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The map label for this gene is dctM5 [C]

Identifier: 119898810

GI number: 119898810

Start: 2785687

End: 2787012

Strand: Reverse

Name: dctM5 [C]

Synonym: azo2519

Alternate gene names: 119898810

Gene position: 2787012-2785687 (Counterclockwise)

Preceding gene: 119898811

Following gene: 119898808

Centisome position: 63.69

GC content: 66.59

Gene sequence:

>1326_bases
ATGACCGGAACCACGATCGGCCTGACCATGGGCGTGGTGATGATGGGCATGCTGGCGCTGCGGGTGCAGATCGGCATTGC
CATGTTCCTCACCGGCGCCATCGGCTACGTGTGGGTGTCGGGCTGGGACCCGCTGCTCGCGTATCTGAAGAACGCGCCCT
ACGGCCGCTTCTCGCTGTACGACCTGTCGGTGGTGCCGCTCTTCCTGCTGATGGGGCAGTTCGCCACCCACGGCGGGCTG
TCGCGCGCGCTGTTCAAGGCGGGCAACGCCTTCATCGGCCACTGGAAAGGCGGCATGGCGATGGCGGGCGTTGCGTCCTG
CGCGGGCTTCGGGGCGATCTGCGGCTCCTCGCTGGCCACCGCGGCGACGATGAGCCATGTGGTGCTGCCGGAGCTGAAGC
GCCACCAGTACAAGCCCGGCCTTGCCACCGGCTCGCTCGCCGCGGGCGGCACGCTCGGCATCCTGATCCCGCCCTCGGTG
CCGCTGGTGATCTACGCTATCCTGGCCGAGCAGAACATCGCCAAGCTGTTCCTGGCCGCCTTCGTGCCGGGCATCCTGGC
GGCGATCGGCTACATGGTGGTGATCGCCATCGTCACCCGGCTGGACCCGGAAGCGGGCGGCCCCGGCACGCCGAAGCACA
GCTGGCGCGAGCGCATCTCCACGGTCATCGACACCTGGCCGGTGCTGCTGATCTTCACCGTGGTGATCGGCGGCATCTAC
AGCGGCCTCTTCACCCCGACCGAAGCGGCGGCGGTGGGCGTCATCGCCACCGGCATCGCGGCGTGGAAGTCCGGCGGGCT
GAAGGGCGAAGGGCTGATGCAGTGCATCTACGGCACCGCCACCGGCACCGGCATGATGTTCCTGATCCTGCTCGGCGCAG
ACATGCTCAACTCCTTCATGGCGGTCAGCCAGATGCCCGCCGAAGCCGCGGCGTGGGTGGAGAGCATGGGCTTCGGCCCC
TTCACGGTGCTGTTCGCGATCATCGTGATCTACCTGCTGCTGGGCTGCGTGATGGACAGCCTGTCGATGATCCTGCTGAC
CGTGCCGATCTTCCTGCCGATCATCCTGGGCATGGATTACTTCGGCCTGGGCCTGGAAGAGAAGGCGATCTGGTTCGGCA
TGGTGGCGCTGGTGGTGATGGAGATCGGCCTGATCACGCCGCCGGTGGGGATGAACGTCTACATCATCAGCGGCGTCGCC
AAGGACATCCCGATGGCGACGATCTTCCGCGGCGTGATGCCCTTCCTCGCCTCGGACATCGCCCGCATCTTCATGCTGGT
GTTCTTCCCCAGCATCTCGCTGGTGGCGTTGCGCGTGTTCAGCTAG

Upstream 100 bases:

>100_bases
CGGTGTGGTGGGGCTACATCCCGGTGGTGCCGTCCTTCGTGCTGCTGGGCATTGCCGCGCTGCAGACCTTCCTGCTTGAA
CTGACTTCGGAGAGCCGCTC

Downstream 100 bases:

>100_bases
CCGCGCGGCGCGCAGGAGGATGGGAAAAAAAGGGCGGTGCCTGCGGGTGCCGCCCTTTTTGTTTGCGCAGGCGGCACAGG
CGGAAGCGTGGCTCCGGCGA

Product: TRAP-type C4 dicarboxylate transport system large permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MTGTTIGLTMGVVMMGMLALRVQIGIAMFLTGAIGYVWVSGWDPLLAYLKNAPYGRFSLYDLSVVPLFLLMGQFATHGGL
SRALFKAGNAFIGHWKGGMAMAGVASCAGFGAICGSSLATAATMSHVVLPELKRHQYKPGLATGSLAAGGTLGILIPPSV
PLVIYAILAEQNIAKLFLAAFVPGILAAIGYMVVIAIVTRLDPEAGGPGTPKHSWRERISTVIDTWPVLLIFTVVIGGIY
SGLFTPTEAAAVGVIATGIAAWKSGGLKGEGLMQCIYGTATGTGMMFLILLGADMLNSFMAVSQMPAEAAAWVESMGFGP
FTVLFAIIVIYLLLGCVMDSLSMILLTVPIFLPIILGMDYFGLGLEEKAIWFGMVALVVMEIGLITPPVGMNVYIISGVA
KDIPMATIFRGVMPFLASDIARIFMLVFFPSISLVALRVFS

Sequences:

>Translated_441_residues
MTGTTIGLTMGVVMMGMLALRVQIGIAMFLTGAIGYVWVSGWDPLLAYLKNAPYGRFSLYDLSVVPLFLLMGQFATHGGL
SRALFKAGNAFIGHWKGGMAMAGVASCAGFGAICGSSLATAATMSHVVLPELKRHQYKPGLATGSLAAGGTLGILIPPSV
PLVIYAILAEQNIAKLFLAAFVPGILAAIGYMVVIAIVTRLDPEAGGPGTPKHSWRERISTVIDTWPVLLIFTVVIGGIY
SGLFTPTEAAAVGVIATGIAAWKSGGLKGEGLMQCIYGTATGTGMMFLILLGADMLNSFMAVSQMPAEAAAWVESMGFGP
FTVLFAIIVIYLLLGCVMDSLSMILLTVPIFLPIILGMDYFGLGLEEKAIWFGMVALVVMEIGLITPPVGMNVYIISGVA
KDIPMATIFRGVMPFLASDIARIFMLVFFPSISLVALRVFS
>Mature_440_residues
TGTTIGLTMGVVMMGMLALRVQIGIAMFLTGAIGYVWVSGWDPLLAYLKNAPYGRFSLYDLSVVPLFLLMGQFATHGGLS
RALFKAGNAFIGHWKGGMAMAGVASCAGFGAICGSSLATAATMSHVVLPELKRHQYKPGLATGSLAAGGTLGILIPPSVP
LVIYAILAEQNIAKLFLAAFVPGILAAIGYMVVIAIVTRLDPEAGGPGTPKHSWRERISTVIDTWPVLLIFTVVIGGIYS
GLFTPTEAAAVGVIATGIAAWKSGGLKGEGLMQCIYGTATGTGMMFLILLGADMLNSFMAVSQMPAEAAAWVESMGFGPF
TVLFAIIVIYLLLGCVMDSLSMILLTVPIFLPIILGMDYFGLGLEEKAIWFGMVALVVMEIGLITPPVGMNVYIISGVAK
DIPMATIFRGVMPFLASDIARIFMLVFFPSISLVALRVFS

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=429, Percent_Identity=27.039627039627, Blast_Score=122, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 46444; Mature: 46312

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTTIGLTMGVVMMGMLALRVQIGIAMFLTGAIGYVWVSGWDPLLAYLKNAPYGRFSLY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCCCEEEH
DLSVVPLFLLMGQFATHGGLSRALFKAGNAFIGHWKGGMAMAGVASCAGFGAICGSSLAT
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
AATMSHVVLPELKRHQYKPGLATGSLAAGGTLGILIPPSVPLVIYAILAEQNIAKLFLAA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
FVPGILAAIGYMVVIAIVTRLDPEAGGPGTPKHSWRERISTVIDTWPVLLIFTVVIGGIY
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLFTPTEAAAVGVIATGIAAWKSGGLKGEGLMQCIYGTATGTGMMFLILLGADMLNSFM
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AVSQMPAEAAAWVESMGFGPFTVLFAIIVIYLLLGCVMDSLSMILLTVPIFLPIILGMDY
HHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FGLGLEEKAIWFGMVALVVMEIGLITPPVGMNVYIISGVAKDIPMATIFRGVMPFLASDI
HCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHCHHHHHHHHHHHHHHHHH
ARIFMLVFFPSISLVALRVFS
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGTTIGLTMGVVMMGMLALRVQIGIAMFLTGAIGYVWVSGWDPLLAYLKNAPYGRFSLY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCCCEEEH
DLSVVPLFLLMGQFATHGGLSRALFKAGNAFIGHWKGGMAMAGVASCAGFGAICGSSLAT
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
AATMSHVVLPELKRHQYKPGLATGSLAAGGTLGILIPPSVPLVIYAILAEQNIAKLFLAA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
FVPGILAAIGYMVVIAIVTRLDPEAGGPGTPKHSWRERISTVIDTWPVLLIFTVVIGGIY
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLFTPTEAAAVGVIATGIAAWKSGGLKGEGLMQCIYGTATGTGMMFLILLGADMLNSFM
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AVSQMPAEAAAWVESMGFGPFTVLFAIIVIYLLLGCVMDSLSMILLTVPIFLPIILGMDY
HHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FGLGLEEKAIWFGMVALVVMEIGLITPPVGMNVYIISGVAKDIPMATIFRGVMPFLASDI
HCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHCHHHHHHHHHHHHHHHHH
ARIFMLVFFPSISLVALRVFS
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]