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The map label for this gene is ybdA [C]

Identifier: 119898939

GI number: 119898939

Start: 2925146

End: 2926453

Strand: Reverse

Name: ybdA [C]

Synonym: azo2648

Alternate gene names: 119898939

Gene position: 2926453-2925146 (Counterclockwise)

Preceding gene: 119898940

Following gene: 119898938

Centisome position: 66.87

GC content: 71.79

Gene sequence:

>1308_bases
ATGACGCCCGGCGGCCGGCTCGACGTCCTGCGCGAACCCGATTTCCGATTCTTCCTGTCCGCCAAGCTGCTGGCCACGCT
GGCGGGCCAGATGGTGGGCGTGGCGGTGGGCTGGCAGGTGTATGCGCTCACCAGCGACGTGCTCGCGCTCGGGTTGGTCG
GGCTGGCCCAGTTCGCGCCCTTCATCGTGCTGATCCTGCCTGCCGGCGAAGTCGCCGACCGCTGCGCGCGCACCCGCATC
ATCGGTGCCTGCTACGCGGTGCAGATGCTGGCCGCCACGCTGCTGCTCGCCATCGTGCTCACCGATGTGCGCCAGGTCGG
GCTCATCTACGCGGTGCTGGTGCTGCTCGGCTGCGCCCGCGCCTTCATGATGCCCGCCAGCCAGGCGGTGCTGATCAACC
TGGTGTCGCGGCCGCGCTTCGCGCAGGCGGTGGCACTGCATTCCTCGTCCTTCCACGTCGCGGTGATCGTCGGGCCGCTG
CTCGGCGGCGTGATCTATCTGGCCGGTGCGGGGGCGGTGTACGGGCTGGCGGCCGTGTTGTTCGCCGCCGCGCTGGTGGC
GATGCGGCAGGTGCGCGGCGGCCGGCAGCCCACGCCCTCGGCAACGCCGGGCGGGCGCGGTGCGGTGTTCGACGGGCTGC
GCTTCGTGTTCTCGCGCCCGGTGGTGCTGGGCGCGATCTCGCTCGACCTGTTCGCGGTGCTGTTTGGCGGCGCGGTTGCG
CTGCTGCCGGCGATCGCGCGTGACGTGCTGCAGGTGGACACCGTCGGCATGGGCCTGCTGCGCGCGGCGCCCGCGGCTGG
GGCGGCGCTGGCTTCGGTAGCGCTGGTGTGGCGGCCGATCCGCCACCATGTCGGCCTGTGGATGTTCGGCGGCGTCGCGC
TGTTCGGCATCGCTACCATCGTGTTCGGGCTGTCGCACAGCCTGCCGCTGTCGGTGGTGGCGCTGGCGCTCACCGGCGCC
GGCGACATGGTCAGCGTCTATGTGCGCCACATCCTCGTGCAGCATGAAACGCCGGACGACATCCGTGGCCGTGTCAGCGC
GGTGAATTCGGTCTTCATCGGCGCCTCCAACGAACTCGGCGAATTCGAGTCCGGCGTCACCGCGCGGCTGTTCGGCCTGG
TACCCGCGGTGGTGGTGGGCGGCTGTGCCACGCTCGCGGTCACCGCGGCGTGGATGCGGCTGTTTCCGGCGCTGACCCAC
ATGCGCAGCTTTCCGCACAGCGCGCGCGAGCCCCATCCGGCCGCCGCGCCCGACAGCAACGACAGCGGCGCCGCCCCCGC
GGCCGCGCCCAAGGAGACTTCCCGATGA

Upstream 100 bases:

>100_bases
GGTGGCATCATCACCGTTTGCATGCGGACGGTGGCGGGGCGGTGAACCAGGCAAGTTGCAGGCGGCCGAGGGCGGCGGGC
GGATGCGCCGAGGGCAGACG

Downstream 100 bases:

>100_bases
CCCGTCCCGACCTTGCCGCCTTCGCCACCGCGATCCAGCCCGACGTGGCCGACACCGTCCAACGTACCGATGACGCCGGC
CTTGCCACTGGCGACATCCG

Product: MFS permease

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; DrugProton Antiporter; Facilitator Superfamily Transporter; MFS Permease; Transporter Facilitator Family; Transmembrane Protein; Permease Of Facilitator Superfamily; Multidrug ABC Transporter; Facilitator Superfamily Transporter Permease; MFS Family Transporter; Membrane Transporter; Facilitator Superfamily; Facilitator MFS1 Protein; Integral Membrane Efflux Protein; Permease Facilitator Superfamily; Permease Protein; Drug Resistance Efflux Protein; MFS Family Transporter Protein; Mfs Transporter; Permease MDR ; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transmembrane Transporter; Drug Proton Antiporter; Integral Membrane Protein MFS Transporter; Macrolide-Efflux Protein; Membrame Protein; DrugH+ Antiporter; Facilitator Family Transporter; Facilitator Superfamily Transporter Transporter; Permeases Of Facilitator Superfamily

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MTPGGRLDVLREPDFRFFLSAKLLATLAGQMVGVAVGWQVYALTSDVLALGLVGLAQFAPFIVLILPAGEVADRCARTRI
IGACYAVQMLAATLLLAIVLTDVRQVGLIYAVLVLLGCARAFMMPASQAVLINLVSRPRFAQAVALHSSSFHVAVIVGPL
LGGVIYLAGAGAVYGLAAVLFAAALVAMRQVRGGRQPTPSATPGGRGAVFDGLRFVFSRPVVLGAISLDLFAVLFGGAVA
LLPAIARDVLQVDTVGMGLLRAAPAAGAALASVALVWRPIRHHVGLWMFGGVALFGIATIVFGLSHSLPLSVVALALTGA
GDMVSVYVRHILVQHETPDDIRGRVSAVNSVFIGASNELGEFESGVTARLFGLVPAVVVGGCATLAVTAAWMRLFPALTH
MRSFPHSAREPHPAAAPDSNDSGAAPAAAPKETSR

Sequences:

>Translated_435_residues
MTPGGRLDVLREPDFRFFLSAKLLATLAGQMVGVAVGWQVYALTSDVLALGLVGLAQFAPFIVLILPAGEVADRCARTRI
IGACYAVQMLAATLLLAIVLTDVRQVGLIYAVLVLLGCARAFMMPASQAVLINLVSRPRFAQAVALHSSSFHVAVIVGPL
LGGVIYLAGAGAVYGLAAVLFAAALVAMRQVRGGRQPTPSATPGGRGAVFDGLRFVFSRPVVLGAISLDLFAVLFGGAVA
LLPAIARDVLQVDTVGMGLLRAAPAAGAALASVALVWRPIRHHVGLWMFGGVALFGIATIVFGLSHSLPLSVVALALTGA
GDMVSVYVRHILVQHETPDDIRGRVSAVNSVFIGASNELGEFESGVTARLFGLVPAVVVGGCATLAVTAAWMRLFPALTH
MRSFPHSAREPHPAAAPDSNDSGAAPAAAPKETSR
>Mature_434_residues
TPGGRLDVLREPDFRFFLSAKLLATLAGQMVGVAVGWQVYALTSDVLALGLVGLAQFAPFIVLILPAGEVADRCARTRII
GACYAVQMLAATLLLAIVLTDVRQVGLIYAVLVLLGCARAFMMPASQAVLINLVSRPRFAQAVALHSSSFHVAVIVGPLL
GGVIYLAGAGAVYGLAAVLFAAALVAMRQVRGGRQPTPSATPGGRGAVFDGLRFVFSRPVVLGAISLDLFAVLFGGAVAL
LPAIARDVLQVDTVGMGLLRAAPAAGAALASVALVWRPIRHHVGLWMFGGVALFGIATIVFGLSHSLPLSVVALALTGAG
DMVSVYVRHILVQHETPDDIRGRVSAVNSVFIGASNELGEFESGVTARLFGLVPAVVVGGCATLAVTAAWMRLFPALTHM
RSFPHSAREPHPAAAPDSNDSGAAPAAAPKETSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45012; Mature: 44880

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPGGRLDVLREPDFRFFLSAKLLATLAGQMVGVAVGWQVYALTSDVLALGLVGLAQFAP
CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
FIVLILPAGEVADRCARTRIIGACYAVQMLAATLLLAIVLTDVRQVGLIYAVLVLLGCAR
HHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFMMPASQAVLINLVSRPRFAQAVALHSSSFHVAVIVGPLLGGVIYLAGAGAVYGLAAVL
HHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHH
FAAALVAMRQVRGGRQPTPSATPGGRGAVFDGLRFVFSRPVVLGAISLDLFAVLFGGAVA
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LLPAIARDVLQVDTVGMGLLRAAPAAGAALASVALVWRPIRHHVGLWMFGGVALFGIATI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFGLSHSLPLSVVALALTGAGDMVSVYVRHILVQHETPDDIRGRVSAVNSVFIGASNELG
HHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCCH
EFESGVTARLFGLVPAVVVGGCATLAVTAAWMRLFPALTHMRSFPHSAREPHPAAAPDSN
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DSGAAPAAAPKETSR
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA