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The map label for this gene is ycbK [H]

Identifier: 119899289

GI number: 119899289

Start: 3296777

End: 3297358

Strand: Reverse

Name: ycbK [H]

Synonym: azo2999

Alternate gene names: 119899289

Gene position: 3297358-3296777 (Counterclockwise)

Preceding gene: 119899290

Following gene: 119899287

Centisome position: 75.35

GC content: 73.54

Gene sequence:

>582_bases
TTGAATTCCTTCGCTTCTTCCCGCCGCAGCATGCTGCGCGCCGGGGCCCGGCTTGCCCTTGCGGCGGTCGCGCTGCCGCT
GGCCCGGCCTGCCGCCGCCGACGCGCCGGACGCCGCCGCGCCCGATGCGCTCGCGCGCCGCCTCGCCTTCGACCACACCC
ACACCGGCGAGCAGCTCGCGCTCACCTACGCGGTGGGCGAGCGCTACCTGCCGGCGGCGCTCGGCGATCTCAACCACTTC
CTGCGCGACCACTACTCCGGCGAGGTCGGCAACATGGACCCGCAGCTGTTCGACCTGCTGCACACGCTGCGTCACACGCT
GGGCTGCAGCGCGCCGTTCCAGGTGATCTCCGCCTACCGCTGCCCCGCCACCAACGACCGCCTGCGCACCAGCCGCGACG
GCGGCGTCGCCCGCCGCAGCCTGCACATGGACGGCAAGGCGATGGACGTCCGCATCGAGGGCGTGGCGCTCGCCGACCTG
CGCGACGCGGCGCTGTCGCTGCAACTGGGCGGGGTCGGCTATTACCCGCGCGAACAGTTCGTGCACGTGGATACCGGCCG
CGTGCGCAGCTGGGCGGGCTGA

Upstream 100 bases:

>100_bases
CGACACGCTGTTGCGGCGCAGTCGTGGAAATTCCCCTGTTGCGGTCGAAGGCGGGCGGGCACAATAGCGCCTGCTTTTCC
TACCCCGGCAGCACAACATC

Downstream 100 bases:

>100_bases
GGTTTCGCTACAGGCGCAGCCCGGCGCATAGCGGCCCCGCTATGCCGGCCGCAAGCGGCAGGTTGTGGCCGGCGGCGAGC
CGCGTCCAGGGCGCGCGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNSFASSRRSMLRAGARLALAAVALPLARPAAADAPDAAAPDALARRLAFDHTHTGEQLALTYAVGERYLPAALGDLNHF
LRDHYSGEVGNMDPQLFDLLHTLRHTLGCSAPFQVISAYRCPATNDRLRTSRDGGVARRSLHMDGKAMDVRIEGVALADL
RDAALSLQLGGVGYYPREQFVHVDTGRVRSWAG

Sequences:

>Translated_193_residues
MNSFASSRRSMLRAGARLALAAVALPLARPAAADAPDAAAPDALARRLAFDHTHTGEQLALTYAVGERYLPAALGDLNHF
LRDHYSGEVGNMDPQLFDLLHTLRHTLGCSAPFQVISAYRCPATNDRLRTSRDGGVARRSLHMDGKAMDVRIEGVALADL
RDAALSLQLGGVGYYPREQFVHVDTGRVRSWAG
>Mature_193_residues
MNSFASSRRSMLRAGARLALAAVALPLARPAAADAPDAAAPDALARRLAFDHTHTGEQLALTYAVGERYLPAALGDLNHF
LRDHYSGEVGNMDPQLFDLLHTLRHTLGCSAPFQVISAYRCPATNDRLRTSRDGGVARRSLHMDGKAMDVRIEGVALADL
RDAALSLQLGGVGYYPREQFVHVDTGRVRSWAG

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=191, Percent_Identity=43.455497382199, Blast_Score=155, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 20877; Mature: 20877

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSFASSRRSMLRAGARLALAAVALPLARPAAADAPDAAAPDALARRLAFDHTHTGEQLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEE
LTYAVGERYLPAALGDLNHFLRDHYSGEVGNMDPQLFDLLHTLRHTLGCSAPFQVISAYR
EEEHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHC
CPATNDRLRTSRDGGVARRSLHMDGKAMDVRIEGVALADLRDAALSLQLGGVGYYPREQF
CCCCCCCCCCCCCCCHHHHEECCCCCEEEEEECCEEEHHHHHHHHEEEECCCCCCCCCCE
VHVDTGRVRSWAG
EECCCCCCCCCCC
>Mature Secondary Structure
MNSFASSRRSMLRAGARLALAAVALPLARPAAADAPDAAAPDALARRLAFDHTHTGEQLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEE
LTYAVGERYLPAALGDLNHFLRDHYSGEVGNMDPQLFDLLHTLRHTLGCSAPFQVISAYR
EEEHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHC
CPATNDRLRTSRDGGVARRSLHMDGKAMDVRIEGVALADLRDAALSLQLGGVGYYPREQF
CCCCCCCCCCCCCCCHHHHEECCCCCEEEEEECCEEEHHHHHHHHEEEECCCCCCCCCCE
VHVDTGRVRSWAG
EECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]