| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is gpmA
Identifier: 119899098
GI number: 119899098
Start: 3091417
End: 3092166
Strand: Reverse
Name: gpmA
Synonym: azo2808
Alternate gene names: 119899098
Gene position: 3092166-3091417 (Counterclockwise)
Preceding gene: 119899105
Following gene: 119899097
Centisome position: 70.66
GC content: 65.47
Gene sequence:
>750_bases ATGTACAAGATCGTCCTGCTTCGCCACGGTGAATCCACCTGGAACAAGGAAAACCGCTTCACCGGCTGGACCGACGTCGA CCTCACCGAACTCGGGGTGGGCGAGGCCCGCGCGGCGGGCCAGTTGCTCAAGCGCGAAGGCTACAGCTTCGATCTCGCCT TCACGTCGGTGCTCAAGCGCGCCAACAAGACGCTGAACATCGTGCTCGAGGAACTCGACGCGCTGTGGCTGCCGGTCGAG CATTCGTGGCGCCTGAACGAACGCCACTACGGCGCGCTGCAGGGCCTGAACAAGGCCGAGACTGCAGCCAAGTTCGGCGA CGACCAGGTGCTGGTGTGGCGCCGTTCCTACGACATCCCGCCGCCGGCGCTGGAAGAAGGCGACGAGCGTCTGAACTATG ACGATCCGCGCTACGGTTCGCTGCCGCGCGCGCGCTTCCCGCGCACCGAATGCCTGGCCGACACCGTGGCTCGCGTGGTG CCGTACTGGGAAACCGTGATCGTGCCGCAGATCCTCTCCGGCCGCCGGATCCTGATCGCGGCGCACGGCAACAGCCTGCG CGCCCTCATCAAGTACCTCGATGGCATTTCCGACGGTGACATCGTCGGGCTCAATATTCCCACGGCGCAGCCGCTGGTCT ATGAGCTTGACGTGAACCTCAAGCCGGTCAAGAGCTACTACCTCGCCGACGAGGACACCATCCGCGCGGCTCAGGCCGCC GTGGCCGGGCAGGGCAAGGCAAAGGGCTGA
Upstream 100 bases:
>100_bases TGTCTCTTGCTCGCCTTGGGCAGGCGCATGATTTTGCCATGCGCGCGGCAGCGTGCTGTGCCCAGGCCTTCGTTCATCAT TCAACCGGATCCGATTTCCC
Downstream 100 bases:
>100_bases CGCGGACCGGAACCTTCCTCCCATGTTGCACCTGCGGCGCTCCGCCGCGCTCGGCCTGGCGGCGCTGCTGGTGGTGGCGT CGCCCCAGCAGCCCGTGCGG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MYKIVLLRHGESTWNKENRFTGWTDVDLTELGVGEARAAGQLLKREGYSFDLAFTSVLKRANKTLNIVLEELDALWLPVE HSWRLNERHYGALQGLNKAETAAKFGDDQVLVWRRSYDIPPPALEEGDERLNYDDPRYGSLPRARFPRTECLADTVARVV PYWETVIVPQILSGRRILIAAHGNSLRALIKYLDGISDGDIVGLNIPTAQPLVYELDVNLKPVKSYYLADEDTIRAAQAA VAGQGKAKG
Sequences:
>Translated_249_residues MYKIVLLRHGESTWNKENRFTGWTDVDLTELGVGEARAAGQLLKREGYSFDLAFTSVLKRANKTLNIVLEELDALWLPVE HSWRLNERHYGALQGLNKAETAAKFGDDQVLVWRRSYDIPPPALEEGDERLNYDDPRYGSLPRARFPRTECLADTVARVV PYWETVIVPQILSGRRILIAAHGNSLRALIKYLDGISDGDIVGLNIPTAQPLVYELDVNLKPVKSYYLADEDTIRAAQAA VAGQGKAKG >Mature_249_residues MYKIVLLRHGESTWNKENRFTGWTDVDLTELGVGEARAAGQLLKREGYSFDLAFTSVLKRANKTLNIVLEELDALWLPVE HSWRLNERHYGALQGLNKAETAAKFGDDQVLVWRRSYDIPPPALEEGDERLNYDDPRYGSLPRARFPRTECLADTVARVV PYWETVIVPQILSGRRILIAAHGNSLRALIKYLDGISDGDIVGLNIPTAQPLVYELDVNLKPVKSYYLADEDTIRAAQAA VAGQGKAKG
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
Homologues:
Organism=Homo sapiens, GI50593010, Length=250, Percent_Identity=54, Blast_Score=284, Evalue=5e-77, Organism=Homo sapiens, GI4505753, Length=250, Percent_Identity=57.2, Blast_Score=281, Evalue=6e-76, Organism=Homo sapiens, GI71274132, Length=250, Percent_Identity=54.8, Blast_Score=263, Evalue=8e-71, Organism=Homo sapiens, GI4502445, Length=252, Percent_Identity=50, Blast_Score=256, Evalue=1e-68, Organism=Homo sapiens, GI40353764, Length=252, Percent_Identity=50, Blast_Score=256, Evalue=1e-68, Organism=Homo sapiens, GI310129614, Length=162, Percent_Identity=56.1728395061728, Blast_Score=175, Evalue=3e-44, Organism=Escherichia coli, GI1786970, Length=246, Percent_Identity=65.4471544715447, Blast_Score=322, Evalue=1e-89, Organism=Saccharomyces cerevisiae, GI6322697, Length=253, Percent_Identity=52.9644268774704, Blast_Score=254, Evalue=9e-69, Organism=Saccharomyces cerevisiae, GI6324516, Length=286, Percent_Identity=34.2657342657343, Blast_Score=151, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6320183, Length=300, Percent_Identity=30.6666666666667, Blast_Score=137, Evalue=2e-33, Organism=Drosophila melanogaster, GI24646216, Length=251, Percent_Identity=53.3864541832669, Blast_Score=270, Evalue=6e-73, Organism=Drosophila melanogaster, GI85725270, Length=251, Percent_Identity=54.1832669322709, Blast_Score=260, Evalue=7e-70, Organism=Drosophila melanogaster, GI85725272, Length=251, Percent_Identity=54.1832669322709, Blast_Score=260, Evalue=7e-70, Organism=Drosophila melanogaster, GI24650981, Length=251, Percent_Identity=54.1832669322709, Blast_Score=260, Evalue=7e-70, Organism=Drosophila melanogaster, GI28571817, Length=249, Percent_Identity=39.3574297188755, Blast_Score=184, Evalue=4e-47, Organism=Drosophila melanogaster, GI28571815, Length=249, Percent_Identity=39.3574297188755, Blast_Score=184, Evalue=5e-47, Organism=Drosophila melanogaster, GI24648979, Length=249, Percent_Identity=39.3574297188755, Blast_Score=184, Evalue=6e-47,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): GPMA_AZOSB (A1K9B9)
Other databases:
- EMBL: AM406670 - RefSeq: YP_934311.1 - ProteinModelPortal: A1K9B9 - SMR: A1K9B9 - STRING: A1K9B9 - GeneID: 4607629 - GenomeReviews: AM406670_GR - KEGG: azo:azo2808 - eggNOG: COG0588 - HOGENOM: HBG658938 - OMA: TGWKDPD - PhylomeDB: A1K9B9 - ProtClustDB: PRK14115 - BioCyc: ASP62928:AZO2808-MONOMER - GO: GO:0006096 - HAMAP: MF_01039 - InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 - PANTHER: PTHR11931 - SMART: SM00855 - TIGRFAMs: TIGR01258
Pfam domain/function: PF00300 PGAM
EC number: =5.4.2.1
Molecular weight: Translated: 27905; Mature: 27905
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00175 PG_MUTASE
Important sites: ACT_SITE 9-9 ACT_SITE 182-182
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKIVLLRHGESTWNKENRFTGWTDVDLTELGVGEARAAGQLLKREGYSFDLAFTSVLKR CEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCEEEHHHHHHHHH ANKTLNIVLEELDALWLPVEHSWRLNERHYGALQGLNKAETAAKFGDDQVLVWRRSYDIP CCHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCC PPALEEGDERLNYDDPRYGSLPRARFPRTECLADTVARVVPYWETVIVPQILSGRRILIA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE AHGNSLRALIKYLDGISDGDIVGLNIPTAQPLVYELDVNLKPVKSYYLADEDTIRAAQAA ECCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCEECHHEEECCCHHHHHHHHH VAGQGKAKG HCCCCCCCC >Mature Secondary Structure MYKIVLLRHGESTWNKENRFTGWTDVDLTELGVGEARAAGQLLKREGYSFDLAFTSVLKR CEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCEEEHHHHHHHHH ANKTLNIVLEELDALWLPVEHSWRLNERHYGALQGLNKAETAAKFGDDQVLVWRRSYDIP CCHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCC PPALEEGDERLNYDDPRYGSLPRARFPRTECLADTVARVVPYWETVIVPQILSGRRILIA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE AHGNSLRALIKYLDGISDGDIVGLNIPTAQPLVYELDVNLKPVKSYYLADEDTIRAAQAA ECCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCEECHHEEECCCHHHHHHHHH VAGQGKAKG HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA