| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is pgk
Identifier: 119899129
GI number: 119899129
Start: 3118003
End: 3119187
Strand: Direct
Name: pgk
Synonym: azo2839
Alternate gene names: 119899129
Gene position: 3118003-3119187 (Clockwise)
Preceding gene: 119899128
Following gene: 119899132
Centisome position: 71.25
GC content: 67.34
Gene sequence:
>1185_bases ATGCAAGTCAAGAAACTCACCGACCTCGACGTCCGTGGCAAGAAGGTCTTCATCCGCGCCGACCTCAACGTGCCGCAGGA CGAAGCCGGCAACATCACCGAAGACACCCGCATCCGCGCCTCCATCCCGTCCATCCAGTACTGCCTGGACAACGGCGCCG CGGTGATGGTCACCTCCCACCTCGGCCGTCCGACCGAAGGCGAAGTCGGCCCCGACGACACCCTGGCGCCGGTCGCCGTG CGCCTCGGCCAGCTGCTGCACAAGCCGGTCAAGCTGATCGCCAACTGGGTCGAGGGTGGTTTTGAAGTCAAGCCGGGCGA AGTCGTCCTGCTGGAAAACTGCCGCTGCAACAAGGGCGAGAAGAAGGACAACGAAGAGCTGGCGAAGAAGATGGCGGCGC TGTGCGACGTCTATGTCAACGACGCCTTCGGCACCGCCCACCGCGCCGAGGCCACCACCCACGGCATCGCCCGCTTCGCC CCGGTGTCCTGCGCCGGCATCCTGATGGGGGCCGAGATCGACGCGCTGTCGAAGGCGCTGCACCAGCCGGCCCGCCCGCT GGTGGCCATCGTCGGCGGCGCCAAGGTGTCGACCAAGCTGACCATCCTCAAGACGCTGGCCGACAAGGTCGACCAGCTCA TCGTCGGCGGCGGCATCGCCAACACCTTCCTGCTGGCAGCCGGCAAGCGCATCGGCGAATCGCTGGCCGAGCCGGAAATG GTGCGTGAAGCCCAGCAGGTGATGGACATCATGAAGTCGCGCGGCGCCGAAGTGCCGCTGCCGATCGACGTCGTGGTGGC GGACGAGGTGTCGGCCCTGGCGCGCGCCAACCGGATTTCCGTGGATGAAGTCGGCCCGCACGACCGCATCCTCGACTTCG GCCCCAAGACCTCGGCCAAGCTCGCCGACATCATCGCGCACGCCGGCACCATCGTCTGGAACGGTCCGGTCGGCGTGTTC GAGCACGCCCAGTTCGCCGGTGGCACCAAGATGATGGCCTCGGCCATCGCGCACTCCGAGGCGTTCTCCATCGCCGGTGG CGGCGACACCCTGGCCGCGATCGCGAAGTTCCACATCGCTGACGACGTGGGCTACATCTCGACCGGCGGCGGCGCCTTCC TCGAGTTCCTGGAAGGCAAGAAGCTGCCCGCCATCGCCGCGCTGGAAGCGCGCTACGAGGGCTGA
Upstream 100 bases:
>100_bases GACGCCAGCGAAGACGGTTACCAGTAACAGCGCAACCACGAGCCGGGTTCCGGGCACCGCCTGAACCCGGCTCTTCTTAC ATCCGGATCCGATCACGTCC
Downstream 100 bases:
>100_bases GCGGTTTCGCGCTTCACAGCAAAGCGGCGGCCCACGGGCCGCCGTTTGTTTTTGCCGCGATCGGCACCGGGTTGCAGATC AGCCGCGCTGGCTGACCGCG
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MQVKKLTDLDVRGKKVFIRADLNVPQDEAGNITEDTRIRASIPSIQYCLDNGAAVMVTSHLGRPTEGEVGPDDTLAPVAV RLGQLLHKPVKLIANWVEGGFEVKPGEVVLLENCRCNKGEKKDNEELAKKMAALCDVYVNDAFGTAHRAEATTHGIARFA PVSCAGILMGAEIDALSKALHQPARPLVAIVGGAKVSTKLTILKTLADKVDQLIVGGGIANTFLLAAGKRIGESLAEPEM VREAQQVMDIMKSRGAEVPLPIDVVVADEVSALARANRISVDEVGPHDRILDFGPKTSAKLADIIAHAGTIVWNGPVGVF EHAQFAGGTKMMASAIAHSEAFSIAGGGDTLAAIAKFHIADDVGYISTGGGAFLEFLEGKKLPAIAALEARYEG
Sequences:
>Translated_394_residues MQVKKLTDLDVRGKKVFIRADLNVPQDEAGNITEDTRIRASIPSIQYCLDNGAAVMVTSHLGRPTEGEVGPDDTLAPVAV RLGQLLHKPVKLIANWVEGGFEVKPGEVVLLENCRCNKGEKKDNEELAKKMAALCDVYVNDAFGTAHRAEATTHGIARFA PVSCAGILMGAEIDALSKALHQPARPLVAIVGGAKVSTKLTILKTLADKVDQLIVGGGIANTFLLAAGKRIGESLAEPEM VREAQQVMDIMKSRGAEVPLPIDVVVADEVSALARANRISVDEVGPHDRILDFGPKTSAKLADIIAHAGTIVWNGPVGVF EHAQFAGGTKMMASAIAHSEAFSIAGGGDTLAAIAKFHIADDVGYISTGGGAFLEFLEGKKLPAIAALEARYEG >Mature_394_residues MQVKKLTDLDVRGKKVFIRADLNVPQDEAGNITEDTRIRASIPSIQYCLDNGAAVMVTSHLGRPTEGEVGPDDTLAPVAV RLGQLLHKPVKLIANWVEGGFEVKPGEVVLLENCRCNKGEKKDNEELAKKMAALCDVYVNDAFGTAHRAEATTHGIARFA PVSCAGILMGAEIDALSKALHQPARPLVAIVGGAKVSTKLTILKTLADKVDQLIVGGGIANTFLLAAGKRIGESLAEPEM VREAQQVMDIMKSRGAEVPLPIDVVVADEVSALARANRISVDEVGPHDRILDFGPKTSAKLADIIAHAGTIVWNGPVGVF EHAQFAGGTKMMASAIAHSEAFSIAGGGDTLAAIAKFHIADDVGYISTGGGAFLEFLEGKKLPAIAALEARYEG
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family
Homologues:
Organism=Homo sapiens, GI31543397, Length=416, Percent_Identity=43.2692307692308, Blast_Score=289, Evalue=3e-78, Organism=Homo sapiens, GI4505763, Length=412, Percent_Identity=41.9902912621359, Blast_Score=277, Evalue=1e-74, Organism=Escherichia coli, GI1789294, Length=391, Percent_Identity=59.3350383631714, Blast_Score=447, Evalue=1e-127, Organism=Caenorhabditis elegans, GI17508823, Length=411, Percent_Identity=42.3357664233577, Blast_Score=282, Evalue=2e-76, Organism=Saccharomyces cerevisiae, GI6319857, Length=411, Percent_Identity=41.1192214111922, Blast_Score=274, Evalue=2e-74, Organism=Drosophila melanogaster, GI17136394, Length=420, Percent_Identity=40.4761904761905, Blast_Score=250, Evalue=9e-67, Organism=Drosophila melanogaster, GI24581203, Length=416, Percent_Identity=38.9423076923077, Blast_Score=247, Evalue=1e-65,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): PGK_AZOSB (A1K9F0)
Other databases:
- EMBL: AM406670 - RefSeq: YP_934342.1 - ProteinModelPortal: A1K9F0 - SMR: A1K9F0 - STRING: A1K9F0 - GeneID: 4607640 - GenomeReviews: AM406670_GR - KEGG: azo:azo2839 - eggNOG: COG0126 - HOGENOM: HBG453500 - OMA: DCIGDEV - PhylomeDB: A1K9F0 - ProtClustDB: PRK00073 - BioCyc: ASP62928:AZO2839-MONOMER - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_00145 - InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 - Gene3D: G3DSA:3.40.50.1270 - Gene3D: G3DSA:3.40.50.1260 - PANTHER: PTHR11406 - PIRSF: PIRSF000724 - PRINTS: PR00477
Pfam domain/function: PF00162 PGK; SSF53748 PGK
EC number: =2.7.2.3
Molecular weight: Translated: 41548; Mature: 41548
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: BINDING 37-37 BINDING 115-115 BINDING 148-148 BINDING 199-199 BINDING 321-321
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVKKLTDLDVRGKKVFIRADLNVPQDEAGNITEDTRIRASIPSIQYCLDNGAAVMVTSH CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCEEEEEEC LGRPTEGEVGPDDTLAPVAVRLGQLLHKPVKLIANWVEGGFEVKPGEVVLLENCRCNKGE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCCCC KKDNEELAKKMAALCDVYVNDAFGTAHRAEATTHGIARFAPVSCAGILMGAEIDALSKAL CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHH HQPARPLVAIVGGAKVSTKLTILKTLADKVDQLIVGGGIANTFLLAAGKRIGESLAEPEM HCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCHHH VREAQQVMDIMKSRGAEVPLPIDVVVADEVSALARANRISVDEVGPHDRILDFGPKTSAK HHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHH LADIIAHAGTIVWNGPVGVFEHAQFAGGTKMMASAIAHSEAFSIAGGGDTLAAIAKFHIA HHHHHHHCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHH DDVGYISTGGGAFLEFLEGKKLPAIAALEARYEG CCCCEEECCHHHHHHHHCCCCCCHHHHHHHCCCC >Mature Secondary Structure MQVKKLTDLDVRGKKVFIRADLNVPQDEAGNITEDTRIRASIPSIQYCLDNGAAVMVTSH CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCEEEEEEC LGRPTEGEVGPDDTLAPVAVRLGQLLHKPVKLIANWVEGGFEVKPGEVVLLENCRCNKGE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCCCC KKDNEELAKKMAALCDVYVNDAFGTAHRAEATTHGIARFAPVSCAGILMGAEIDALSKAL CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHH HQPARPLVAIVGGAKVSTKLTILKTLADKVDQLIVGGGIANTFLLAAGKRIGESLAEPEM HCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCHHH VREAQQVMDIMKSRGAEVPLPIDVVVADEVSALARANRISVDEVGPHDRILDFGPKTSAK HHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHH LADIIAHAGTIVWNGPVGVFEHAQFAGGTKMMASAIAHSEAFSIAGGGDTLAAIAKFHIA HHHHHHHCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHH DDVGYISTGGGAFLEFLEGKKLPAIAALEARYEG CCCCEEECCHHHHHHHHCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA