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The map label for this gene is yhdH [H]

Identifier: 119899606

GI number: 119899606

Start: 3653743

End: 3654726

Strand: Reverse

Name: yhdH [H]

Synonym: azo3317

Alternate gene names: 119899606

Gene position: 3654726-3653743 (Counterclockwise)

Preceding gene: 119899608

Following gene: 119899597

Centisome position: 83.52

GC content: 71.04

Gene sequence:

>984_bases
ATGTTCAAGGCCATCCTGATCGACAAGGACGACACCGGCTACCGCGCCACGCTGCAGGACGTCCATGAGGCTCAACTGCC
CGCCGGCGAGGTGCGCGTGCGGGTCGCGTGGTCCACGCTCAACTACAAGGACGGGCTGGCGATGACCGGCAAGGTGCCGG
TGGTGCGCAGCTTTCCGATGGTGCCGGGCATCGATTTCGCGGGCACGGTCGAGGAGAGCAGCCATCCCGACTACAAGCCC
GGTGATGCGGTGGTGCTCAACGGCTGGGGCGTGGGCGAGGTGCATTGGGGCGGGCTGGCACAGCAGGCGCGGGTGAAGGC
CGACTGGCTGATTCCGCTGCCGGCGGCGTTTACCCCGCGCCAGGCGATGGCGATCGGCACCGCCGGCTATACCGCGATGC
TGTGCGTACTCGCGCTGGAACGCCACGGGGTCACCCCGGCCGCCGGCGACGTGCTGGTGACCGGCGCCGCGGGCGGGGTG
GGCAGCGTTGCGGTGGCGCTGCTGGCGCGGCTGGGCTATCGCGTCGTCGCCTCCACCGGGCGCCCCTCGGAGGCCGACTA
CCTGACCCACCTCGGGGCTGCGGAGATCATCGACCGCGCCCAGTTCTCCGCGCCGGGCAAACCGCTGGCGAAGGAGCGCT
GGGCCGCGGCGATCGACACCGTCGGCAGCCATACACTCGCCAACGTCTGCGCCAGCATGCGCTACCGCGGCGTCGTCGCC
GCCTGCGGGTTGGCGCAGGGCATGGATCTGCCCGCCACGGTGGCGCCCTTCATCCTGCGCGGCGTCACGCTGGCAGGGGT
GGATAGCGTGTATTGCCCGCGGCCGGAACGCCTGCAGGCCTGGCAGCGGCTTGCGACCGACCTCGATCCGGCGCTGCTCG
ACACCATCACCCACGAGATCGGCCTGGGCGAGGCGATCACCACCGCCGGGCTGCTGCTCGAAGGCAAGGTGCGCGGCCGC
GTCATCGTCGACGTCAATCGCTGA

Upstream 100 bases:

>100_bases
CGCCCCCGACCGGCTGCCGTACCTCGCGCTCGGCAGGGGCGGCGCCAGGGGCCGGTTCTCCCGAACCGCGCGCCGCACGC
ACTTCACTGGAGGAGAGACG

Downstream 100 bases:

>100_bases
GGGCAGACGCGGCCGCAAGGCGGCGGCGCAGCGTGCGCGTCAGCAGGCCGACCCACGGCAGGCGGTCGTACAGTGCCGCC
GCGTCCCAGTAGTCGCGATG

Product: zinc-binding alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MFKAILIDKDDTGYRATLQDVHEAQLPAGEVRVRVAWSTLNYKDGLAMTGKVPVVRSFPMVPGIDFAGTVEESSHPDYKP
GDAVVLNGWGVGEVHWGGLAQQARVKADWLIPLPAAFTPRQAMAIGTAGYTAMLCVLALERHGVTPAAGDVLVTGAAGGV
GSVAVALLARLGYRVVASTGRPSEADYLTHLGAAEIIDRAQFSAPGKPLAKERWAAAIDTVGSHTLANVCASMRYRGVVA
ACGLAQGMDLPATVAPFILRGVTLAGVDSVYCPRPERLQAWQRLATDLDPALLDTITHEIGLGEAITTAGLLLEGKVRGR
VIVDVNR

Sequences:

>Translated_327_residues
MFKAILIDKDDTGYRATLQDVHEAQLPAGEVRVRVAWSTLNYKDGLAMTGKVPVVRSFPMVPGIDFAGTVEESSHPDYKP
GDAVVLNGWGVGEVHWGGLAQQARVKADWLIPLPAAFTPRQAMAIGTAGYTAMLCVLALERHGVTPAAGDVLVTGAAGGV
GSVAVALLARLGYRVVASTGRPSEADYLTHLGAAEIIDRAQFSAPGKPLAKERWAAAIDTVGSHTLANVCASMRYRGVVA
ACGLAQGMDLPATVAPFILRGVTLAGVDSVYCPRPERLQAWQRLATDLDPALLDTITHEIGLGEAITTAGLLLEGKVRGR
VIVDVNR
>Mature_327_residues
MFKAILIDKDDTGYRATLQDVHEAQLPAGEVRVRVAWSTLNYKDGLAMTGKVPVVRSFPMVPGIDFAGTVEESSHPDYKP
GDAVVLNGWGVGEVHWGGLAQQARVKADWLIPLPAAFTPRQAMAIGTAGYTAMLCVLALERHGVTPAAGDVLVTGAAGGV
GSVAVALLARLGYRVVASTGRPSEADYLTHLGAAEIIDRAQFSAPGKPLAKERWAAAIDTVGSHTLANVCASMRYRGVVA
ACGLAQGMDLPATVAPFILRGVTLAGVDSVYCPRPERLQAWQRLATDLDPALLDTITHEIGLGEAITTAGLLLEGKVRGR
VIVDVNR

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=325, Percent_Identity=54.7692307692308, Blast_Score=355, Evalue=3e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34436; Mature: 34436

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKAILIDKDDTGYRATLQDVHEAQLPAGEVRVRVAWSTLNYKDGLAMTGKVPVVRSFPM
CCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCEEECCCCHHCCCCC
VPGIDFAGTVEESSHPDYKPGDAVVLNGWGVGEVHWGGLAQQARVKADWLIPLPAAFTPR
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEECCCCCHHHCCCEEEEEECCCCCCCC
QAMAIGTAGYTAMLCVLALERHGVTPAAGDVLVTGAAGGVGSVAVALLARLGYRVVASTG
HHEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEECCC
RPSEADYLTHLGAAEIIDRAQFSAPGKPLAKERWAAAIDTVGSHTLANVCASMRYRGVVA
CCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ACGLAQGMDLPATVAPFILRGVTLAGVDSVYCPRPERLQAWQRLATDLDPALLDTITHEI
HHHHHCCCCCCHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
GLGEAITTAGLLLEGKVRGRVIVDVNR
CCCHHHHHHCEEEECCCCCEEEEEECC
>Mature Secondary Structure
MFKAILIDKDDTGYRATLQDVHEAQLPAGEVRVRVAWSTLNYKDGLAMTGKVPVVRSFPM
CCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCEEECCCCHHCCCCC
VPGIDFAGTVEESSHPDYKPGDAVVLNGWGVGEVHWGGLAQQARVKADWLIPLPAAFTPR
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEECCCCCHHHCCCEEEEEECCCCCCCC
QAMAIGTAGYTAMLCVLALERHGVTPAAGDVLVTGAAGGVGSVAVALLARLGYRVVASTG
HHEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEECCC
RPSEADYLTHLGAAEIIDRAQFSAPGKPLAKERWAAAIDTVGSHTLANVCASMRYRGVVA
CCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ACGLAQGMDLPATVAPFILRGVTLAGVDSVYCPRPERLQAWQRLATDLDPALLDTITHEI
HHHHHCCCCCCHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
GLGEAITTAGLLLEGKVRGRVIVDVNR
CCCHHHHHHCEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]