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The map label for this gene is waaF1 [H]

Identifier: 119898097

GI number: 119898097

Start: 1983567

End: 1984781

Strand: Reverse

Name: waaF1 [H]

Synonym: azo1806

Alternate gene names: 119898097

Gene position: 1984781-1983567 (Counterclockwise)

Preceding gene: 119898098

Following gene: 119898096

Centisome position: 45.36

GC content: 75.31

Gene sequence:

>1215_bases
ATGGACCGGGTGAGCTTGCTGCGGCGCCAGCCCGCGCGGGGACAGGCCGCGGCGGACGGCGCGCCGCTCACCGTGGTGCC
GCCGCTGCCGGAAGCCGCGCCCGCCACCGCGGCCTGGGCCGCCGCCCGCCGCATCCTCGCGATCCGGCTCGACAACCTCG
GCGACGTGCTGATGACGACCCCGGCGCTGCGCGCGCTGCGCGACGCCGCGCCGGATCGCCACATCACGCTGCTGGCGTCG
GGTGCAGGCGCGGCGCTCGCGCCCCACCTGCCCGAGGTCGACGCAGTCATCACCGCCAGCGGGCCGTGGATGCCCGGCGG
CGACATCACGCCGGCAGCCTTGCAGGCCACGCTGGAGCGTCTGCGCGCGGGCGCCTTCGATGCCGCGGTGATCTTCACTG
TGTACAGCCAGAACCCGCTGCCGGCAGCGATGCTGTGCTGGCAGGCCGGTATCCCGCTGCGGCTCGCGCACTGCCGCGAG
AACCCTTACCACCTGCTGAGCGACTGGCTGCCCGACCCCGAGCCGCACGCGCTGCTGCGCCACGAGGTGCGCCGCCAGCT
CGACCTCGTCGGCCACGTCGGCGCGCACACCGCGGATACGCGCATGTCCTTCCGCGTGCTCGCCGCCGACCGCGAGCGCG
CGCTGCGCGAACTCGCCGCCGCCGGCATCGACCCCGGCCGCCCCTACATGGTGGTGCATCCCGGCGCCAGCGCGCCGTCG
CGGCGCTATCCGCCGGAACGCTTCGCCGCCGCGCTGCGCCGGCTGGCGGCGCTGTCGGGCGCGGCGATGCCGCAGGTCGT
GCTCACCGGCGACGCGAGCGAGGCGGCGCTGGTGGACAGCGTGCGCGCCTCCGCCCCGGCGGCCACGCTCGCCGGCCAGC
TCAGCCTGGGCGAACTCGCGGCGGTGCTGGAAGGCGCCGCGCTGCTGCTTGCCAACAACACCGGGCCGGTGCATCTCGCG
GCCGCGCTCGGCCGCCCGGTGGTCGATCTCTACGCACTCACCAACCCCCAGCACGCGCCATGGAAGACCCCATCCCGCGT
GCTGTACGAAGACGTGCCCTGCCGCTACTGCTACCGCAGTGTGTGCCCGCAGGGTCATCACGCCTGCCTCCATCTGCTCG
ACCCGGAACGGGTGGCCACCGCCGCCCGCGAACTGCTCGACCTCGGCGCGGAAACCGCCGCGCCGCGCCCCCTGATATCA
CCCGCTGGAGGCTGA

Upstream 100 bases:

>100_bases
ATCCGGACCACGTTGTCGCCAGCCTCACCGAGGCGGCGTTTACCCTCCTTGCCGATGAAGCCTTGCGGGTCGCGCCGGAA
GGCGTCGCGGAGCAGCCGCA

Downstream 100 bases:

>100_bases
GGCCATGTACACGCTCGGAATCAATGCCGCCTTCCACGACAGCGCCGCGTGCCTGGTGCGCGACGGCACCGTGGTTGCCG
CGGCCGAGGAGGAACGCTTC

Product: ADP-heptose--LPS heptosyltransferase II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MDRVSLLRRQPARGQAAADGAPLTVVPPLPEAAPATAAWAAARRILAIRLDNLGDVLMTTPALRALRDAAPDRHITLLAS
GAGAALAPHLPEVDAVITASGPWMPGGDITPAALQATLERLRAGAFDAAVIFTVYSQNPLPAAMLCWQAGIPLRLAHCRE
NPYHLLSDWLPDPEPHALLRHEVRRQLDLVGHVGAHTADTRMSFRVLAADRERALRELAAAGIDPGRPYMVVHPGASAPS
RRYPPERFAAALRRLAALSGAAMPQVVLTGDASEAALVDSVRASAPAATLAGQLSLGELAAVLEGAALLLANNTGPVHLA
AALGRPVVDLYALTNPQHAPWKTPSRVLYEDVPCRYCYRSVCPQGHHACLHLLDPERVATAARELLDLGAETAAPRPLIS
PAGG

Sequences:

>Translated_404_residues
MDRVSLLRRQPARGQAAADGAPLTVVPPLPEAAPATAAWAAARRILAIRLDNLGDVLMTTPALRALRDAAPDRHITLLAS
GAGAALAPHLPEVDAVITASGPWMPGGDITPAALQATLERLRAGAFDAAVIFTVYSQNPLPAAMLCWQAGIPLRLAHCRE
NPYHLLSDWLPDPEPHALLRHEVRRQLDLVGHVGAHTADTRMSFRVLAADRERALRELAAAGIDPGRPYMVVHPGASAPS
RRYPPERFAAALRRLAALSGAAMPQVVLTGDASEAALVDSVRASAPAATLAGQLSLGELAAVLEGAALLLANNTGPVHLA
AALGRPVVDLYALTNPQHAPWKTPSRVLYEDVPCRYCYRSVCPQGHHACLHLLDPERVATAARELLDLGAETAAPRPLIS
PAGG
>Mature_404_residues
MDRVSLLRRQPARGQAAADGAPLTVVPPLPEAAPATAAWAAARRILAIRLDNLGDVLMTTPALRALRDAAPDRHITLLAS
GAGAALAPHLPEVDAVITASGPWMPGGDITPAALQATLERLRAGAFDAAVIFTVYSQNPLPAAMLCWQAGIPLRLAHCRE
NPYHLLSDWLPDPEPHALLRHEVRRQLDLVGHVGAHTADTRMSFRVLAADRERALRELAAAGIDPGRPYMVVHPGASAPS
RRYPPERFAAALRRLAALSGAAMPQVVLTGDASEAALVDSVRASAPAATLAGQLSLGELAAVLEGAALLLANNTGPVHLA
AALGRPVVDLYALTNPQHAPWKTPSRVLYEDVPCRYCYRSVCPQGHHACLHLLDPERVATAARELLDLGAETAAPRPLIS
PAGG

Specific function: Catalyzes heptose transfer to the lipopolysaccharide core. It transfers a heptose, called heptose(III), to the heptose(II) of the inner core [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=320, Percent_Identity=25.625, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011916 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42603; Mature: 42603

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRVSLLRRQPARGQAAADGAPLTVVPPLPEAAPATAAWAAARRILAIRLDNLGDVLMTT
CCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHEEEEEECCCCCHHHHH
PALRALRDAAPDRHITLLASGAGAALAPHLPEVDAVITASGPWMPGGDITPAALQATLER
HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH
LRAGAFDAAVIFTVYSQNPLPAAMLCWQAGIPLRLAHCRENPYHLLSDWLPDPEPHALLR
HHCCCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCHHHHHH
HEVRRQLDLVGHVGAHTADTRMSFRVLAADRERALRELAAAGIDPGRPYMVVHPGASAPS
HHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
RRYPPERFAAALRRLAALSGAAMPQVVLTGDASEAALVDSVRASAPAATLAGQLSLGELA
CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHCCCCHHHHH
AVLEGAALLLANNTGPVHLAAALGRPVVDLYALTNPQHAPWKTPSRVLYEDVPCRYCYRS
HHHCCCEEEEECCCCCEEHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHH
VCPQGHHACLHLLDPERVATAARELLDLGAETAAPRPLISPAGG
HCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDRVSLLRRQPARGQAAADGAPLTVVPPLPEAAPATAAWAAARRILAIRLDNLGDVLMTT
CCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHEEEEEECCCCCHHHHH
PALRALRDAAPDRHITLLASGAGAALAPHLPEVDAVITASGPWMPGGDITPAALQATLER
HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH
LRAGAFDAAVIFTVYSQNPLPAAMLCWQAGIPLRLAHCRENPYHLLSDWLPDPEPHALLR
HHCCCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCHHHHHH
HEVRRQLDLVGHVGAHTADTRMSFRVLAADRERALRELAAAGIDPGRPYMVVHPGASAPS
HHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
RRYPPERFAAALRRLAALSGAAMPQVVLTGDASEAALVDSVRASAPAATLAGQLSLGELA
CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHCCCCHHHHH
AVLEGAALLLANNTGPVHLAAALGRPVVDLYALTNPQHAPWKTPSRVLYEDVPCRYCYRS
HHHCCCEEEEECCCCCEEHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHH
VCPQGHHACLHLLDPERVATAARELLDLGAETAAPRPLISPAGG
HCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA