| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is guaB [H]
Identifier: 119897871
GI number: 119897871
Start: 1736897
End: 1738357
Strand: Direct
Name: guaB [H]
Synonym: azo1580
Alternate gene names: 119897871
Gene position: 1736897-1738357 (Clockwise)
Preceding gene: 119897869
Following gene: 119897872
Centisome position: 39.69
GC content: 65.5
Gene sequence:
>1461_bases ATGCGAGTGATCCAGAAGGCGCTGACGTTCGATGACGTCCTTCTCGTTCCCGCCCACTCGACGGTCCTACCGCGCGATGT GAGCCTGCAGACCCAGCTCACGCGCCGCATCCGCATCAACATCCCGCTGGTTTCCGCCGCGATGGATACCGTCACCGAGG CCCGCCTCGCGATCGCACTCGCTCAGGAAGGCGGACTGGGCATCGTCCACAAGAACCTCACTCCGAAGCAGCAGGCGGCC GAAGTCAGCAAGGTCAAGCGCTTCGAATCCGGCGTGCTGAAGGACCCGATCACGATTCCGCCGACGATGAGCGTGCGTGA AGTCGTGGCGCTCACGCGCCAGCACCGCTTCTCCGGCCTGCCCGTGCTCGAAGGCAAGAAGGTCGTCGGCATCGTCACCA ATCGCGACCTTCGTTTCGAAACCAATCTCGATCAGCCCGTGTCGGCCATCATGACGCCGCAGTCGCGCCTGGTGACCGTT AAAGAAGGTGGCAGCCTCGAAGATGCGCGGGCGCTGATGCACAAGCATCGCCTCGAGCGCGTGCTGGTGCTCAACGACGA GGGTGAACTGCGCGGCCTCATCACCGTGAAGGACATGATGAAGTCCACCGAGCACCCGCTTGCCGCGAAGGACGAGCTCG GCCGTCTGCGCGTCGGCGCGGCGATCGGTGTCGGGGCCGGCACCGAAGAGCGCGCGGAACTGCTCGCCGACGCCGGCGTG GATGTGCTGGTGGTGGATACCGCGCACGGCCATTCGCAGGGCGTGCTCGACCGCGTTAACTGGGTCAAGAAGAACTTCCC CAACGTCGAGGTGATCGGCGGCAACATCGCCACCGGCGACGCGGCGCGTGCGCTGGCCGATTCGGGCGCTGATGCGGTGA AGGTGGGTATCGGCCCCGGCTCGATCTGCACCACGCGCATCATCGCCGGCGTGGGCGTTCCGCAGATCACCGCGGTCGAC AACGTTGCAACGGCGCTGGCCGGCACCGGCGTTCCGCTGATCGCGGACGGGGGCATCCGCTTCTCCGGCGATATCGCCAA GGCGCTTGCCGCGGGTGCCAACGCGGTGATGCTGGGCGGCCTGTTCGCGGGTACCGAGGAATCGCCGGGCGAAACCGTGT TGTATCAGGGCCGTTCCTACAAGTCCTACCGCGGCATGGGCTCGCTCGGTGCCATGCAGCAGGGCGCAGCCGACCGCTAT TTCCAGGACAGTTCGGCCAATGTGGACAAACTGGTACCCGAAGGCATCGAAGGGCGCGTGCCCTACAAGGGCGCCGTCAC CGCCGTGATCCACCAACTGATCGGTGGCGTCCGCGCCTCCATGGGCTATCTTGGCTGCGAGAGCATCGGCGCCATGCACG AACGCGCCCAGTTCGTCGAGATCACCTCGGCGGGTGTGCGCGAATCCCACGTGCATGACGTTCAGATCACCAAGGAAGCG CCCAACTACCACGTCGATTAA
Upstream 100 bases:
>100_bases GACGGTTCGCGCCACGGCTTGGCGCAGGATATATCAGGGGTGACTTACCACCGAGGGAGGCGGTCTGTATAATACGGATT TGGTTGAAAGGATAGAAGCC
Downstream 100 bases:
>100_bases CGCTGCATCGTCGTAGCGTCACCTACAGGCGGTCGTCGGGTTGTACCGACGCCGCCTTTCCTGTTTGTTGAGACGGACAT GTCCCACCAGAAAATCCTCA
Product: IMP dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MRVIQKALTFDDVLLVPAHSTVLPRDVSLQTQLTRRIRINIPLVSAAMDTVTEARLAIALAQEGGLGIVHKNLTPKQQAA EVSKVKRFESGVLKDPITIPPTMSVREVVALTRQHRFSGLPVLEGKKVVGIVTNRDLRFETNLDQPVSAIMTPQSRLVTV KEGGSLEDARALMHKHRLERVLVLNDEGELRGLITVKDMMKSTEHPLAAKDELGRLRVGAAIGVGAGTEERAELLADAGV DVLVVDTAHGHSQGVLDRVNWVKKNFPNVEVIGGNIATGDAARALADSGADAVKVGIGPGSICTTRIIAGVGVPQITAVD NVATALAGTGVPLIADGGIRFSGDIAKALAAGANAVMLGGLFAGTEESPGETVLYQGRSYKSYRGMGSLGAMQQGAADRY FQDSSANVDKLVPEGIEGRVPYKGAVTAVIHQLIGGVRASMGYLGCESIGAMHERAQFVEITSAGVRESHVHDVQITKEA PNYHVD
Sequences:
>Translated_486_residues MRVIQKALTFDDVLLVPAHSTVLPRDVSLQTQLTRRIRINIPLVSAAMDTVTEARLAIALAQEGGLGIVHKNLTPKQQAA EVSKVKRFESGVLKDPITIPPTMSVREVVALTRQHRFSGLPVLEGKKVVGIVTNRDLRFETNLDQPVSAIMTPQSRLVTV KEGGSLEDARALMHKHRLERVLVLNDEGELRGLITVKDMMKSTEHPLAAKDELGRLRVGAAIGVGAGTEERAELLADAGV DVLVVDTAHGHSQGVLDRVNWVKKNFPNVEVIGGNIATGDAARALADSGADAVKVGIGPGSICTTRIIAGVGVPQITAVD NVATALAGTGVPLIADGGIRFSGDIAKALAAGANAVMLGGLFAGTEESPGETVLYQGRSYKSYRGMGSLGAMQQGAADRY FQDSSANVDKLVPEGIEGRVPYKGAVTAVIHQLIGGVRASMGYLGCESIGAMHERAQFVEITSAGVRESHVHDVQITKEA PNYHVD >Mature_486_residues MRVIQKALTFDDVLLVPAHSTVLPRDVSLQTQLTRRIRINIPLVSAAMDTVTEARLAIALAQEGGLGIVHKNLTPKQQAA EVSKVKRFESGVLKDPITIPPTMSVREVVALTRQHRFSGLPVLEGKKVVGIVTNRDLRFETNLDQPVSAIMTPQSRLVTV KEGGSLEDARALMHKHRLERVLVLNDEGELRGLITVKDMMKSTEHPLAAKDELGRLRVGAAIGVGAGTEERAELLADAGV DVLVVDTAHGHSQGVLDRVNWVKKNFPNVEVIGGNIATGDAARALADSGADAVKVGIGPGSICTTRIIAGVGVPQITAVD NVATALAGTGVPLIADGGIRFSGDIAKALAAGANAVMLGGLFAGTEESPGETVLYQGRSYKSYRGMGSLGAMQQGAADRY FQDSSANVDKLVPEGIEGRVPYKGAVTAVIHQLIGGVRASMGYLGCESIGAMHERAQFVEITSAGVRESHVHDVQITKEA PNYHVD
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=453, Percent_Identity=41.0596026490066, Blast_Score=345, Evalue=6e-95, Organism=Homo sapiens, GI34328928, Length=453, Percent_Identity=41.0596026490066, Blast_Score=345, Evalue=8e-95, Organism=Homo sapiens, GI156616279, Length=453, Percent_Identity=41.0596026490066, Blast_Score=344, Evalue=1e-94, Organism=Homo sapiens, GI34328930, Length=453, Percent_Identity=41.0596026490066, Blast_Score=344, Evalue=1e-94, Organism=Homo sapiens, GI66933016, Length=453, Percent_Identity=41.0596026490066, Blast_Score=341, Evalue=7e-94, Organism=Homo sapiens, GI217035152, Length=449, Percent_Identity=40.9799554565702, Blast_Score=338, Evalue=6e-93, Organism=Homo sapiens, GI217035148, Length=453, Percent_Identity=40.1766004415011, Blast_Score=333, Evalue=2e-91, Organism=Homo sapiens, GI217035150, Length=453, Percent_Identity=37.9690949227373, Blast_Score=304, Evalue=1e-82, Organism=Homo sapiens, GI50541956, Length=247, Percent_Identity=38.4615384615385, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI50541954, Length=247, Percent_Identity=38.4615384615385, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI50541952, Length=247, Percent_Identity=38.4615384615385, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI50541948, Length=247, Percent_Identity=38.4615384615385, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI156104880, Length=361, Percent_Identity=30.7479224376731, Blast_Score=161, Evalue=1e-39, Organism=Escherichia coli, GI1788855, Length=486, Percent_Identity=62.962962962963, Blast_Score=577, Evalue=1e-166, Organism=Escherichia coli, GI1786293, Length=224, Percent_Identity=36.1607142857143, Blast_Score=146, Evalue=4e-36, Organism=Caenorhabditis elegans, GI71994385, Length=481, Percent_Identity=37.8378378378378, Blast_Score=296, Evalue=1e-80, Organism=Caenorhabditis elegans, GI71994389, Length=427, Percent_Identity=39.5784543325527, Blast_Score=285, Evalue=3e-77, Organism=Caenorhabditis elegans, GI17560440, Length=276, Percent_Identity=33.3333333333333, Blast_Score=163, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6323585, Length=484, Percent_Identity=41.1157024793388, Blast_Score=360, Evalue=1e-100, Organism=Saccharomyces cerevisiae, GI6322012, Length=488, Percent_Identity=39.344262295082, Blast_Score=342, Evalue=6e-95, Organism=Saccharomyces cerevisiae, GI6323464, Length=484, Percent_Identity=39.4628099173554, Blast_Score=331, Evalue=2e-91, Organism=Saccharomyces cerevisiae, GI6319352, Length=342, Percent_Identity=39.1812865497076, Blast_Score=254, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6319353, Length=119, Percent_Identity=41.1764705882353, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI24641071, Length=485, Percent_Identity=39.5876288659794, Blast_Score=335, Evalue=5e-92, Organism=Drosophila melanogaster, GI24641073, Length=485, Percent_Identity=39.5876288659794, Blast_Score=335, Evalue=5e-92, Organism=Drosophila melanogaster, GI28571163, Length=443, Percent_Identity=40.4063205417607, Blast_Score=306, Evalue=2e-83,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51412; Mature: 51412
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVIQKALTFDDVLLVPAHSTVLPRDVSLQTQLTRRIRINIPLVSAAMDTVTEARLAIAL CCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHEEEEEEEECEEHHHHHHHHHHHHEEEEE AQEGGLGIVHKNLTPKQQAAEVSKVKRFESGVLKDPITIPPTMSVREVVALTRQHRFSGL ECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC PVLEGKKVVGIVTNRDLRFETNLDQPVSAIMTPQSRLVTVKEGGSLEDARALMHKHRLER CEECCCEEEEEEECCCEEEECCCCCCHHHHCCCCHHEEEEECCCCHHHHHHHHHHHHCCE VLVLNDEGELRGLITVKDMMKSTEHPLAAKDELGRLRVGAAIGVGAGTEERAELLADAGV EEEECCCCCEEEEEEHHHHHHHCCCCCCCHHCCCCEEECEEEECCCCCHHHHHHHHHCCC DVLVVDTAHGHSQGVLDRVNWVKKNFPNVEVIGGNIATGDAARALADSGADAVKVGIGPG CEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCEEEEECCCC SICTTRIIAGVGVPQITAVDNVATALAGTGVPLIADGGIRFSGDIAKALAAGANAVMLGG HHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCEEECCCEEECCHHHHHHHCCCCEEEEEE LFAGTEESPGETVLYQGRSYKSYRGMGSLGAMQQGAADRYFQDSSANVDKLVPEGIEGRV EEECCCCCCCCEEEECCCCCCHHCCCCCCCHHHCCCCHHCCCCCCCCHHHHCCCCCCCCC PYKGAVTAVIHQLIGGVRASMGYLGCESIGAMHERAQFVEITSAGVRESHVHDVQITKEA CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEECC PNYHVD CCCCCC >Mature Secondary Structure MRVIQKALTFDDVLLVPAHSTVLPRDVSLQTQLTRRIRINIPLVSAAMDTVTEARLAIAL CCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHEEEEEEEECEEHHHHHHHHHHHHEEEEE AQEGGLGIVHKNLTPKQQAAEVSKVKRFESGVLKDPITIPPTMSVREVVALTRQHRFSGL ECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC PVLEGKKVVGIVTNRDLRFETNLDQPVSAIMTPQSRLVTVKEGGSLEDARALMHKHRLER CEECCCEEEEEEECCCEEEECCCCCCHHHHCCCCHHEEEEECCCCHHHHHHHHHHHHCCE VLVLNDEGELRGLITVKDMMKSTEHPLAAKDELGRLRVGAAIGVGAGTEERAELLADAGV EEEECCCCCEEEEEEHHHHHHHCCCCCCCHHCCCCEEECEEEECCCCCHHHHHHHHHCCC DVLVVDTAHGHSQGVLDRVNWVKKNFPNVEVIGGNIATGDAARALADSGADAVKVGIGPG CEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCEEEEECCCC SICTTRIIAGVGVPQITAVDNVATALAGTGVPLIADGGIRFSGDIAKALAAGANAVMLGG HHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCEEECCCEEECCHHHHHHHCCCCEEEEEE LFAGTEESPGETVLYQGRSYKSYRGMGSLGAMQQGAADRYFQDSSANVDKLVPEGIEGRV EEECCCCCCCCEEEECCCCCCHHCCCCCCCHHHCCCCHHCCCCCCCCHHHHCCCCCCCCC PYKGAVTAVIHQLIGGVRASMGYLGCESIGAMHERAQFVEITSAGVRESHVHDVQITKEA CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEECC PNYHVD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA