| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is nagZ2 [H]
Identifier: 119897938
GI number: 119897938
Start: 1806008
End: 1807141
Strand: Direct
Name: nagZ2 [H]
Synonym: azo1647
Alternate gene names: 119897938
Gene position: 1806008-1807141 (Clockwise)
Preceding gene: 119897937
Following gene: 119897939
Centisome position: 41.27
GC content: 68.61
Gene sequence:
>1134_bases ATGACTTCCTATCCGCTCAGCCTCCCCCGCGGCCCGGTGATGATCGACGTCGCCGGCACCGCGCTGACCGACGAGGAACG CGAACGCCTGTGTGACCCGCTGGTCGGCGGCGTGATCCTCTTCGCCCGCAACTTCACCGGCTCCGAACAGCTCGCCGCGC TCACCGCAGACATCCGCGCGCTGCGCAGCCCGCAGTTGCTGATCGCGGTCGACCACGAGGGCGGGCGGGTGCAGCGTTTC CGCACCGATGGCTTCACCCGTCTGCCGGCGATGCGCAGTCTCGGCACGCTGTGGGAGCGCGACCATCTCGCCGCCCTCGA CGCCGCCCGCCACACGGGCTACGTGCTTGCCGCCGAGTTGCTGGCGCACGGCGTCGATCTCAGCTTCACGCCGGTGCTGG ACCTCGACTACGGCGTCAGCCGCGCCATCGGTAACCGCGCCTTCCATCGCGATCCGCAGGTCGTCGCCCAACTCGCCCAG GCCCTGCTTGCCGGCATGGCCGAAGCGGGCATGGGCTGCGTGGGCAAGCATTTTCCCGGCCACGGCTACGTCGAGGCCGA TTCGCATCACGAGGTGCCGGTTGATGACCGGGATTTCGACACCATCTGGAACGAGGACATCGCCCCGTACCGCCACCGCC TCGGCCGCCAGCTGGCGGGCGTGATGCCGGCGCACGTGATCTATCCCGCTGCCGATCCCAACCCGGCCGGTTTTTCCGCC TTCTGGCTGAAGGACGTGCTGCGCCAGCGCGTCGGCTTCAAGGGCGTGATCTTCAGCGACGACCTCAACATGGAAGGCGC GGCGCTGGCCGGCGACATCCTTGGCCGCTGCAAGGCGGCTTATGAAGCGGGCTGCGACATGTTGCTGGTGTGCAACCGGC CCGATCGGGTCGCCGAGTTGCTCGACCGCTGGGCACCGGTGCCGGATGCGGAGAAGCTTGCCCGCGTGGCGGCGATCGCT CCGGTGCGGCCGAAGGCGCCGTGGCTGGCCGATCCGTTTGCGCTCGAACTGCACGAACCCTATCTGACAGCGCGCGGGCA GGTTGCAGCCATTGCCGAGGACGCGAGCGGGCCGACGATGACGGCAGGCACGATAGGGAACCAGGCGGTCGAGATCCTGA AGAAGGACGTTTAG
Upstream 100 bases:
>100_bases ACGGCCTGCAGACCTATCTGGACGACCGGCGCCTGAACGCCCACCTGAGCCTGACCGACGAAAACGACTATGTGGTCGCC TTCGCGGTAATCGAGACCCG
Downstream 100 bases:
>100_bases CAGCGACTGGTGCATGCGATGCCCATCGACGATCCACTGATTCAAGACTTTCTGTTCCACTCACGCCAGTGGCGGGGCGG GGCGTTTGTGGAGCAGGCGA
Product: beta-hexosaminidase
Products: NA
Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MTSYPLSLPRGPVMIDVAGTALTDEERERLCDPLVGGVILFARNFTGSEQLAALTADIRALRSPQLLIAVDHEGGRVQRF RTDGFTRLPAMRSLGTLWERDHLAALDAARHTGYVLAAELLAHGVDLSFTPVLDLDYGVSRAIGNRAFHRDPQVVAQLAQ ALLAGMAEAGMGCVGKHFPGHGYVEADSHHEVPVDDRDFDTIWNEDIAPYRHRLGRQLAGVMPAHVIYPAADPNPAGFSA FWLKDVLRQRVGFKGVIFSDDLNMEGAALAGDILGRCKAAYEAGCDMLLVCNRPDRVAELLDRWAPVPDAEKLARVAAIA PVRPKAPWLADPFALELHEPYLTARGQVAAIAEDASGPTMTAGTIGNQAVEILKKDV
Sequences:
>Translated_377_residues MTSYPLSLPRGPVMIDVAGTALTDEERERLCDPLVGGVILFARNFTGSEQLAALTADIRALRSPQLLIAVDHEGGRVQRF RTDGFTRLPAMRSLGTLWERDHLAALDAARHTGYVLAAELLAHGVDLSFTPVLDLDYGVSRAIGNRAFHRDPQVVAQLAQ ALLAGMAEAGMGCVGKHFPGHGYVEADSHHEVPVDDRDFDTIWNEDIAPYRHRLGRQLAGVMPAHVIYPAADPNPAGFSA FWLKDVLRQRVGFKGVIFSDDLNMEGAALAGDILGRCKAAYEAGCDMLLVCNRPDRVAELLDRWAPVPDAEKLARVAAIA PVRPKAPWLADPFALELHEPYLTARGQVAAIAEDASGPTMTAGTIGNQAVEILKKDV >Mature_376_residues TSYPLSLPRGPVMIDVAGTALTDEERERLCDPLVGGVILFARNFTGSEQLAALTADIRALRSPQLLIAVDHEGGRVQRFR TDGFTRLPAMRSLGTLWERDHLAALDAARHTGYVLAAELLAHGVDLSFTPVLDLDYGVSRAIGNRAFHRDPQVVAQLAQA LLAGMAEAGMGCVGKHFPGHGYVEADSHHEVPVDDRDFDTIWNEDIAPYRHRLGRQLAGVMPAHVIYPAADPNPAGFSAF WLKDVLRQRVGFKGVIFSDDLNMEGAALAGDILGRCKAAYEAGCDMLLVCNRPDRVAELLDRWAPVPDAEKLARVAAIAP VRPKAPWLADPFALELHEPYLTARGQVAAIAEDASGPTMTAGTIGNQAVEILKKDV
Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787350, Length=307, Percent_Identity=49.5114006514658, Blast_Score=281, Evalue=5e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022956 - InterPro: IPR019800 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3 [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 40803; Mature: 40672
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSYPLSLPRGPVMIDVAGTALTDEERERLCDPLVGGVILFARNFTGSEQLAALTADIRA CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHH LRSPQLLIAVDHEGGRVQRFRTDGFTRLPAMRSLGTLWERDHLAALDAARHTGYVLAAEL HCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LAHGVDLSFTPVLDLDYGVSRAIGNRAFHRDPQVVAQLAQALLAGMAEAGMGCVGKHFPG HHCCCCCCCCEEEECCCCHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC HGYVEADSHHEVPVDDRDFDTIWNEDIAPYRHRLGRQLAGVMPAHVIYPAADPNPAGFSA CCEEECCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHH FWLKDVLRQRVGFKGVIFSDDLNMEGAALAGDILGRCKAAYEAGCDMLLVCNRPDRVAEL HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH LDRWAPVPDAEKLARVAAIAPVRPKAPWLADPFALELHEPYLTARGQVAAIAEDASGPTM HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEE TAGTIGNQAVEILKKDV EECCCCHHHHHHHHHCC >Mature Secondary Structure TSYPLSLPRGPVMIDVAGTALTDEERERLCDPLVGGVILFARNFTGSEQLAALTADIRA CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHH LRSPQLLIAVDHEGGRVQRFRTDGFTRLPAMRSLGTLWERDHLAALDAARHTGYVLAAEL HCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LAHGVDLSFTPVLDLDYGVSRAIGNRAFHRDPQVVAQLAQALLAGMAEAGMGCVGKHFPG HHCCCCCCCCEEEECCCCHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC HGYVEADSHHEVPVDDRDFDTIWNEDIAPYRHRLGRQLAGVMPAHVIYPAADPNPAGFSA CCEEECCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHH FWLKDVLRQRVGFKGVIFSDDLNMEGAALAGDILGRCKAAYEAGCDMLLVCNRPDRVAEL HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH LDRWAPVPDAEKLARVAAIAPVRPKAPWLADPFALELHEPYLTARGQVAAIAEDASGPTM HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEE TAGTIGNQAVEILKKDV EECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA