| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is tkt [H]
Identifier: 119899126
GI number: 119899126
Start: 3114267
End: 3116330
Strand: Direct
Name: tkt [H]
Synonym: azo2836
Alternate gene names: 119899126
Gene position: 3114267-3116330 (Clockwise)
Preceding gene: 119899125
Following gene: 119899127
Centisome position: 71.17
GC content: 67.83
Gene sequence:
>2064_bases ATGCCGGTTTTTTCAGGCCGGCCCTCCGGCTTCGAGGAAACCATGTCGCAGTCGAGAAACGTCAAGCCCCCGGTCTTCAA CCCCGTCACTGGCGCCATCCGCGCACTTGCGATGGATGCAGTGCAGCAGGCCAACTCCGGCCATCCGGGTGCGCCGATGG GCATGGCGGAAATCGCCGAGGTGCTGTGGCGCCACCACCTCAAGCACAATCCGGCCAACCCGCATTGGGCCGACCGCGAC CGCTTCGTGCTGTCCAACGGCCATGGCTCGATGCTGATCTACGCGCTGCTGCACCTCACCGGCTACGACCTGCCGATCGA GGAAATCAAGCGCTTCCGCCAGCTGCACAGCAAGACGCCGGGCCATCCGGAATACGGCTACACCCCGGGCGTGGAAACCA CCACCGGTCCGCTCGGCCAGGGCATCACCAACGCGGTCGGCATGGCCATCGCCGAAAAGGTGCTGGCGGCCGAATTCAAC CGCGCCGGCCATGAAATCGTCGACCACCGCACTTGGGTCTTCCTGGGCGACGGCTGCCTGATGGAAGGCATCAGCCACGA AGCCTGTTCGCTTGCCGGCACGCTCGGCCTGGGCAAGCTGGTCGCGTTCTACGACGACAACAATATCTCCATCGACGGCC ACGTCGAAGGCTGGTTCACCGACGACACCCCCAAGCGCTTCGAAGCCTACGGCTGGCAGGTGATCCGTGACGTGCAGGGC CACGACCCGGCCGAAATCGAAGCCGCCATCCAGCAGGCGCGGGCCAACACCACCCAGCCCACGCTGATCTGCTGCAAAAC CGTCATCGGCGCCGGCGCCCCTAACAAGCAGGGCGGCCACGACGTGCACGGCGCGCCGCTCGGCACCACCGAAATCGACG CCTGCCGCGCCCACATCGGCTGGACGCACGCTCCGTTCGAAATCCCGGCCGACGTCTATGCTGCGTGGGACGCGCGCCCG GCCGGCGCCAGCGCCGAAGCCGGCTGGAACGACAAGTTCGCTGCCTACGCCGCCGCCTTCCCCGAACTCGCGGCCGAGTT CAAGCGCCGCGTGCAGCAGCAGGCGCTGCCGGCCGACTGGGCGGCGCACGTCGCCACCGTGCTCGGCAAGATCAATGACA AGGGCGAAACCATCGCCACCCGCAAGGCCAGCCAGAACAGCATCGAGGCCTTCGCGCCCAAGCTGCCCGAACTCATCGGC GGCTCGGCCGACCTCGCCGGCTCCAACCTTACGCTGTGGTCGGGCGCCAAGGGCGTCAGCCGCGACACCGGCGGCAACTA CATCTACTACGGCGTGCGCGAATTCGGCATGGCGGCCATCGCCAACGGCATCGCGCTGCATGGCGGCCTGATTCCCTACA CCGCCACCTTCCTGATGTTCAGCGAATACGCCCGCAATGCCCTGCGCATGGCGGCGCTGATGAAGCTGCGCCAGATCTTC GTGTTCACCCACGACTCCATCGGCCTTGGCGAAGACGGCCCCACCCACCAGCCGGTGGAACAGACCGCCACGCTGCGCCT GATTCCCAACATGGACGTCTGGCGCCCGTGCGACACGATGGAGTCCGCGGTGGCCTGGGCGCACGCGATCGAGCGTAAGG ACGGCCCGTCCTGCCTGCTGTTCTCGCGCCAGAACCTGCCCTTCCAGGCCCGCAGCGCCGAGCAGATCGACGCCATCCGC CGGGGCGGCTACGTGCTGTCGGAAGCCGCGGGCGGCACGCCGAAGGCGGTCATCCTCGCCACCGGCTCGGAAGTCGCGCT CGCGATGGCCGCGCAGAAGACGCTGGCCGAGGCCGGCATCGCGGTGCGCGTGGTGTCGATGCCGAGCACCAACGTATTCG ACCGTCAGGATGCCGCCTACAAGGCCGCCGTCCTGCCCGCCGGCCTGCCGCGCATTGCGGTCGAAGCCGGCGTCACCGAC GGCTGGCGCAAGTATGTCGGCCTCGAAGGCGAGGTGATCGGCCTCGACCGCTTCGGTGAATCCGCCCCCGCGGGCGAGCT GTTCAAGTACTTCGGCATTACCGCCGACGCGGTCGTCGAAGCCGTCCGCAAGCTCGTCCGGTAA
Upstream 100 bases:
>100_bases GGACAGCCCCTTCCAGGGCGAAAATTCACGCGCCGGACCAGACACTTACCACATCCTGTCACCAAGCCGAACTACCAATC GGACCGGGTTATCGGCGATA
Downstream 100 bases:
>100_bases TTCGCACGGCGATGGCAGGGACCCGATCAGACGCCCCGCCATCGCGCCGCCAACCAGTTCTGATGCCTGTGTTGCCCACG CTCCTGGAGACTCCTCGATG
Product: transketolase
Products: NA
Alternate protein names: TK 1 [H]
Number of amino acids: Translated: 687; Mature: 686
Protein sequence:
>687_residues MPVFSGRPSGFEETMSQSRNVKPPVFNPVTGAIRALAMDAVQQANSGHPGAPMGMAEIAEVLWRHHLKHNPANPHWADRD RFVLSNGHGSMLIYALLHLTGYDLPIEEIKRFRQLHSKTPGHPEYGYTPGVETTTGPLGQGITNAVGMAIAEKVLAAEFN RAGHEIVDHRTWVFLGDGCLMEGISHEACSLAGTLGLGKLVAFYDDNNISIDGHVEGWFTDDTPKRFEAYGWQVIRDVQG HDPAEIEAAIQQARANTTQPTLICCKTVIGAGAPNKQGGHDVHGAPLGTTEIDACRAHIGWTHAPFEIPADVYAAWDARP AGASAEAGWNDKFAAYAAAFPELAAEFKRRVQQQALPADWAAHVATVLGKINDKGETIATRKASQNSIEAFAPKLPELIG GSADLAGSNLTLWSGAKGVSRDTGGNYIYYGVREFGMAAIANGIALHGGLIPYTATFLMFSEYARNALRMAALMKLRQIF VFTHDSIGLGEDGPTHQPVEQTATLRLIPNMDVWRPCDTMESAVAWAHAIERKDGPSCLLFSRQNLPFQARSAEQIDAIR RGGYVLSEAAGGTPKAVILATGSEVALAMAAQKTLAEAGIAVRVVSMPSTNVFDRQDAAYKAAVLPAGLPRIAVEAGVTD GWRKYVGLEGEVIGLDRFGESAPAGELFKYFGITADAVVEAVRKLVR
Sequences:
>Translated_687_residues MPVFSGRPSGFEETMSQSRNVKPPVFNPVTGAIRALAMDAVQQANSGHPGAPMGMAEIAEVLWRHHLKHNPANPHWADRD RFVLSNGHGSMLIYALLHLTGYDLPIEEIKRFRQLHSKTPGHPEYGYTPGVETTTGPLGQGITNAVGMAIAEKVLAAEFN RAGHEIVDHRTWVFLGDGCLMEGISHEACSLAGTLGLGKLVAFYDDNNISIDGHVEGWFTDDTPKRFEAYGWQVIRDVQG HDPAEIEAAIQQARANTTQPTLICCKTVIGAGAPNKQGGHDVHGAPLGTTEIDACRAHIGWTHAPFEIPADVYAAWDARP AGASAEAGWNDKFAAYAAAFPELAAEFKRRVQQQALPADWAAHVATVLGKINDKGETIATRKASQNSIEAFAPKLPELIG GSADLAGSNLTLWSGAKGVSRDTGGNYIYYGVREFGMAAIANGIALHGGLIPYTATFLMFSEYARNALRMAALMKLRQIF VFTHDSIGLGEDGPTHQPVEQTATLRLIPNMDVWRPCDTMESAVAWAHAIERKDGPSCLLFSRQNLPFQARSAEQIDAIR RGGYVLSEAAGGTPKAVILATGSEVALAMAAQKTLAEAGIAVRVVSMPSTNVFDRQDAAYKAAVLPAGLPRIAVEAGVTD GWRKYVGLEGEVIGLDRFGESAPAGELFKYFGITADAVVEAVRKLVR >Mature_686_residues PVFSGRPSGFEETMSQSRNVKPPVFNPVTGAIRALAMDAVQQANSGHPGAPMGMAEIAEVLWRHHLKHNPANPHWADRDR FVLSNGHGSMLIYALLHLTGYDLPIEEIKRFRQLHSKTPGHPEYGYTPGVETTTGPLGQGITNAVGMAIAEKVLAAEFNR AGHEIVDHRTWVFLGDGCLMEGISHEACSLAGTLGLGKLVAFYDDNNISIDGHVEGWFTDDTPKRFEAYGWQVIRDVQGH DPAEIEAAIQQARANTTQPTLICCKTVIGAGAPNKQGGHDVHGAPLGTTEIDACRAHIGWTHAPFEIPADVYAAWDARPA GASAEAGWNDKFAAYAAAFPELAAEFKRRVQQQALPADWAAHVATVLGKINDKGETIATRKASQNSIEAFAPKLPELIGG SADLAGSNLTLWSGAKGVSRDTGGNYIYYGVREFGMAAIANGIALHGGLIPYTATFLMFSEYARNALRMAALMKLRQIFV FTHDSIGLGEDGPTHQPVEQTATLRLIPNMDVWRPCDTMESAVAWAHAIERKDGPSCLLFSRQNLPFQARSAEQIDAIRR GGYVLSEAAGGTPKAVILATGSEVALAMAAQKTLAEAGIAVRVVSMPSTNVFDRQDAAYKAAVLPAGLPRIAVEAGVTDG WRKYVGLEGEVIGLDRFGESAPAGELFKYFGITADAVVEAVRKLVR
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=666, Percent_Identity=26.7267267267267, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI4507521, Length=666, Percent_Identity=26.7267267267267, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI133778974, Length=677, Percent_Identity=25.5539143279173, Blast_Score=141, Evalue=2e-33, Organism=Escherichia coli, GI48994911, Length=659, Percent_Identity=67.5265553869499, Blast_Score=951, Evalue=0.0, Organism=Escherichia coli, GI1788808, Length=659, Percent_Identity=62.8224582701062, Blast_Score=882, Evalue=0.0, Organism=Caenorhabditis elegans, GI17539652, Length=674, Percent_Identity=25.3709198813056, Blast_Score=160, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6325331, Length=666, Percent_Identity=48.7987987987988, Blast_Score=595, Evalue=1e-171, Organism=Saccharomyces cerevisiae, GI6319593, Length=666, Percent_Identity=44.8948948948949, Blast_Score=542, Evalue=1e-155, Organism=Drosophila melanogaster, GI45551847, Length=674, Percent_Identity=25.8160237388724, Blast_Score=160, Evalue=3e-39, Organism=Drosophila melanogaster, GI45550715, Length=674, Percent_Identity=25.8160237388724, Blast_Score=160, Evalue=3e-39, Organism=Drosophila melanogaster, GI24666278, Length=589, Percent_Identity=25.8064516129032, Blast_Score=148, Evalue=1e-35, Organism=Drosophila melanogaster, GI24645119, Length=646, Percent_Identity=25.3869969040248, Blast_Score=141, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 73770; Mature: 73639
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVFSGRPSGFEETMSQSRNVKPPVFNPVTGAIRALAMDAVQQANSGHPGAPMGMAEIAE CCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH VLWRHHLKHNPANPHWADRDRFVLSNGHGSMLIYALLHLTGYDLPIEEIKRFRQLHSKTP HHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC GHPEYGYTPGVETTTGPLGQGITNAVGMAIAEKVLAAEFNRAGHEIVDHRTWVFLGDGCL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCCHH MEGISHEACSLAGTLGLGKLVAFYDDNNISIDGHVEGWFTDDTPKRFEAYGWQVIRDVQG HHCCCHHHHHHHHHCCCCEEEEEEECCCEEECCEEEEEECCCCCHHHHHHHHHHHHHCCC HDPAEIEAAIQQARANTTQPTLICCKTVIGAGAPNKQGGHDVHGAPLGTTEIDACRAHIG CCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC WTHAPFEIPADVYAAWDARPAGASAEAGWNDKFAAYAAAFPELAAEFKRRVQQQALPADW CCCCCCCCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AAHVATVLGKINDKGETIATRKASQNSIEAFAPKLPELIGGSADLAGSNLTLWSGAKGVS HHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC RDTGGNYIYYGVREFGMAAIANGIALHGGLIPYTATFLMFSEYARNALRMAALMKLRQIF CCCCCCEEEECHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFTHDSIGLGEDGPTHQPVEQTATLRLIPNMDVWRPCDTMESAVAWAHAIERKDGPSCLL EEECCCCCCCCCCCCCCCHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE FSRQNLPFQARSAEQIDAIRRGGYVLSEAAGGTPKAVILATGSEVALAMAAQKTLAEAGI EECCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC AVRVVSMPSTNVFDRQDAAYKAAVLPAGLPRIAVEAGVTDGWRKYVGLEGEVIGLDRFGE EEEEEECCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCHHHHHHHCCCCCEEEHHHCCC SAPAGELFKYFGITADAVVEAVRKLVR CCCHHHHHHHHCCCHHHHHHHHHHHHC >Mature Secondary Structure PVFSGRPSGFEETMSQSRNVKPPVFNPVTGAIRALAMDAVQQANSGHPGAPMGMAEIAE CCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH VLWRHHLKHNPANPHWADRDRFVLSNGHGSMLIYALLHLTGYDLPIEEIKRFRQLHSKTP HHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC GHPEYGYTPGVETTTGPLGQGITNAVGMAIAEKVLAAEFNRAGHEIVDHRTWVFLGDGCL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCCHH MEGISHEACSLAGTLGLGKLVAFYDDNNISIDGHVEGWFTDDTPKRFEAYGWQVIRDVQG HHCCCHHHHHHHHHCCCCEEEEEEECCCEEECCEEEEEECCCCCHHHHHHHHHHHHHCCC HDPAEIEAAIQQARANTTQPTLICCKTVIGAGAPNKQGGHDVHGAPLGTTEIDACRAHIG CCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC WTHAPFEIPADVYAAWDARPAGASAEAGWNDKFAAYAAAFPELAAEFKRRVQQQALPADW CCCCCCCCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AAHVATVLGKINDKGETIATRKASQNSIEAFAPKLPELIGGSADLAGSNLTLWSGAKGVS HHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC RDTGGNYIYYGVREFGMAAIANGIALHGGLIPYTATFLMFSEYARNALRMAALMKLRQIF CCCCCCEEEECHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFTHDSIGLGEDGPTHQPVEQTATLRLIPNMDVWRPCDTMESAVAWAHAIERKDGPSCLL EEECCCCCCCCCCCCCCCHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE FSRQNLPFQARSAEQIDAIRRGGYVLSEAAGGTPKAVILATGSEVALAMAAQKTLAEAGI EECCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC AVRVVSMPSTNVFDRQDAAYKAAVLPAGLPRIAVEAGVTDGWRKYVGLEGEVIGLDRFGE EEEEEECCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCHHHHHHHCCCCCEEEHHHCCC SAPAGELFKYFGITADAVVEAVRKLVR CCCHHHHHHHHCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]