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The map label for this gene is hpaC [H]

Identifier: 119898234

GI number: 119898234

Start: 2133386

End: 2133904

Strand: Reverse

Name: hpaC [H]

Synonym: azo1943

Alternate gene names: 119898234

Gene position: 2133904-2133386 (Counterclockwise)

Preceding gene: 119898235

Following gene: 119898233

Centisome position: 48.76

GC content: 72.45

Gene sequence:

>519_bases
ATGAGCAGCGCGGTGCTGGAAGCGCCGCTGTCGGCGGAAGCCTTCAGGCGCGGCATGCGGCGGCTGGCGCTGCCGACCGC
CGTGGTCACCACCGCGCACGACGGCGAGCGCGGCGGGCTCACCGTGTCGTCGCTGTGTTCGGTCAGCACCGACCCGCCGC
GGCTGCTCGTTTGCATCAACACCGCCGCCAGCGCCTTTCCGCTGCTGCGTGCGAGCGGCGTGCTCGCGGTCAACATGCTG
GCCGAAGGGCAGGGCGCGCTGTGCATGCGCTTCGGCTCCAGCCGTTGCAGCGGCGAGGCGCGCTTTGCCGAAGGGCGCTG
GGAGACCGCCCGCACCGGCGCGCCCCTGCTGGCCGACGCGCTGGCGAGCTTCGATTGCCGTGTGGTGGAGATGCACGAAT
CCGCCACCCACGCGATCGTGATCGCCGATGTGGTCGAGCTGCGCACCGCGCCCGACGCGATGCCGCTGCTGTACCGCGAC
GGCGCCTTCGCCCGCCTGCACATGGAAGCGGCGCCATGA

Upstream 100 bases:

>100_bases
TGTCCTTCGTCGATTACGCCGAGGAATTCCCGTACTTCCGCGACACCGTGCTACCCATCCTGGAAGCCCGCGGACTGCGC
AAGGCCTTCAAGGTGGCGCC

Downstream 100 bases:

>100_bases
GCGCGGCCGCGCGCCGGCCGAAACGCCGAGCAGCGCCACCATCACCGTGACGCAGCCCCCACCCGGCGGGCGCCGGCACC
TGCGTGCCGTTTCCGGACAA

Product: HPA reductase

Products: NA

Alternate protein names: FMN reductase; NAD(P)H:flavin oxidoreductase [H]

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSSAVLEAPLSAEAFRRGMRRLALPTAVVTTAHDGERGGLTVSSLCSVSTDPPRLLVCINTAASAFPLLRASGVLAVNML
AEGQGALCMRFGSSRCSGEARFAEGRWETARTGAPLLADALASFDCRVVEMHESATHAIVIADVVELRTAPDAMPLLYRD
GAFARLHMEAAP

Sequences:

>Translated_172_residues
MSSAVLEAPLSAEAFRRGMRRLALPTAVVTTAHDGERGGLTVSSLCSVSTDPPRLLVCINTAASAFPLLRASGVLAVNML
AEGQGALCMRFGSSRCSGEARFAEGRWETARTGAPLLADALASFDCRVVEMHESATHAIVIADVVELRTAPDAMPLLYRD
GAFARLHMEAAP
>Mature_171_residues
SSAVLEAPLSAEAFRRGMRRLALPTAVVTTAHDGERGGLTVSSLCSVSTDPPRLLVCINTAASAFPLLRASGVLAVNMLA
EGQGALCMRFGSSRCSGEARFAEGRWETARTGAPLLADALASFDCRVVEMHESATHAIVIADVVELRTAPDAMPLLYRDG
AFARLHMEAAP

Specific function: Catalyzes the reduction of FMN to FMNH2 which is used to reduce pyrimidine by RutA via the Rut pathway [H]

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the non-flavoprotein flavin reductase family. RutF subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081819, Length=157, Percent_Identity=35.031847133758, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: =1.5.1.29 [H]

Molecular weight: Translated: 18127; Mature: 17996

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAVLEAPLSAEAFRRGMRRLALPTAVVTTAHDGERGGLTVSSLCSVSTDPPRLLVCIN
CCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEHHHHHCCCCCCCEEEEEEC
TAASAFPLLRASGVLAVNMLAEGQGALCMRFGSSRCSGEARFAEGRWETARTGAPLLADA
CCCHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCCCEECCCCCCCCCCCCHHHHHH
LASFDCRVVEMHESATHAIVIADVVELRTAPDAMPLLYRDGAFARLHMEAAP
HHCCCCEEEEECCCCCEEEEEEEHHHHHCCCCCCCEEEECCCEEEEEEECCC
>Mature Secondary Structure 
SSAVLEAPLSAEAFRRGMRRLALPTAVVTTAHDGERGGLTVSSLCSVSTDPPRLLVCIN
CCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEHHHHHCCCCCCCEEEEEEC
TAASAFPLLRASGVLAVNMLAEGQGALCMRFGSSRCSGEARFAEGRWETARTGAPLLADA
CCCHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCCCEECCCCCCCCCCCCHHHHHH
LASFDCRVVEMHESATHAIVIADVVELRTAPDAMPLLYRDGAFARLHMEAAP
HHCCCCEEEEECCCCCEEEEEEEHHHHHCCCCCCCEEEECCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA