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The map label for this gene is rlpB

Identifier: 119899505

GI number: 119899505

Start: 3547581

End: 3548096

Strand: Direct

Name: rlpB

Synonym: azo3216

Alternate gene names: NA

Gene position: 3547581-3548096 (Clockwise)

Preceding gene: 119899504

Following gene: 119899506

Centisome position: 81.07

GC content: 68.41

Gene sequence:

>516_bases
ATGCCCACCCCCTTCACCCGCCGCCGCGCCCTCACCCTGCTGGCCGCGGCCGGCGCCACGGCGGCACTGGCCGGCTGCGG
ATTCCGCCTGCGCGGCCCGCAGCCGCTCGACTTCGCCACCATCCATGTCGGCGTCAGCGAATTCTCCGAACTCGGCGCGC
TGCTGCGCCGCCAGATCGCCACCAGCGGTACCACGACCGTGGTGGAGGACGCGGCGAAAGCCGACGTCAGGCTGCAGGTG
CTCGCCAATGAACGCGAGCGCGAAATTCTGAGCCTGACCGGCGCCGGCAAGGTGCGCGAATACCAGCTTACCCAGCGCAT
GCGCTTCCAGCTGCTGGACAAGAACGGCAGCGCGCTGATTCCGCCCACGGCCATCCTGGCACGGCGCGAATACACCTTCG
ACGACGCGCTGATCCTGGGTAAGGAACAGGAGGAAAACCTGCTGTTCCGCGACATGCAGAGCGACCTCGTGCAACAGTTG
ATGCGTCGCCTCGCGGTGGTCCGCCGCCCGCAGTGA

Upstream 100 bases:

>100_bases
CCTCCGAGGCGGCGCAGAAGTTCATGGAAGGCAAGCCGCCGAAGAAGGTGGTGGTCGTGCCCGGCCGGCTCGTCAATATC
GTGGTTTGAGGACTGCACGC

Downstream 100 bases:

>100_bases
ATTTGCGCCCCGACCAGCTCGCGGCCCAGCTCGACAAGCCGCTCGCACCGCTCTGGGTGCTGCACGGCAACGAGCCGCTG
CTGGTGCTCGAAGCCGCCGA

Product: putative lipoprotein

Products: NA

Alternate protein names: Lipoprotein; Lipoprotein B; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane; Rare Lipoprotein B Family; Lipoprotein B Transmembrane Protein

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MPTPFTRRRALTLLAAAGATAALAGCGFRLRGPQPLDFATIHVGVSEFSELGALLRRQIATSGTTTVVEDAAKADVRLQV
LANEREREILSLTGAGKVREYQLTQRMRFQLLDKNGSALIPPTAILARREYTFDDALILGKEQEENLLFRDMQSDLVQQL
MRRLAVVRRPQ

Sequences:

>Translated_171_residues
MPTPFTRRRALTLLAAAGATAALAGCGFRLRGPQPLDFATIHVGVSEFSELGALLRRQIATSGTTTVVEDAAKADVRLQV
LANEREREILSLTGAGKVREYQLTQRMRFQLLDKNGSALIPPTAILARREYTFDDALILGKEQEENLLFRDMQSDLVQQL
MRRLAVVRRPQ
>Mature_170_residues
PTPFTRRRALTLLAAAGATAALAGCGFRLRGPQPLDFATIHVGVSEFSELGALLRRQIATSGTTTVVEDAAKADVRLQVL
ANEREREILSLTGAGKVREYQLTQRMRFQLLDKNGSALIPPTAILARREYTFDDALILGKEQEENLLFRDMQSDLVQQLM
RRLAVVRRPQ

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19005; Mature: 18874

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPFTRRRALTLLAAAGATAALAGCGFRLRGPQPLDFATIHVGVSEFSELGALLRRQIA
CCCCCHHHHHHHHHHHCCHHHHHHCCCEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHH
TSGTTTVVEDAAKADVRLQVLANEREREILSLTGAGKVREYQLTQRMRFQLLDKNGSALI
CCCCHHHHHHHHHCCEEEEEECCCHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCEEC
PPTAILARREYTFDDALILGKEQEENLLFRDMQSDLVQQLMRRLAVVRRPQ
CCHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PTPFTRRRALTLLAAAGATAALAGCGFRLRGPQPLDFATIHVGVSEFSELGALLRRQIA
CCCCHHHHHHHHHHHCCHHHHHHCCCEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHH
TSGTTTVVEDAAKADVRLQVLANEREREILSLTGAGKVREYQLTQRMRFQLLDKNGSALI
CCCCHHHHHHHHHCCEEEEEECCCHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCEEC
PPTAILARREYTFDDALILGKEQEENLLFRDMQSDLVQQLMRRLAVVRRPQ
CCHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA