Definition Azoarcus sp. BH72 chromosome, complete genome.
Accession NC_008702
Length 4,376,040

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The map label for this gene is ppdD [C]

Identifier: 119898379

GI number: 119898379

Start: 2294427

End: 2294819

Strand: Reverse

Name: ppdD [C]

Synonym: azo2088

Alternate gene names: 119898379

Gene position: 2294819-2294427 (Counterclockwise)

Preceding gene: 119898380

Following gene: 119898378

Centisome position: 52.44

GC content: 68.45

Gene sequence:

>393_bases
ATGACGGCATCCCGGGTGCGGCGCGGCTTCACGCTGATCGAGCTGCTGGTGGTGATGGCGATCGTCGCGCTGCTGCTGGC
GATCGCTGCGCCGCGCTACTTCGATCACGTGGAGCGCGCGCGAGAGACGAGCCTGCGCCAGTCGCTCGCGGTGATGCGTG
ATGCGCTCGACAAGTACAAGGCCGACACCGGGCGCTTTCCGCACGCATTGGCCGATCTCGTCGAGCGACGCTACCTGCGC
GCGATTCCGCGCGATCCGATCACCGACAGCGAAGCGAGCTGGATCGAAGTTGCGGAGGCGCCGGGCGCAGATGGCGAGGG
TGGCGGGGTCCGCGATGTCCGCAGCGGCGCTGAAGGCGGCGGCCTGGACGGAACACCGTATGCAGACTGGTAG

Upstream 100 bases:

>100_bases
CGCCTGAAGCCCCCGCCGCGGGTGCGGATGTTTTCGACGTCTATTCGCTCGCCGACGGCGTGGGGCTGGACGGCGTGCCC
TATCGCGAATGGTGAGCGCG

Downstream 100 bases:

>100_bases
CCTCCCTCCGCCGCGCTCCCGTCAACGCGGCTACAGCTATCTGCTGATCCTGTTCACCGTGGCCGCGCTCGGCTTCGGCA
TCGCGCAGGCTGGCGTGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: General Secretion Pathway Protein G; Methylation; Pilus Assembly Protein; General Secretion Pathway GSPG-Like Transmembrane Protein; General Secretion Pathway GSPG-Like; GSPG-Related Protein; N-Terminal Methylation Site; Pilin Domain-Containing Protein; Type II Secretion System Protein; Fimbrial Protein Pilin; Secretion Protein; Prokaryotic N-Terminal Methylation Site

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTASRVRRGFTLIELLVVMAIVALLLAIAAPRYFDHVERARETSLRQSLAVMRDALDKYKADTGRFPHALADLVERRYLR
AIPRDPITDSEASWIEVAEAPGADGEGGGVRDVRSGAEGGGLDGTPYADW

Sequences:

>Translated_130_residues
MTASRVRRGFTLIELLVVMAIVALLLAIAAPRYFDHVERARETSLRQSLAVMRDALDKYKADTGRFPHALADLVERRYLR
AIPRDPITDSEASWIEVAEAPGADGEGGGVRDVRSGAEGGGLDGTPYADW
>Mature_129_residues
TASRVRRGFTLIELLVVMAIVALLLAIAAPRYFDHVERARETSLRQSLAVMRDALDKYKADTGRFPHALADLVERRYLRA
IPRDPITDSEASWIEVAEAPGADGEGGGVRDVRSGAEGGGLDGTPYADW

Specific function: Not Yet Known. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14196; Mature: 14065

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASRVRRGFTLIELLVVMAIVALLLAIAAPRYFDHVERARETSLRQSLAVMRDALDKYK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADTGRFPHALADLVERRYLRAIPRDPITDSEASWIEVAEAPGADGEGGGVRDVRSGAEGG
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCC
GLDGTPYADW
CCCCCCCCCC
>Mature Secondary Structure 
TASRVRRGFTLIELLVVMAIVALLLAIAAPRYFDHVERARETSLRQSLAVMRDALDKYK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADTGRFPHALADLVERRYLRAIPRDPITDSEASWIEVAEAPGADGEGGGVRDVRSGAEGG
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCC
GLDGTPYADW
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA