BacMap

Definition	Azoarcus sp. BH72 chromosome, complete genome.
Accession	NC_008702
Length	4,376,040

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The map label for this gene is cbiO [C]

Identifier: 119898513

GI number: 119898513

Start: 2435203

End: 2435838

Strand: Direct

Name: cbiO [C]

Synonym: azo2222

Alternate gene names: 119898513

Gene position: 2435203-2435838 (Clockwise)

Preceding gene: 119898512

Following gene: 119898514

Centisome position: 55.65

GC content: 75.31

Gene sequence:

>636_bases
TTGATCGAAGGGCGCGGCCTGCACCTGGCGCGCGAAGGCCGCACGGTGATCGCCGCCCTGGATCTCGTCCTCGACGCGGG
CGAACGGCTCTTCGTGCTCGGCCCCAGCGGCGCGGGCAAGACCACGCTGCTGCACGCGCTGCTCGGCTTCGTCCCGCTGG
CTGCGGGCACGCTTGCGGTATTTGGCGAGGCGCGTCGGTGCGAGCGCGACTTCATCCCGCTGCGCGGCCCGCTGGGGCTG
TTGTTCCAGGACCCCGGCGACCAGCTCTTCGGCCCCACCGTGGCCGAGGACGTCGCCTTCGGCCCGCTCAACCTCGGCCT
CGCACCCGCCCAGGCGGCGGCGCGCGCGGAGGCTACGCTCGCGGCGCTCGACATCGCCCACCTCGCGGCGCGGCCGGTGC
ACGCCTTGTCGGGCGGCGAGCAGCGGCTGGCGGCGCTGGCCGGGGTGCTGGCGATGGCCCCGCGCGTGCTGCTGCTCGAC
GAGCCGACCAACGGCCTGGATGCCGATGCGAGCGCGCGCGTGCTCGCGGCACTGGCGCAAACCGGCCTGCCCATGGTCGT
CGCCTCGCACGACCCGGCCTGCATCGAGGCCCTCGCCACGCGCGTGCTCGAACTCCCCGCGCGGCCTTCGGCCTAG

Upstream 100 bases:

>100_bases
GGCGCCGCCACCGCGTGCTGCCTGCTGTGGTTGATGTTGTGACGCGGGCACGCAGCGGCCCTCGTCACCCCGGCGGCGGG
GCAGACCGTTGAGCGGGCCC

Downstream 100 bases:

>100_bases
CGCCCCGGGCGCGCTATAGTCGGGGCTGTTCCAGCCCGCTGCCGCCCGATGCCCCACGCCCTGCACGCCGTCCGCGGCGA
AATCCTGCACTTCCTCGCGG

Product: putative cobalt transport system ATP-binding protein

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MIEGRGLHLAREGRTVIAALDLVLDAGERLFVLGPSGAGKTTLLHALLGFVPLAAGTLAVFGEARRCERDFIPLRGPLGL
LFQDPGDQLFGPTVAEDVAFGPLNLGLAPAQAAARAEATLAALDIAHLAARPVHALSGGEQRLAALAGVLAMAPRVLLLD
EPTNGLDADASARVLAALAQTGLPMVVASHDPACIEALATRVLELPARPSA

Sequences:

>Translated_211_residues
MIEGRGLHLAREGRTVIAALDLVLDAGERLFVLGPSGAGKTTLLHALLGFVPLAAGTLAVFGEARRCERDFIPLRGPLGL
LFQDPGDQLFGPTVAEDVAFGPLNLGLAPAQAAARAEATLAALDIAHLAARPVHALSGGEQRLAALAGVLAMAPRVLLLD
EPTNGLDADASARVLAALAQTGLPMVVASHDPACIEALATRVLELPARPSA
>Mature_211_residues
MIEGRGLHLAREGRTVIAALDLVLDAGERLFVLGPSGAGKTTLLHALLGFVPLAAGTLAVFGEARRCERDFIPLRGPLGL
LFQDPGDQLFGPTVAEDVAFGPLNLGLAPAQAAARAEATLAALDIAHLAARPVHALSGGEQRLAALAGVLAMAPRVLLLD
EPTNGLDADASARVLAALAQTGLPMVVASHDPACIEALATRVLELPARPSA

Specific function: Part Of The Binding-Protein-Dependent Transport System For Arginine. Probably Responsible For Energy Coupling To The Transport System. [C]

COG id: COG1122

COG function: function code P; ABC-type cobalt transport system, ATPase component

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9955963, Length=186, Percent_Identity=30.1075268817204, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI42741659, Length=200, Percent_Identity=29.5, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI4505771, Length=188, Percent_Identity=29.2553191489362, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI11967969, Length=200, Percent_Identity=31.5, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI9961250, Length=188, Percent_Identity=29.2553191489362, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI9961252, Length=188, Percent_Identity=29.2553191489362, Blast_Score=70, Evalue=9e-13,
Organism=Homo sapiens, GI171184400, Length=208, Percent_Identity=28.3653846153846, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI105990541, Length=193, Percent_Identity=30.0518134715026, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI116734710, Length=178, Percent_Identity=31.4606741573034, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1787089, Length=205, Percent_Identity=36.5853658536585, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI1787029, Length=211, Percent_Identity=32.7014218009479, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI1788225, Length=214, Percent_Identity=35.5140186915888, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1786563, Length=204, Percent_Identity=35.2941176470588, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI87081791, Length=207, Percent_Identity=32.8502415458937, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1789672, Length=194, Percent_Identity=30.9278350515464, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787712, Length=191, Percent_Identity=30.8900523560209, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787370, Length=205, Percent_Identity=31.7073170731707, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI87081709, Length=199, Percent_Identity=31.6582914572864, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1790467, Length=200, Percent_Identity=32.5, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI1786253, Length=188, Percent_Identity=34.5744680851064, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788761, Length=203, Percent_Identity=35.4679802955665, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786319, Length=183, Percent_Identity=30.6010928961749, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1789873, Length=199, Percent_Identity=31.1557788944724, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1789593, Length=196, Percent_Identity=30.6122448979592, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI1787758, Length=193, Percent_Identity=30.0518134715026, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789891, Length=210, Percent_Identity=30.4761904761905, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1787500, Length=200, Percent_Identity=28, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1786872, Length=178, Percent_Identity=33.1460674157303, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788644, Length=216, Percent_Identity=32.8703703703704, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788506, Length=198, Percent_Identity=28.2828282828283, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI87082267, Length=200, Percent_Identity=29.5, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786975, Length=202, Percent_Identity=28.7128712871287, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1790544, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=6e-13,
Organism=Escherichia coli, GI1787105, Length=196, Percent_Identity=30.6122448979592, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI87081834, Length=198, Percent_Identity=31.8181818181818, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI145693107, Length=207, Percent_Identity=30.9178743961353, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789962, Length=207, Percent_Identity=29.951690821256, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1786803, Length=208, Percent_Identity=32.6923076923077, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790739, Length=185, Percent_Identity=34.0540540540541, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1786703, Length=190, Percent_Identity=32.1052631578947, Blast_Score=61, Evalue=4e-11,
Organism=Escherichia coli, GI1787792, Length=212, Percent_Identity=27.8301886792453, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI1786345, Length=195, Percent_Identity=31.7948717948718, Blast_Score=61, Evalue=6e-11,
Organism=Escherichia coli, GI1790190, Length=177, Percent_Identity=27.683615819209, Blast_Score=60, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=204, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17567265, Length=193, Percent_Identity=30.0518134715026, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=188, Percent_Identity=29.2553191489362, Blast_Score=71, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193211017, Length=190, Percent_Identity=31.0526315789474, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=190, Percent_Identity=31.0526315789474, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17541710, Length=189, Percent_Identity=29.1005291005291, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71996809, Length=187, Percent_Identity=28.3422459893048, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17567269, Length=181, Percent_Identity=30.939226519337, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115533592, Length=195, Percent_Identity=29.7435897435897, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=198, Percent_Identity=26.7676767676768, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI28574744, Length=192, Percent_Identity=31.7708333333333, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24581191, Length=191, Percent_Identity=27.7486910994764, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24581189, Length=191, Percent_Identity=27.7486910994764, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24581193, Length=191, Percent_Identity=27.7486910994764, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24581195, Length=191, Percent_Identity=27.7486910994764, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24659289, Length=194, Percent_Identity=31.4432989690722, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19920532, Length=191, Percent_Identity=29.8429319371728, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24580930, Length=191, Percent_Identity=29.8429319371728, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21357907, Length=173, Percent_Identity=30.0578034682081, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI85724864, Length=189, Percent_Identity=26.984126984127, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24580555, Length=189, Percent_Identity=26.984126984127, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85816269, Length=189, Percent_Identity=26.984126984127, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24580553, Length=189, Percent_Identity=26.984126984127, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24641342, Length=176, Percent_Identity=30.1136363636364, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24641565, Length=182, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI17136662, Length=205, Percent_Identity=27.3170731707317, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI85726357, Length=184, Percent_Identity=27.1739130434783, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 21599; Mature: 21599

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEGRGLHLAREGRTVIAALDLVLDAGERLFVLGPSGAGKTTLLHALLGFVPLAAGTLAV
CCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
FGEARRCERDFIPLRGPLGLLFQDPGDQLFGPTVAEDVAFGPLNLGLAPAQAAARAEATL
HHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHH
AALDIAHLAARPVHALSGGEQRLAALAGVLAMAPRVLLLDEPTNGLDADASARVLAALAQ
HHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHH
TGLPMVVASHDPACIEALATRVLELPARPSA
CCCCEEEECCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIEGRGLHLAREGRTVIAALDLVLDAGERLFVLGPSGAGKTTLLHALLGFVPLAAGTLAV
CCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
FGEARRCERDFIPLRGPLGLLFQDPGDQLFGPTVAEDVAFGPLNLGLAPAQAAARAEATL
HHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHH
AALDIAHLAARPVHALSGGEQRLAALAGVLAMAPRVLLLDEPTNGLDADASARVLAALAQ
HHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHH
TGLPMVVASHDPACIEALATRVLELPARPSA
CCCCEEEECCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]