.3913043478261, Blast_Score=81, Evalue=2e-16, Organism=Homo sapiens, GI4503727, Length=97, Percent_Identity=46.3917525773196, Blast_Score=80, Evalue=3e-16, Organism=Homo sapiens, GI7706131, Length=96, Percent_Identity=39.5833333333333, Blast_Score=72, Evalue=7e-14, Organism=Homo sapiens, GI17149839, Length=79, Percent_Identity=46.8354430379747, Blast_Score=68, Evalue=2e-12, Organism=Homo sapiens, GI206725544, Length=107, Percent_Identity=34.5794392523364, Blast_Score=64, Evalue=3e-11, Organism=Homo sapiens, GI146229346, Length=115, Percent_Identity=33.0434782608696, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI87082390, Length=111, Percent_Identity=52.2522522522522, Blast_Score=105, Evalue=9e-25, Organism=Escherichia coli, GI1789745, Length=109, Percent_Identity=48.6238532110092, Blast_Score=90, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17540882, Length=91, Percent_Identity=56.043956043956, Blast_Score=109, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71993519, Length=88, Percent_Identity=60.2272727272727, Blast_Score=106, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17561782, Length=87, Percent_Identity=52.8735632183908, Blast_Score=91, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17561778, Length=97, Percent_Identity=44.3298969072165, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71993555, Length=67, Percent_Identity=52.2388059701493, Blast_Score=76, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17506167, Length=113, Percent_Identity=37.1681415929204, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17506169, Length=113, Percent_Identity=37.1681415929204, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17561780, Length=103, Percent_Identity=37.8640776699029, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324194, Length=103, Percent_Identity=53.3980582524272, Blast_Score=108, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6320727, Length=92, Percent_Identity=59.7826086956522, Blast_Score=105, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6323482, Length=103, Percent_Identity=46.6019417475728, Blast_Score=88, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6323566, Length=105, Percent_Identity=43.8095238095238, Blast_Score=87, Evalue=4e-19, Organism=Drosophila melanogaster, GI281363946, Length=92, Percent_Identity=61.9565217391304, Blast_Score=124, Evalue=1e-29, Organism=Drosophila melanogaster, GI17352457, Length=92, Percent_Identity=61.9565217391304, Blast_Score=124, Evalue=1e-29, Organism=Drosophila melanogaster, GI24655568, Length=106, Percent_Identity=57.5471698113208, Blast_Score=121, Evalue=8e-29, Organism=Drosophila melanogaster, GI24647110, Length=109, Percent_Identity=53.2110091743119, Blast_Score=107, Evalue=1e-24, Organism=Drosophila melanogaster, GI24583150, Length=104, Percent_Identity=49.0384615384615, Blast_Score=101, Evalue=1e-22, Organism=Drosophila melanogaster, GI21356629, Length=92, Percent_Identity=63.0434782608696, Blast_Score=99, Evalue=6e-22,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001179 [H]
Pfam domain/function: PF00254 FKBP_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 12098; Mature: 11967
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTTTASGLIIEDLEVGSGDVAAKGQMVSVHYTGWLTDGRKFDSSKDRNDPFNFPLGAG CCCCCCCCCEEEEEEECCCCCEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC HVIRGWDEGVQGMQVGGKRKLTIPPELGYGARGAGGVIPPNATLVFEVELLKVL CEEECCCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure TQTTTASGLIIEDLEVGSGDVAAKGQMVSVHYTGWLTDGRKFDSSKDRNDPFNFPLGAG CCCCCCCCEEEEEEECCCCCEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC HVIRGWDEGVQGMQVGGKRKLTIPPELGYGARGAGGVIPPNATLVFEVELLKVL CEEECCCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]