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The map label for this gene is trg [H]

Identifier: 119898462

GI number: 119898462

Start: 2378890

End: 2380518

Strand: Direct

Name: trg [H]

Synonym: azo2171

Alternate gene names: 119898462

Gene position: 2378890-2380518 (Clockwise)

Preceding gene: 119898461

Following gene: 119898480

Centisome position: 54.36

GC content: 66.11

Gene sequence:

>1629_bases
ATGCAGTGGCTGGACAACCTGAGCCTACAAGCGAAACTCATCGTTAATTTCGCCGTTTCCGGCGGCGTCTTCGTCGTCGC
CATCGTGGTCTGTCTGTGGCAGATCGACCGCATGAGCGCCGATACCGAGCACATCACGCGCAACTGGCTCCCGTCCATCG
TCCAGGTGGAAAAGATGAGCCGGGAGCGTTTGCGCTATCGCGTGCGCAGCCTCGAATACCTGCTGCCCGGCACAGCGGAG
GACCGGACAAAACTCGGCGCGTCGCTCGGATCGCTGGAGTCGAGCGTGACGCAGTCGATCGCCGACTACCGCCCCCTGGT
CGCCTCGCCGGAAGAGCAGAAGTTGCTCGACGACGTGGCCCGCTTTGCCGAGCAGTACCGCCAGTCGGTGGCAAAGGCGG
TGGCGTTGGTACAGGCGGGTGACGAAGAAGGTGCGCAAAACCTGCGACGGACCGAATGGGTGAAGGAAGCGGACCAGTTG
CGCGACGCGCTTGCGGCCCTGACCAAGCTCAACGTGGAGGGCGCCGCCGCGGACGGCGCAAACGCGCAGGCAACCACCCG
CGCCGCGAAAACCTACGGCATCGCAGCGCTCATCATCGGCGTCGTCGTCGCGGCCCTCACCTCGTGGCTGATGGCCCGGC
GCATGGGGCTTCAACTGCGCTCGGTGGTGGATGCGGCGGGCAGGATTGCCAAGGGCGACCTGCGGACGCCCCTCCCCGCC
GCGAGCCGCGACGAGGTCGGACAACTCGTGCGCGCAATGGCCAACATGCAGGACGCACTGCATTCCACCCTGAAACAGAC
CAGCGAGAACGCCAGCGAACTCTCGGCGACAGCGCGCGAACTCGGTGACGGCGTCGCCAGCATGCAGCGCAACGTCGCCC
TGCAGGGCTCCGCCTCATCGTCGATCGCCGCCACGGTGGAAGAACTCACGGTGTCGATCAAGCATGTTTCCGAAAACACC
GGTGACGCCAGCCGACTGGCCCAGGACTCCGACCGCCAGGCGCGTGAGGGACGTTCCACGGTGGACAAGCTGATCGAGGA
GATCAACCGCGTCTCCGAAGTGGTCACCGTGGCATCACAGCGAATCGGCGGACTGGAAAGCGCGTCGCAGAAGATTTCCA
ACATCGTCCAGGTCATCAAGGAGATTGCCGAGCAGACCAATCTGCTCGCCCTCAACGCCGCGATCGAGGCCGCCCGCGCA
GGCGAGCACGGACGCGGGTTCGCCGTCGTCGCAGACGAGGTCCGCAAGCTGTCGGAGCGGACCTCCCACTCCACGGGCGA
GATCACCGGCATGGTCAACGAAATCCAGGACTCGACCCGCCAGGCCGTTGCCGGCATCGACGAAGGGGTTGCGGCCGTGA
CGAACAGCGTGGGCCATGCGCGCCTCGCCGGCGAAACCATAGGCGCGCTGCAGGACATCGCACGGCGCGTCGCGGACCTG
GTCGGCGAGGTCGACAACGCCCTGCGCGAGCAAGCCACCGCGTCGGCGGAGGTCGCCAAGCAGGTGGAGGAGATCAGCAG
CCATGCGGCGGAGACCGAGTCCGCAACCGCGCAGGCGCTTCACTCCGCGCAAACGCTCAACAGTGTGGCAGGCAACATGG
TCGAAACGGTCCGGCGCTTCCACCTGTAG

Upstream 100 bases:

>100_bases
CTCAAGCTGACCGCCCGCCTGCCGTTACATCACGCAATGCAGTGCCCGCCGAGGCTGGCAAGACGGCGCAGCATTCCACA
ATCACAACGCGGAGACAGGC

Downstream 100 bases:

>100_bases
CGCTCGGATACGCGCGGCTTACGTCCGCGAGTGGACAAAAAAAGGCCCGCTTTCGCGGGCCTTTTGCTTACGACGCTGCT
GCAGCGATCAGATGCGTTCC

Product: putative ribose and galactose chemoreceptor protein

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MQWLDNLSLQAKLIVNFAVSGGVFVVAIVVCLWQIDRMSADTEHITRNWLPSIVQVEKMSRERLRYRVRSLEYLLPGTAE
DRTKLGASLGSLESSVTQSIADYRPLVASPEEQKLLDDVARFAEQYRQSVAKAVALVQAGDEEGAQNLRRTEWVKEADQL
RDALAALTKLNVEGAAADGANAQATTRAAKTYGIAALIIGVVVAALTSWLMARRMGLQLRSVVDAAGRIAKGDLRTPLPA
ASRDEVGQLVRAMANMQDALHSTLKQTSENASELSATARELGDGVASMQRNVALQGSASSSIAATVEELTVSIKHVSENT
GDASRLAQDSDRQAREGRSTVDKLIEEINRVSEVVTVASQRIGGLESASQKISNIVQVIKEIAEQTNLLALNAAIEAARA
GEHGRGFAVVADEVRKLSERTSHSTGEITGMVNEIQDSTRQAVAGIDEGVAAVTNSVGHARLAGETIGALQDIARRVADL
VGEVDNALREQATASAEVAKQVEEISSHAAETESATAQALHSAQTLNSVAGNMVETVRRFHL

Sequences:

>Translated_542_residues
MQWLDNLSLQAKLIVNFAVSGGVFVVAIVVCLWQIDRMSADTEHITRNWLPSIVQVEKMSRERLRYRVRSLEYLLPGTAE
DRTKLGASLGSLESSVTQSIADYRPLVASPEEQKLLDDVARFAEQYRQSVAKAVALVQAGDEEGAQNLRRTEWVKEADQL
RDALAALTKLNVEGAAADGANAQATTRAAKTYGIAALIIGVVVAALTSWLMARRMGLQLRSVVDAAGRIAKGDLRTPLPA
ASRDEVGQLVRAMANMQDALHSTLKQTSENASELSATARELGDGVASMQRNVALQGSASSSIAATVEELTVSIKHVSENT
GDASRLAQDSDRQAREGRSTVDKLIEEINRVSEVVTVASQRIGGLESASQKISNIVQVIKEIAEQTNLLALNAAIEAARA
GEHGRGFAVVADEVRKLSERTSHSTGEITGMVNEIQDSTRQAVAGIDEGVAAVTNSVGHARLAGETIGALQDIARRVADL
VGEVDNALREQATASAEVAKQVEEISSHAAETESATAQALHSAQTLNSVAGNMVETVRRFHL
>Mature_542_residues
MQWLDNLSLQAKLIVNFAVSGGVFVVAIVVCLWQIDRMSADTEHITRNWLPSIVQVEKMSRERLRYRVRSLEYLLPGTAE
DRTKLGASLGSLESSVTQSIADYRPLVASPEEQKLLDDVARFAEQYRQSVAKAVALVQAGDEEGAQNLRRTEWVKEADQL
RDALAALTKLNVEGAAADGANAQATTRAAKTYGIAALIIGVVVAALTSWLMARRMGLQLRSVVDAAGRIAKGDLRTPLPA
ASRDEVGQLVRAMANMQDALHSTLKQTSENASELSATARELGDGVASMQRNVALQGSASSSIAATVEELTVSIKHVSENT
GDASRLAQDSDRQAREGRSTVDKLIEEINRVSEVVTVASQRIGGLESASQKISNIVQVIKEIAEQTNLLALNAAIEAARA
GEHGRGFAVVADEVRKLSERTSHSTGEITGMVNEIQDSTRQAVAGIDEGVAAVTNSVGHARLAGETIGALQDIARRVADL
VGEVDNALREQATASAEVAKQVEEISSHAAETESATAQALHSAQTLNSVAGNMVETVRRFHL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=458, Percent_Identity=30.5676855895196, Blast_Score=152, Evalue=5e-38,
Organism=Escherichia coli, GI1788195, Length=298, Percent_Identity=35.2348993288591, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI2367378, Length=431, Percent_Identity=29.2343387470998, Blast_Score=144, Evalue=2e-35,
Organism=Escherichia coli, GI1788194, Length=328, Percent_Identity=30.1829268292683, Blast_Score=128, Evalue=1e-30,
Organism=Escherichia coli, GI1789453, Length=316, Percent_Identity=25.3164556962025, Blast_Score=92, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57936; Mature: 57936

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CC
>Mature Secondary Structure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CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]