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The map label for this gene is yceD [H]

Identifier: 119897911

GI number: 119897911

Start: 1784046

End: 1784531

Strand: Direct

Name: yceD [H]

Synonym: azo1620

Alternate gene names: 119897911

Gene position: 1784046-1784531 (Clockwise)

Preceding gene: 119897908

Following gene: 119897912

Centisome position: 40.77

GC content: 62.96

Gene sequence:

>486_bases
GTGATCGCCGACCCCTTTCGCTTCGCCGTCGAGGCCCGCAGCCTGGCGGGGAAGGTCGGGGTCGCTGCGCTTGAGCGGTT
GGCGGATGCTCTCGCAGGTACGGAAGGTGATGTGGAATACCGCATCGCCGGATCGCTCGACAAGCAGGGAAAGCCGCGTT
TGCAGTTGATTGTCAAAGGCTGCCTGGAACTGCGTTGTCAGCGGTGTCTTGAAGGGATGTCCTGGGCGCTTGCAGTGGAT
AGAGTCTTGCAGCCTTTCCGCAGTGGGGAAGAAATTCCCGACGAGGAGCTGGAGGACGACGAGGTCGACGCCATCGAGGT
CGAATCCGGGCTGGATGTCATCGGCTTGGTCGAAGACGAGATTCTGTTGGCATTGCCCATCGCGCCGCGGCATGAAAGCT
GTGGGCCCGCCGGTCAAGAGGGTGCAGACGGCAAGGCTTCTCCGTTTGCGGTCCTGGCCGGGCTGCGCGGTGGCGGCAAG
GCTTGA

Upstream 100 bases:

>100_bases
GCCGCCGGGTCTTCCGGCTAACCGTCTCAAGTCTTTGACAATCAGGCGGAAAGAATACTATGATGCGCAGCTTATGTCGC
ACCCAGACGTTCCGTCAGTC

Downstream 100 bases:

>100_bases
ACGAAACATCGTAGTACGTGTGAATTAGGAGTTTTTCATGGCAGTCCAGCAGAACAAGAAGTCTCCCTCGAAGCGTGGCA
TGCACCGTGCGCACGATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: G30K [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MIADPFRFAVEARSLAGKVGVAALERLADALAGTEGDVEYRIAGSLDKQGKPRLQLIVKGCLELRCQRCLEGMSWALAVD
RVLQPFRSGEEIPDEELEDDEVDAIEVESGLDVIGLVEDEILLALPIAPRHESCGPAGQEGADGKASPFAVLAGLRGGGK
A

Sequences:

>Translated_161_residues
MIADPFRFAVEARSLAGKVGVAALERLADALAGTEGDVEYRIAGSLDKQGKPRLQLIVKGCLELRCQRCLEGMSWALAVD
RVLQPFRSGEEIPDEELEDDEVDAIEVESGLDVIGLVEDEILLALPIAPRHESCGPAGQEGADGKASPFAVLAGLRGGGK
A
>Mature_161_residues
MIADPFRFAVEARSLAGKVGVAALERLADALAGTEGDVEYRIAGSLDKQGKPRLQLIVKGCLELRCQRCLEGMSWALAVD
RVLQPFRSGEEIPDEELEDDEVDAIEVESGLDVIGLVEDEILLALPIAPRHESCGPAGQEGADGKASPFAVLAGLRGGGK
A

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0159 [H]

Homologues:

Organism=Escherichia coli, GI1787329, Length=167, Percent_Identity=30.5389221556886, Blast_Score=70, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003772 [H]

Pfam domain/function: PF02620 DUF177 [H]

EC number: NA

Molecular weight: Translated: 17024; Mature: 17024

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIADPFRFAVEARSLAGKVGVAALERLADALAGTEGDVEYRIAGSLDKQGKPRLQLIVKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHH
CLELRCQRCLEGMSWALAVDRVLQPFRSGEEIPDEELEDDEVDAIEVESGLDVIGLVEDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCC
ILLALPIAPRHESCGPAGQEGADGKASPFAVLAGLRGGGKA
EEEEECCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCC
>Mature Secondary Structure
MIADPFRFAVEARSLAGKVGVAALERLADALAGTEGDVEYRIAGSLDKQGKPRLQLIVKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHH
CLELRCQRCLEGMSWALAVDRVLQPFRSGEEIPDEELEDDEVDAIEVESGLDVIGLVEDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCC
ILLALPIAPRHESCGPAGQEGADGKASPFAVLAGLRGGGKA
EEEEECCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]