| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yjcG [C]
Identifier: 119898700
GI number: 119898700
Start: 2657913
End: 2659973
Strand: Reverse
Name: yjcG [C]
Synonym: azo2409
Alternate gene names: 119898700
Gene position: 2659973-2657913 (Counterclockwise)
Preceding gene: 119898701
Following gene: 119898697
Centisome position: 60.78
GC content: 68.41
Gene sequence:
>2061_bases ATGAACACGGGCGCCTTCTCGCGCCGGCTGCGGCGCTATTACGGCTGGTACACCGGCACCTTTGCGCTGTTCGTGCTGCT GCTCGCGGTCGGCGAGCAGTTTGGCCTGTCGCAGCGCGCCATCGGCCACATCTTCCTGTTCGTCACGATCGCCATCTATG CCGGCATCGGCGTGATGAGCCGCACCTCCGACGTGTCCGAATACTACGTCGCCGGACGCCGGGTGCCGGCGGTGTTCAAC GGCATGGCCACCGCCGCCGACTGGATGAGCGCGGCGTCCTTCATCGGCCTGGCCGGCACGCTGTACTTCAGCGGCTTCGA GGGGCTGGCCTTCGTCACCGGGTGGACCGGCGGGTTCGTGCTGGTGGCGCTACTGCTCGCGCCTTACCTGCGCAAGTTCG GCCAGTACACCATCCCCGACTTCCTCGGCGCCCGCTACGAGGGCGACTTCGCCCGTCTGGTCGGCATCGGGGCCACGGTG CTGGCGAGCTTCGTCTACCTCGTCGCGCAGATCTATGGCGTCGGCCTTGTCACCAGCCGCTTCGTCAGCGTCGAGTTCGA GATCGGTCTCTTCGTCGGGCTGGCGGGCATCCTGGTGTGTTCCTTTCTCGGCGGCATGCGTGCAGTCACCTGGACCCAGG TGGCGCAGTACCTGATCCTGATCATCGCCTACCTGGTGCCGGTGATGATCCTGTCGTACAAGGTGACGGGCGTACCGGCG CCGCAGGTGATGTACGGCGGGGTGCTGGCCAAGCTGACCGAGCGCGAGGCCGAACTCGAGGTGGAGCCGGCCGAAAATGC CGTGCGGGCGCTGTACCACAAGCGCGCCGACGACTACGCCGCCAAGGTCGCGGCGCTGCCGGAATCGCTTGAAACCGAAC GCCGCGCGCTGATCGACCGGCTGAACGAACTGCGCCTGGACAACGCCTCCGCGCGCGACATCGCGCTGACCGAGCGCGCG TTGCGCGATCTGCCGCGCACTCCGGCCGACGCCGCGGTGCGCTGGGAGCGGGCGCGCGCCGAGGCGCTGGAGAAGGCCCA GCCCCCGCCGCGCCACGCGGAGGCGCACCCCGGCCGCACCGCCGCGGAGTCGCAGGCGGCGCGCAACAACTTCCTCGCGC TGGTGTTCGTACTGATGGTGGGCACCGCCGCGCTGCCCCACATCCTTGCGCGCTACTACACCACGCCGGGCGTGGTGGCG GCGCGGCGCTCGGTGTTCTGGTCGCTGCTGTTCATCTTCCTGCTCTATGTCACCGCGCCGGCCTATGCGGTGTTCGCCAA ATGGGAGATCTACAACAGCGTGATCGGCTCCAGCCTGTCGATCCTGCCGGGGTGGGTAGCCTCATGGGGCAAGGTGGGGC TGGTGCGGATCGAGGACATCAACGGCGACGGCATCCTGCAACTCGCCGAACTCAGCATCAATACCGACGTGATCATGCTG GCGACACCCGAAATCGCGGGGCTGCCCTACGTGGTGTCCGGGCTGGTCGCCGCCGGCGGCCTCGCCGCGGCGCTGTCCAC CGCCGACGGCCTGTTGCTGACCATCTCCAACGCGCTGTCGCACGACCTTTACTACAAGGTCATCAACCCGCATGCCACCA CGCACCGCCGGCTGGTGATCTCGAAGTCGCAGCTGCTGGTGGTGGCGGTGGTCGCGGCCTGGGTCGCGTCGATGCGGCCG GACAACATCCTGTTCATGGTCGGGCTGGCGTTCTCGATCGGCGCCGCGGCCTTCTTCCCGGCGCTGGTGCTGGGCATCTT CTGGAAGCGGGCCAACCGTCCCGGCGCGGTGTGCGGCATGCTGGCCGGCCTGGGCGTCACGCTGTTCTACGCGGTGCGCA CCCATCCCTTCTTCGGCGGGTCGATGGCCCACGCGTGGTTCGACATCAACCCGATCTCGGCCGGGGTATTCGGCGTGCCG CTGGGTTTCGTCATCATCATCGTGGTCAGCCTGCTGACGCCGCCGCCGCCGCGCGAAATCCAGGCGCTGGTGGACTACGT GCGCTATCCGCAATTGCCCACGGGCGCCGACGAGGGCGAGACCGAGAGCGGCCGCGCCTGA
Upstream 100 bases:
>100_bases ACGCTGCGCGAGGCGCGCGAGGCGGCGGAAAAGTCGTACTACGCCCGGATCAAGTATTGATGGCCGGCAGCCCCTGCAAC CCGCCGCGCCGAGGGCGCGC
Downstream 100 bases:
>100_bases GCCCGACGCCGCATTACACCGCGGTGGCGCTGACGATGCGGGCGCGCCCCTGCGCCTTCGCCTGGTAAAGCGCAAGGTCG GCCGAGCGCAGCAAGTGGGC
Product: putative sodium:solute sympoter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MNTGAFSRRLRRYYGWYTGTFALFVLLLAVGEQFGLSQRAIGHIFLFVTIAIYAGIGVMSRTSDVSEYYVAGRRVPAVFN GMATAADWMSAASFIGLAGTLYFSGFEGLAFVTGWTGGFVLVALLLAPYLRKFGQYTIPDFLGARYEGDFARLVGIGATV LASFVYLVAQIYGVGLVTSRFVSVEFEIGLFVGLAGILVCSFLGGMRAVTWTQVAQYLILIIAYLVPVMILSYKVTGVPA PQVMYGGVLAKLTEREAELEVEPAENAVRALYHKRADDYAAKVAALPESLETERRALIDRLNELRLDNASARDIALTERA LRDLPRTPADAAVRWERARAEALEKAQPPPRHAEAHPGRTAAESQAARNNFLALVFVLMVGTAALPHILARYYTTPGVVA ARRSVFWSLLFIFLLYVTAPAYAVFAKWEIYNSVIGSSLSILPGWVASWGKVGLVRIEDINGDGILQLAELSINTDVIML ATPEIAGLPYVVSGLVAAGGLAAALSTADGLLLTISNALSHDLYYKVINPHATTHRRLVISKSQLLVVAVVAAWVASMRP DNILFMVGLAFSIGAAAFFPALVLGIFWKRANRPGAVCGMLAGLGVTLFYAVRTHPFFGGSMAHAWFDINPISAGVFGVP LGFVIIIVVSLLTPPPPREIQALVDYVRYPQLPTGADEGETESGRA
Sequences:
>Translated_686_residues MNTGAFSRRLRRYYGWYTGTFALFVLLLAVGEQFGLSQRAIGHIFLFVTIAIYAGIGVMSRTSDVSEYYVAGRRVPAVFN GMATAADWMSAASFIGLAGTLYFSGFEGLAFVTGWTGGFVLVALLLAPYLRKFGQYTIPDFLGARYEGDFARLVGIGATV LASFVYLVAQIYGVGLVTSRFVSVEFEIGLFVGLAGILVCSFLGGMRAVTWTQVAQYLILIIAYLVPVMILSYKVTGVPA PQVMYGGVLAKLTEREAELEVEPAENAVRALYHKRADDYAAKVAALPESLETERRALIDRLNELRLDNASARDIALTERA LRDLPRTPADAAVRWERARAEALEKAQPPPRHAEAHPGRTAAESQAARNNFLALVFVLMVGTAALPHILARYYTTPGVVA ARRSVFWSLLFIFLLYVTAPAYAVFAKWEIYNSVIGSSLSILPGWVASWGKVGLVRIEDINGDGILQLAELSINTDVIML ATPEIAGLPYVVSGLVAAGGLAAALSTADGLLLTISNALSHDLYYKVINPHATTHRRLVISKSQLLVVAVVAAWVASMRP DNILFMVGLAFSIGAAAFFPALVLGIFWKRANRPGAVCGMLAGLGVTLFYAVRTHPFFGGSMAHAWFDINPISAGVFGVP LGFVIIIVVSLLTPPPPREIQALVDYVRYPQLPTGADEGETESGRA >Mature_686_residues MNTGAFSRRLRRYYGWYTGTFALFVLLLAVGEQFGLSQRAIGHIFLFVTIAIYAGIGVMSRTSDVSEYYVAGRRVPAVFN GMATAADWMSAASFIGLAGTLYFSGFEGLAFVTGWTGGFVLVALLLAPYLRKFGQYTIPDFLGARYEGDFARLVGIGATV LASFVYLVAQIYGVGLVTSRFVSVEFEIGLFVGLAGILVCSFLGGMRAVTWTQVAQYLILIIAYLVPVMILSYKVTGVPA PQVMYGGVLAKLTEREAELEVEPAENAVRALYHKRADDYAAKVAALPESLETERRALIDRLNELRLDNASARDIALTERA LRDLPRTPADAAVRWERARAEALEKAQPPPRHAEAHPGRTAAESQAARNNFLALVFVLMVGTAALPHILARYYTTPGVVA ARRSVFWSLLFIFLLYVTAPAYAVFAKWEIYNSVIGSSLSILPGWVASWGKVGLVRIEDINGDGILQLAELSINTDVIML ATPEIAGLPYVVSGLVAAGGLAAALSTADGLLLTISNALSHDLYYKVINPHATTHRRLVISKSQLLVVAVVAAWVASMRP DNILFMVGLAFSIGAAAFFPALVLGIFWKRANRPGAVCGMLAGLGVTLFYAVRTHPFFGGSMAHAWFDINPISAGVFGVP LGFVIIIVVSLLTPPPPREIQALVDYVRYPQLPTGADEGETESGRA
Specific function: Unknown
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=221, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=2e-12, Organism=Escherichia coli, GI1790503, Length=177, Percent_Identity=31.0734463276836, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR019899 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 74121; Mature: 74121
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS00018 EF_HAND_1 ; PS00457 NA_SOLUT_SYMP_2 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTGAFSRRLRRYYGWYTGTFALFVLLLAVGEQFGLSQRAIGHIFLFVTIAIYAGIGVMS CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHH RTSDVSEYYVAGRRVPAVFNGMATAADWMSAASFIGLAGTLYFSGFEGLAFVTGWTGGFV CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHH LVALLLAPYLRKFGQYTIPDFLGARYEGDFARLVGIGATVLASFVYLVAQIYGVGLVTSR HHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVSVEFEIGLFVGLAGILVCSFLGGMRAVTWTQVAQYLILIIAYLVPVMILSYKVTGVPA HEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PQVMYGGVLAKLTEREAELEVEPAENAVRALYHKRADDYAAKVAALPESLETERRALIDR CHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH LNELRLDNASARDIALTERALRDLPRTPADAAVRWERARAEALEKAQPPPRHAEAHPGRT HHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AAESQAARNNFLALVFVLMVGTAALPHILARYYTTPGVVAARRSVFWSLLFIFLLYVTAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC AYAVFAKWEIYNSVIGSSLSILPGWVASWGKVGLVRIEDINGDGILQLAELSINTDVIML HHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEE ATPEIAGLPYVVSGLVAAGGLAAALSTADGLLLTISNALSHDLYYKVINPHATTHRRLVI ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHEEEEECCCCCCCCEEEE SKSQLLVVAVVAAWVASMRPDNILFMVGLAFSIGAAAFFPALVLGIFWKRANRPGAVCGM ECCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LAGLGVTLFYAVRTHPFFGGSMAHAWFDINPISAGVFGVPLGFVIIIVVSLLTPPPPREI HHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH QALVDYVRYPQLPTGADEGETESGRA HHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNTGAFSRRLRRYYGWYTGTFALFVLLLAVGEQFGLSQRAIGHIFLFVTIAIYAGIGVMS CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHH RTSDVSEYYVAGRRVPAVFNGMATAADWMSAASFIGLAGTLYFSGFEGLAFVTGWTGGFV CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHH LVALLLAPYLRKFGQYTIPDFLGARYEGDFARLVGIGATVLASFVYLVAQIYGVGLVTSR HHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVSVEFEIGLFVGLAGILVCSFLGGMRAVTWTQVAQYLILIIAYLVPVMILSYKVTGVPA HEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PQVMYGGVLAKLTEREAELEVEPAENAVRALYHKRADDYAAKVAALPESLETERRALIDR CHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH LNELRLDNASARDIALTERALRDLPRTPADAAVRWERARAEALEKAQPPPRHAEAHPGRT HHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AAESQAARNNFLALVFVLMVGTAALPHILARYYTTPGVVAARRSVFWSLLFIFLLYVTAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC AYAVFAKWEIYNSVIGSSLSILPGWVASWGKVGLVRIEDINGDGILQLAELSINTDVIML HHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEE ATPEIAGLPYVVSGLVAAGGLAAALSTADGLLLTISNALSHDLYYKVINPHATTHRRLVI ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHEEEEECCCCCCCCEEEE SKSQLLVVAVVAAWVASMRPDNILFMVGLAFSIGAAAFFPALVLGIFWKRANRPGAVCGM ECCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LAGLGVTLFYAVRTHPFFGGSMAHAWFDINPISAGVFGVPLGFVIIIVVSLLTPPPPREI HHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH QALVDYVRYPQLPTGADEGETESGRA HHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1356967 [H]