| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yceJ [H]
Identifier: 119899159
GI number: 119899159
Start: 3149082
End: 3149636
Strand: Direct
Name: yceJ [H]
Synonym: azo2869
Alternate gene names: 119899159
Gene position: 3149082-3149636 (Clockwise)
Preceding gene: 119899158
Following gene: 119899160
Centisome position: 71.96
GC content: 69.55
Gene sequence:
>555_bases ATGCACACCCCGCCCGCCCATCCCGCCGCCCGCTACACCGGCACCGCGATCGCGCTGCACTGGCTGATCGCGCTCGCGCT GTTCGCGATCTTCGCGCTCGGCCTCTACATGCACGATCTGCCGCTGTCGCCGACCAAGCTCAAGCTCTACTCCTGGCACA AGTGGGCGGGGGTGACGGTGTTCGCGCTGGTGCTGCTGCGGCTGGGCTGGCGCGCCACCCACCCGGCGCCGGCGCTGCCG GCCGCAATGCCGGCCTACCAGCGCGCCGCGGCCGGGGCGATCCACGTGCTGCTCTACGTGCTGATGCTGCTGATCCCGAT CAGCGGCTGGCTGATGAGTTCGGCCAAGGGCTTCCAGACGGTGTGGTTCGGCGTGCTGCCGCTGCCCGACCTCGTCGCCA AGGACGCCACGCTCGGTGACCGCCTGCAGACGCTGCACTTCGCGCTCAACATGGTGCTGGCCGGTCTGGTGCTGGGCCAT GTCGGTGCCGCACTCAAACACCACTTCATCGACCGCGACGACGTGCTGACGCGGATGCTGCCGCACAAGGCCTGA
Upstream 100 bases:
>100_bases ACCCGGGCAACCCGGCTGCCCGGCGGCGTCACCGACGGCGTGCTGGCAATGGACAGCTTCGCGTTCGGCGACGCCACGGC CTGATCAGGAGGACGTCCGC
Downstream 100 bases:
>100_bases ACGCCGAATCACGCGCTGCCCCGACAACCCATCAGGAAGAAGATCATGCCCCGCTCCCGCCCCGCCGCCCTCGGCCTGCT CGCCGCCAGCCTCGCCCTTT
Product: cytochrome B561
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MHTPPAHPAARYTGTAIALHWLIALALFAIFALGLYMHDLPLSPTKLKLYSWHKWAGVTVFALVLLRLGWRATHPAPALP AAMPAYQRAAAGAIHVLLYVLMLLIPISGWLMSSAKGFQTVWFGVLPLPDLVAKDATLGDRLQTLHFALNMVLAGLVLGH VGAALKHHFIDRDDVLTRMLPHKA
Sequences:
>Translated_184_residues MHTPPAHPAARYTGTAIALHWLIALALFAIFALGLYMHDLPLSPTKLKLYSWHKWAGVTVFALVLLRLGWRATHPAPALP AAMPAYQRAAAGAIHVLLYVLMLLIPISGWLMSSAKGFQTVWFGVLPLPDLVAKDATLGDRLQTLHFALNMVLAGLVLGH VGAALKHHFIDRDDVLTRMLPHKA >Mature_184_residues MHTPPAHPAARYTGTAIALHWLIALALFAIFALGLYMHDLPLSPTKLKLYSWHKWAGVTVFALVLLRLGWRATHPAPALP AAMPAYQRAAAGAIHVLLYVLMLLIPISGWLMSSAKGFQTVWFGVLPLPDLVAKDATLGDRLQTLHFALNMVLAGLVLGH VGAALKHHFIDRDDVLTRMLPHKA
Specific function: Unknown
COG id: COG3038
COG function: function code C; Cytochrome B561
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome b561 family [H]
Homologues:
Organism=Escherichia coli, GI1787296, Length=172, Percent_Identity=38.953488372093, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87082013, Length=176, Percent_Identity=29.5454545454545, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005797 - InterPro: IPR016174 [H]
Pfam domain/function: PF00033 Cytochrom_B_N [H]
EC number: NA
Molecular weight: Translated: 20124; Mature: 20124
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTPPAHPAARYTGTAIALHWLIALALFAIFALGLYMHDLPLSPTKLKLYSWHKWAGVTV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHH FALVLLRLGWRATHPAPALPAAMPAYQRAAAGAIHVLLYVLMLLIPISGWLMSSAKGFQT HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VWFGVLPLPDLVAKDATLGDRLQTLHFALNMVLAGLVLGHVGAALKHHFIDRDDVLTRML HHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC PHKA CCCC >Mature Secondary Structure MHTPPAHPAARYTGTAIALHWLIALALFAIFALGLYMHDLPLSPTKLKLYSWHKWAGVTV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHH FALVLLRLGWRATHPAPALPAAMPAYQRAAAGAIHVLLYVLMLLIPISGWLMSSAKGFQT HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VWFGVLPLPDLVAKDATLGDRLQTLHFALNMVLAGLVLGHVGAALKHHFIDRDDVLTRML HHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC PHKA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]