| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yrrI [H]
Identifier: 119898053
GI number: 119898053
Start: 1931040
End: 1932170
Strand: Reverse
Name: yrrI [H]
Synonym: azo1762
Alternate gene names: 119898053
Gene position: 1932170-1931040 (Counterclockwise)
Preceding gene: 119898054
Following gene: 119898052
Centisome position: 44.15
GC content: 72.68
Gene sequence:
>1131_bases TTGATCCCGCGCCGCGCCCCCTCGCCGCAGCCACGCCGGCGGCGTGCGCGCGCCGTCGCGCCGCCCACCCCGGGCAGCGC CGCGGACGCGCGCCGCGCCGACCGCTCGATGGTGCTGGTCGCCGTCGTCGTGCTGCTCGGCAGCATCGGGCTGTTGCTGT GGGCGATCGCCGACGTGGTGCTGCTGGTGTTTGCCGGGGCGCTGTTCGCCCTCTTCCTGCGCGGGCTGGTGGAGCCGGTG GCGCGCGGCGCGCGCGTCACCGACACCACCGCGCTGATCCTGGTGCTCGGCGCGCTCGGCGGCCTCGTCGTGCTCGGCGG CGTCTTCCTCGGCGGCGAGACCGCCACCCAGCTCGACGAACTCGGCCCCCGCCTGCATGAGGCCTGGACCCAGATGCAGC GCGGCATGCGCGAATACCAGATAGGGCGCGCCCTGCTCGCGGAGCGCGACCTGACCGCGCTGGTGCCGCAGAACGCGGAA TGGGTGGAGCGCATCGGCGGCCTGTTCTCGACCACGCTGGGCGCCATCGCCGGCTTCTTCATCGTGATGTTCATCGGCCT CTACGGCGCAGTCAGCCCGCAGACCTACCGCGACGGCCTGCTCTACCTCGTGCCGCGCGACAGCCGCGAGCGCGCCGCCG AAGTCATGGACGAAGTGGTCGATACCCTGCGCAACTGGCTGCTCGGCACCTTCATCAAGATGGTGGTGGTGGGCACCGCG GTCACGATCGGGCTGTGGCTGCTCGACATACCGCTGGCGCTGGCGCTCGGGCTGATCGCGTTCGCGCTCGAATTCGCGCC CTATGTGGGTCCGGTGCTGGCCGCGCTGCCGGCGGTGCTGGTGGCGCTGGCGCTGGGGCCGCAGCAGGCGCTGTCTGTGG TGCTGCTCTACCTGGGCGTGCAGGCGGCGGAGAACTACGTGCTGTCGCCGCTGGTGGATCTGCGCAGCGTCAAGCTGCCG CCGGCGCTGACGATCGCGGCGCAGGTGTTGCTGGGCGCCCTGCTCGGCGCGCTCGGGGTGATGTTCGCCACCCCGCTGAC CGCCACCGGGGTGGTGCTGGTGCGCATGCTCTACGTCGAACCGGACGAGCCCGCGCCGGAAGCCGCGGCGGCGGCCGAGG ACGCCAAATGA
Upstream 100 bases:
>100_bases TGCAGGAGGCGCCCGGCGACCGCGCCGCGCTGCTGGTACGGCGCGGTTCGGCCGCCCTCTTCGTCGCGGTGGAGGTGCCC GGGCGGCTGCAGGAGGCGGG
Downstream 100 bases:
>100_bases GCGCCGCGCGCCGGCGCCGGATCGCGGTATGGACCGCCGCGGTGGCGGTGTCCCTGCTCGCCCTCTACGCCGCGGCGGGT TTTCTGCTCCTGCCCTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MIPRRAPSPQPRRRRARAVAPPTPGSAADARRADRSMVLVAVVVLLGSIGLLLWAIADVVLLVFAGALFALFLRGLVEPV ARGARVTDTTALILVLGALGGLVVLGGVFLGGETATQLDELGPRLHEAWTQMQRGMREYQIGRALLAERDLTALVPQNAE WVERIGGLFSTTLGAIAGFFIVMFIGLYGAVSPQTYRDGLLYLVPRDSRERAAEVMDEVVDTLRNWLLGTFIKMVVVGTA VTIGLWLLDIPLALALGLIAFALEFAPYVGPVLAALPAVLVALALGPQQALSVVLLYLGVQAAENYVLSPLVDLRSVKLP PALTIAAQVLLGALLGALGVMFATPLTATGVVLVRMLYVEPDEPAPEAAAAAEDAK
Sequences:
>Translated_376_residues MIPRRAPSPQPRRRRARAVAPPTPGSAADARRADRSMVLVAVVVLLGSIGLLLWAIADVVLLVFAGALFALFLRGLVEPV ARGARVTDTTALILVLGALGGLVVLGGVFLGGETATQLDELGPRLHEAWTQMQRGMREYQIGRALLAERDLTALVPQNAE WVERIGGLFSTTLGAIAGFFIVMFIGLYGAVSPQTYRDGLLYLVPRDSRERAAEVMDEVVDTLRNWLLGTFIKMVVVGTA VTIGLWLLDIPLALALGLIAFALEFAPYVGPVLAALPAVLVALALGPQQALSVVLLYLGVQAAENYVLSPLVDLRSVKLP PALTIAAQVLLGALLGALGVMFATPLTATGVVLVRMLYVEPDEPAPEAAAAAEDAK >Mature_376_residues MIPRRAPSPQPRRRRARAVAPPTPGSAADARRADRSMVLVAVVVLLGSIGLLLWAIADVVLLVFAGALFALFLRGLVEPV ARGARVTDTTALILVLGALGGLVVLGGVFLGGETATQLDELGPRLHEAWTQMQRGMREYQIGRALLAERDLTALVPQNAE WVERIGGLFSTTLGAIAGFFIVMFIGLYGAVSPQTYRDGLLYLVPRDSRERAAEVMDEVVDTLRNWLLGTFIKMVVVGTA VTIGLWLLDIPLALALGLIAFALEFAPYVGPVLAALPAVLVALALGPQQALSVVLLYLGVQAAENYVLSPLVDLRSVKLP PALTIAAQVLLGALLGALGVMFATPLTATGVVLVRMLYVEPDEPAPEAAAAAEDAK
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
Organism=Escherichia coli, GI1788838, Length=146, Percent_Identity=33.5616438356164, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 39758; Mature: 39758
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPRRAPSPQPRRRRARAVAPPTPGSAADARRADRSMVLVAVVVLLGSIGLLLWAIADVV CCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVFAGALFALFLRGLVEPVARGARVTDTTALILVLGALGGLVVLGGVFLGGETATQLDE HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LGPRLHEAWTQMQRGMREYQIGRALLAERDLTALVPQNAEWVERIGGLFSTTLGAIAGFF HCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH IVMFIGLYGAVSPQTYRDGLLYLVPRDSRERAAEVMDEVVDTLRNWLLGTFIKMVVVGTA HHHHHHHHHCCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTIGLWLLDIPLALALGLIAFALEFAPYVGPVLAALPAVLVALALGPQQALSVVLLYLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH QAAENYVLSPLVDLRSVKLPPALTIAAQVLLGALLGALGVMFATPLTATGVVLVRMLYVE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC PDEPAPEAAAAAEDAK CCCCCCHHHHHCCCCC >Mature Secondary Structure MIPRRAPSPQPRRRRARAVAPPTPGSAADARRADRSMVLVAVVVLLGSIGLLLWAIADVV CCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVFAGALFALFLRGLVEPVARGARVTDTTALILVLGALGGLVVLGGVFLGGETATQLDE HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LGPRLHEAWTQMQRGMREYQIGRALLAERDLTALVPQNAEWVERIGGLFSTTLGAIAGFF HCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH IVMFIGLYGAVSPQTYRDGLLYLVPRDSRERAAEVMDEVVDTLRNWLLGTFIKMVVVGTA HHHHHHHHHCCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTIGLWLLDIPLALALGLIAFALEFAPYVGPVLAALPAVLVALALGPQQALSVVLLYLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH QAAENYVLSPLVDLRSVKLPPALTIAAQVLLGALLGALGVMFATPLTATGVVLVRMLYVE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC PDEPAPEAAAAAEDAK CCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]