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The map label for this gene is rutA [H]

Identifier: 119898235

GI number: 119898235

Start: 2133901

End: 2135031

Strand: Reverse

Name: rutA [H]

Synonym: azo1944

Alternate gene names: 119898235

Gene position: 2135031-2133901 (Counterclockwise)

Preceding gene: 119898236

Following gene: 119898234

Centisome position: 48.79

GC content: 66.93

Gene sequence:

>1131_bases
ATGAGCGAACGCAGCAGCGGCTTCGTGCCGCCGGTACGCAACGACAACAAGTTCAAGCTCGGCTTCTTCGCCGCCAACTG
CTCCGGCGGCATGTCGGTCACCCAGGTGCCCGAGCGCTGGCAGAACACCTGGGACAACAACTTGCGGCTGGCGAAGCTCG
CCGACGCCGCGGGCATCGAGTTCATGCTGCCGATCGCGCGCTGGATCGGCTACGGCGGCGCCACCGATTTCCACGGCAAC
GTGCTGGAGACGATGACCTGGGCCGCCGGCCTGCTGGCGCACACCCGGCACATCAACGTGTTCGCCACCATCCACACCGC
CTGCAACCACCCGGTGGTGGTCGCCAAGCAGATCGCCACCATCGACCAGATCGGCAAGGGTCGCGCCGGCCTCAACATCG
TCTGCGGCTGGAACAAGCCGGAATACGACGCGATGGGGCAGACCCTGCCGGACGACCACGACACCCGCTACCGCATGGGG
CAGGAGTGGTACGACATCATCGAGAAGCTGTGGTACGAGAGCGCGCCCTTCGACTGGGACGGCGAGTACTTCAAGCTGAA
GGGCGCCTACGGCCAGCCGCATCCGGTGGTGGACCGCGTGCCCATCTTCAACGCCGCCGGCTCCGCGCAGGGCCGCGACT
TCGCCACCCGCAACGCCGACTTCCTGTTCACTTCGGCGATCGACCTGGCGCGCTCCAGGGCGGAGATCGCCGAGATCAAG
GCCATGGCCGCCGCCAAGGGCCGCGACATCGACGTGCTGACCTTCTCCTACGTGGTGTGCCGGCCGACGCAGAAGGAAGC
CGAGGACTACCACCACCACTACTCGCAGCAGCACGCCGACTGGGCGGCGGTCGACAACATCATCCGGCTGATGTTCGCCC
ACGCCGAGTCCTTCCCCAAGGACCAGCTCAAGCTCATCCGCGACCGCTTCTCCGGCGGCCACGGCGGCTATCCGCTGGTG
GGCGATCCGCAGCAGGTGGCCGACGGCATCTGCGCGCTGCACGAGGCGGGCTTCGCCGGTTCGACGCTGTCCTTCGTCGA
TTACGCCGAGGAATTCCCGTACTTCCGCGACACCGTGCTACCCATCCTGGAAGCCCGCGGACTGCGCAAGGCCTTCAAGG
TGGCGCCATGA

Upstream 100 bases:

>100_bases
GCCAGAGTTTCGGGATAGTTCGCCACGTACCGCGTCACTAGATTGGGCACACCGGCCGCCAAGAGCCGGCCCCCAACAGA
CAGATGACAAGGACACGAAC

Downstream 100 bases:

>100_bases
GCAGCGCGGTGCTGGAAGCGCCGCTGTCGGCGGAAGCCTTCAGGCGCGGCATGCGGCGGCTGGCGCTGCCGACCGCCGTG
GTCACCACCGCGCACGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MSERSSGFVPPVRNDNKFKLGFFAANCSGGMSVTQVPERWQNTWDNNLRLAKLADAAGIEFMLPIARWIGYGGATDFHGN
VLETMTWAAGLLAHTRHINVFATIHTACNHPVVVAKQIATIDQIGKGRAGLNIVCGWNKPEYDAMGQTLPDDHDTRYRMG
QEWYDIIEKLWYESAPFDWDGEYFKLKGAYGQPHPVVDRVPIFNAAGSAQGRDFATRNADFLFTSAIDLARSRAEIAEIK
AMAAAKGRDIDVLTFSYVVCRPTQKEAEDYHHHYSQQHADWAAVDNIIRLMFAHAESFPKDQLKLIRDRFSGGHGGYPLV
GDPQQVADGICALHEAGFAGSTLSFVDYAEEFPYFRDTVLPILEARGLRKAFKVAP

Sequences:

>Translated_376_residues
MSERSSGFVPPVRNDNKFKLGFFAANCSGGMSVTQVPERWQNTWDNNLRLAKLADAAGIEFMLPIARWIGYGGATDFHGN
VLETMTWAAGLLAHTRHINVFATIHTACNHPVVVAKQIATIDQIGKGRAGLNIVCGWNKPEYDAMGQTLPDDHDTRYRMG
QEWYDIIEKLWYESAPFDWDGEYFKLKGAYGQPHPVVDRVPIFNAAGSAQGRDFATRNADFLFTSAIDLARSRAEIAEIK
AMAAAKGRDIDVLTFSYVVCRPTQKEAEDYHHHYSQQHADWAAVDNIIRLMFAHAESFPKDQLKLIRDRFSGGHGGYPLV
GDPQQVADGICALHEAGFAGSTLSFVDYAEEFPYFRDTVLPILEARGLRKAFKVAP
>Mature_375_residues
SERSSGFVPPVRNDNKFKLGFFAANCSGGMSVTQVPERWQNTWDNNLRLAKLADAAGIEFMLPIARWIGYGGATDFHGNV
LETMTWAAGLLAHTRHINVFATIHTACNHPVVVAKQIATIDQIGKGRAGLNIVCGWNKPEYDAMGQTLPDDHDTRYRMGQ
EWYDIIEKLWYESAPFDWDGEYFKLKGAYGQPHPVVDRVPIFNAAGSAQGRDFATRNADFLFTSAIDLARSRAEIAEIKA
MAAAKGRDIDVLTFSYVVCRPTQKEAEDYHHHYSQQHADWAAVDNIIRLMFAHAESFPKDQLKLIRDRFSGGHGGYPLVG
DPQQVADGICALHEAGFAGSTLSFVDYAEEFPYFRDTVLPILEARGLRKAFKVAP

Specific function: Catalyzes the pyrimidine ring opening between N-3 and C- 4 by an unusual flavin hydroperoxide-catalyzed mechanism to yield ureidoacrylate peracid. It cleaves pyrmidine rings directly by adding oxygen atoms, making a toxic ureidoacrylate peracid product wh

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family. RutA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=355, Percent_Identity=28.169014084507, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1787166, Length=318, Percent_Identity=25.4716981132075, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR019914
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 41933; Mature: 41801

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERSSGFVPPVRNDNKFKLGFFAANCSGGMSVTQVPERWQNTWDNNLRLAKLADAAGIE
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEHHCCCCCH
FMLPIARWIGYGGATDFHGNVLETMTWAAGLLAHTRHINVFATIHTACNHPVVVAKQIAT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEEHHCCCCEEHHHHHHH
IDQIGKGRAGLNIVCGWNKPEYDAMGQTLPDDHDTRYRMGQEWYDIIEKLWYESAPFDWD
HHHHCCCCCCCEEEECCCCCCHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCC
GEYFKLKGAYGQPHPVVDRVPIFNAAGSAQGRDFATRNADFLFTSAIDLARSRAEIAEIK
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
AMAAAKGRDIDVLTFSYVVCRPTQKEAEDYHHHYSQQHADWAAVDNIIRLMFAHAESFPK
HHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCH
DQLKLIRDRFSGGHGGYPLVGDPQQVADGICALHEAGFAGSTLSFVDYAEEFPYFRDTVL
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH
PILEARGLRKAFKVAP
HHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SERSSGFVPPVRNDNKFKLGFFAANCSGGMSVTQVPERWQNTWDNNLRLAKLADAAGIE
CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEHHCCCCCH
FMLPIARWIGYGGATDFHGNVLETMTWAAGLLAHTRHINVFATIHTACNHPVVVAKQIAT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEEHHCCCCEEHHHHHHH
IDQIGKGRAGLNIVCGWNKPEYDAMGQTLPDDHDTRYRMGQEWYDIIEKLWYESAPFDWD
HHHHCCCCCCCEEEECCCCCCHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCC
GEYFKLKGAYGQPHPVVDRVPIFNAAGSAQGRDFATRNADFLFTSAIDLARSRAEIAEIK
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
AMAAAKGRDIDVLTFSYVVCRPTQKEAEDYHHHYSQQHADWAAVDNIIRLMFAHAESFPK
HHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCH
DQLKLIRDRFSGGHGGYPLVGDPQQVADGICALHEAGFAGSTLSFVDYAEEFPYFRDTVL
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH
PILEARGLRKAFKVAP
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA