| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is boxC [H]
Identifier: 119899346
GI number: 119899346
Start: 3360200
End: 3361864
Strand: Direct
Name: boxC [H]
Synonym: azo3056
Alternate gene names: 119899346
Gene position: 3360200-3361864 (Clockwise)
Preceding gene: 119899345
Following gene: 119899347
Centisome position: 76.79
GC content: 67.33
Gene sequence:
>1665_bases GTGGAAGCTGCAAGCGCCAACAAGATCGAACCCGTCGATTACCGCACCGAACCGTCGCGCTACAAGCACTGGAAGCTCGA CGTGAACGGTGAAGTCGCCACGCTGACGCTCAACATCGACGAAGACGGCGGCATCCGCCCCGGCTACAAGCTGAAGTTGA ACTCGTACGACCTCGGCGTCGACATCGAGCTGCACGACGCGCTGCAGCGCATCCGCTTCGAAAACCCCGGCGTCAAGACC GTGGTGTTCACCTCCGGCAAGCCGAAGATCTTCTGTTCCGGCGCCAACATCTACATGCTGGGCGTCTCCACCCACGCCTG GAAGGTGAACTTCTGCAAGTTCACCAACGAAACCCGTAACGGCATCGAGGACGCCAGCCAGTACTCCGGCCTCAAGTTCA TCGCCGCGTGCAACGGCACCACCGCCGGCGGCGGCTACGAGCTGGCGCTGGCCTGCGACGAGATCGTGCTGGTCGACGAC CGCAACTCCTCCGTCTCGCTGCCGGAAGTCCCGCTGCTGGGCGTGCTGCCCGGCACCGGCGGCCTCACCCGCGTCACCGA CAAGCGCAAGGTGCGCCGCGACCACGCCGACATCTTCTGCACCATCTCCGAAGGCGTGCGCGGCCAGCGTGCGAAGGACT GGCGCCTGGTCGACGACGTGGTCAAGGCCCAGCAGTTCGGCGAGCACATCGCCAAGCGCGCCGCCGAACTGGCCAAGCTG TCCGACCGCCCGAGCGGTGCCAAGGGCGTGGCGCTGCCGACGCTGGAGCGCACCGTGGATGCCAGCGGCTACCACTATGA GTTCGTCGATGCGGTGATCGACGCCGCCGGCCGCACCGTCACGCTGACCGTGCGCGCCCCGTCCGCCGTCAGCGCGAAGA CCGCCGCCGAGATCGAAGCCCAGGGCGCCAACTGGTGGCCGCTGAAGATGGCGCGCGAACTCGACGACGCCATCCTCAAC CTGCGCACCAACCACCTCGACATCGGCCTGTGGCAGCTGCGCACCGAAGGCAACGCCCAGGTCGTGCTCGACATCGACGC CACCATCGTTGCCAACCAGGGCAACTGGTTCGTGCGCGAAACGCTGGGCATGCTGCGCCGCACCCTGGCCCGCATCGACG TGTCCTCGCGCAGCCTGTACGCGCTGATCGAGCCGGGCTCCTGCTTCGCCGGCACCCTGCTGGAAGTCGCGCTCGCCGCC GACCGTTCCTACATGCTCGACACCACCACCGCGCCCAACGCCATCGGCCTGTCGGCGATGAACTTCGGCCCGCTGCCGAT GGTGAACGGCCTGTCGCGCATCGCCGCCCGCTTCTACCAGGAAGAGGCGCCGGTCGCCGCGGTGAAGGCGAAGGAAGGCA GCCTGCTGACCGCCGCCGAAGCCTACGAGCTGGGCCTGGTCACCGCGATCCCGGACGACCTCGACTGGGCCGACGAAGTG CGCATCGCGGTCGAGGAACGCGCCGCGCTGTCGCCGGACGCGCTGACCGGCCTCGAAGCCAACCTGCGCTTCGGCATCAC CGAAACCATGAACACCCGCATCTTCGGCCGCCTCTCGGCCTGGCAGAACTGGATCTTCATCCGCCCCAACGCCGTCGGCG AAAACGGCGCGCTGAAGCTCTTCGGTTCCGGCAAGAAGGCCCAGTTCGACTGGAACCGGGTGTAA
Upstream 100 bases:
>100_bases GGACACCGTGATCGACACCTCGGGCGAGACGGTGGACGAGAGTTTCATGAAGTTAAGACAGCTCGTCATGAGCTGAACCC CAAAGAAGAGGAGACAGAAA
Downstream 100 bases:
>100_bases GGCACACGCCGGGCGCCCCATCAGTCCCGGGCGCCCGGCAACCGCATCCCTCGGTCAACCGCGTGGCAAGCCGTCCCCCT GCCGTAGCAGGCGGCGCCTT
Product: benzoyl-CoA-dihydrodiol lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MEAASANKIEPVDYRTEPSRYKHWKLDVNGEVATLTLNIDEDGGIRPGYKLKLNSYDLGVDIELHDALQRIRFENPGVKT VVFTSGKPKIFCSGANIYMLGVSTHAWKVNFCKFTNETRNGIEDASQYSGLKFIAACNGTTAGGGYELALACDEIVLVDD RNSSVSLPEVPLLGVLPGTGGLTRVTDKRKVRRDHADIFCTISEGVRGQRAKDWRLVDDVVKAQQFGEHIAKRAAELAKL SDRPSGAKGVALPTLERTVDASGYHYEFVDAVIDAAGRTVTLTVRAPSAVSAKTAAEIEAQGANWWPLKMARELDDAILN LRTNHLDIGLWQLRTEGNAQVVLDIDATIVANQGNWFVRETLGMLRRTLARIDVSSRSLYALIEPGSCFAGTLLEVALAA DRSYMLDTTTAPNAIGLSAMNFGPLPMVNGLSRIAARFYQEEAPVAAVKAKEGSLLTAAEAYELGLVTAIPDDLDWADEV RIAVEERAALSPDALTGLEANLRFGITETMNTRIFGRLSAWQNWIFIRPNAVGENGALKLFGSGKKAQFDWNRV
Sequences:
>Translated_554_residues MEAASANKIEPVDYRTEPSRYKHWKLDVNGEVATLTLNIDEDGGIRPGYKLKLNSYDLGVDIELHDALQRIRFENPGVKT VVFTSGKPKIFCSGANIYMLGVSTHAWKVNFCKFTNETRNGIEDASQYSGLKFIAACNGTTAGGGYELALACDEIVLVDD RNSSVSLPEVPLLGVLPGTGGLTRVTDKRKVRRDHADIFCTISEGVRGQRAKDWRLVDDVVKAQQFGEHIAKRAAELAKL SDRPSGAKGVALPTLERTVDASGYHYEFVDAVIDAAGRTVTLTVRAPSAVSAKTAAEIEAQGANWWPLKMARELDDAILN LRTNHLDIGLWQLRTEGNAQVVLDIDATIVANQGNWFVRETLGMLRRTLARIDVSSRSLYALIEPGSCFAGTLLEVALAA DRSYMLDTTTAPNAIGLSAMNFGPLPMVNGLSRIAARFYQEEAPVAAVKAKEGSLLTAAEAYELGLVTAIPDDLDWADEV RIAVEERAALSPDALTGLEANLRFGITETMNTRIFGRLSAWQNWIFIRPNAVGENGALKLFGSGKKAQFDWNRV >Mature_554_residues MEAASANKIEPVDYRTEPSRYKHWKLDVNGEVATLTLNIDEDGGIRPGYKLKLNSYDLGVDIELHDALQRIRFENPGVKT VVFTSGKPKIFCSGANIYMLGVSTHAWKVNFCKFTNETRNGIEDASQYSGLKFIAACNGTTAGGGYELALACDEIVLVDD RNSSVSLPEVPLLGVLPGTGGLTRVTDKRKVRRDHADIFCTISEGVRGQRAKDWRLVDDVVKAQQFGEHIAKRAAELAKL SDRPSGAKGVALPTLERTVDASGYHYEFVDAVIDAAGRTVTLTVRAPSAVSAKTAAEIEAQGANWWPLKMARELDDAILN LRTNHLDIGLWQLRTEGNAQVVLDIDATIVANQGNWFVRETLGMLRRTLARIDVSSRSLYALIEPGSCFAGTLLEVALAA DRSYMLDTTTAPNAIGLSAMNFGPLPMVNGLSRIAARFYQEEAPVAAVKAKEGSLLTAAEAYELGLVTAIPDDLDWADEV RIAVEERAALSPDALTGLEANLRFGITETMNTRIFGRLSAWQNWIFIRPNAVGENGALKLFGSGKKAQFDWNRV
Specific function: Catalyzes the ring opening of 2,3-dihydro-2,3- dihydroxybenzoyl-CoA to form 3,4-dehydroadipyl-CoA semialdehyde [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the benzoyl-CoA oxygenase component C family [H]
Homologues:
Organism=Homo sapiens, GI20127408, Length=203, Percent_Identity=30.5418719211823, Blast_Score=74, Evalue=4e-13, Organism=Escherichia coli, GI1788682, Length=214, Percent_Identity=34.5794392523364, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1787659, Length=162, Percent_Identity=30.2469135802469, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17558304, Length=162, Percent_Identity=32.0987654320988, Blast_Score=72, Evalue=9e-13, Organism=Caenorhabditis elegans, GI25144276, Length=173, Percent_Identity=29.4797687861272, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17508953, Length=173, Percent_Identity=29.4797687861272, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17508951, Length=173, Percent_Identity=29.4797687861272, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24653139, Length=229, Percent_Identity=31.8777292576419, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017633 - InterPro: IPR001753 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.2.44 [H]
Molecular weight: Translated: 60432; Mature: 60432
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAASANKIEPVDYRTEPSRYKHWKLDVNGEVATLTLNIDEDGGIRPGYKLKLNSYDLGV CCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCCCCCCEEEEECCEECEE DIELHDALQRIRFENPGVKTVVFTSGKPKIFCSGANIYMLGVSTHAWKVNFCKFTNETRN EEEHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCEEEEEECCCEEEEEEEEECCHHHC GIEDASQYSGLKFIAACNGTTAGGGYELALACDEIVLVDDRNSSVSLPEVPLLGVLPGTG CHHHHHHHCCEEEEEEECCCCCCCCEEEEEEECEEEEEECCCCCCCCCCCCEEEEECCCC GLTRVTDKRKVRRDHADIFCTISEGVRGQRAKDWRLVDDVVKAQQFGEHIAKRAAELAKL CCEECCHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SDRPSGAKGVALPTLERTVDASGYHYEFVDAVIDAAGRTVTLTVRAPSAVSAKTAAEIEA CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHEEEE QGANWWPLKMARELDDAILNLRTNHLDIGLWQLRTEGNAQVVLDIDATIVANQGNWFVRE CCCCCCHHHHHHHHHHHHHHEECCEEEEEEEEEEECCCCEEEEEECEEEEECCCCEEHHH TLGMLRRTLARIDVSSRSLYALIEPGSCFAGTLLEVALAADRSYMLDTTTAPNAIGLSAM HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEC NFGPLPMVNGLSRIAARFYQEEAPVAAVKAKEGSLLTAAEAYELGLVTAIPDDLDWADEV CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHEEEEEEECCCCCCCCHHE RIAVEERAALSPDALTGLEANLRFGITETMNTRIFGRLSAWQNWIFIRPNAVGENGALKL EEEEEHHCCCCCHHHCCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCEEE FGSGKKAQFDWNRV EECCCCCCCCCCCC >Mature Secondary Structure MEAASANKIEPVDYRTEPSRYKHWKLDVNGEVATLTLNIDEDGGIRPGYKLKLNSYDLGV CCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEEEECCCCCCCCCEEEEECCEECEE DIELHDALQRIRFENPGVKTVVFTSGKPKIFCSGANIYMLGVSTHAWKVNFCKFTNETRN EEEHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCEEEEEECCCEEEEEEEEECCHHHC GIEDASQYSGLKFIAACNGTTAGGGYELALACDEIVLVDDRNSSVSLPEVPLLGVLPGTG CHHHHHHHCCEEEEEEECCCCCCCCEEEEEEECEEEEEECCCCCCCCCCCCEEEEECCCC GLTRVTDKRKVRRDHADIFCTISEGVRGQRAKDWRLVDDVVKAQQFGEHIAKRAAELAKL CCEECCHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SDRPSGAKGVALPTLERTVDASGYHYEFVDAVIDAAGRTVTLTVRAPSAVSAKTAAEIEA CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHEEEE QGANWWPLKMARELDDAILNLRTNHLDIGLWQLRTEGNAQVVLDIDATIVANQGNWFVRE CCCCCCHHHHHHHHHHHHHHEECCEEEEEEEEEEECCCCEEEEEECEEEEECCCCEEHHH TLGMLRRTLARIDVSSRSLYALIEPGSCFAGTLLEVALAADRSYMLDTTTAPNAIGLSAM HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEC NFGPLPMVNGLSRIAARFYQEEAPVAAVKAKEGSLLTAAEAYELGLVTAIPDDLDWADEV CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHEEEEEEECCCCCCCCHHE RIAVEERAALSPDALTGLEANLRFGITETMNTRIFGRLSAWQNWIFIRPNAVGENGALKL EEEEEHHCCCCCHHHCCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCEEE FGSGKKAQFDWNRV EECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12399500 [H]