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The map label for this gene is ydiU [C]

Identifier: 119897865

GI number: 119897865

Start: 1732640

End: 1734199

Strand: Direct

Name: ydiU [C]

Synonym: azo1574

Alternate gene names: 119897865

Gene position: 1732640-1734199 (Clockwise)

Preceding gene: 119897864

Following gene: 119897868

Centisome position: 39.59

GC content: 66.54

Gene sequence:

>1560_bases
ATGAGACCACTCGTTTTCGACAATCGCTTCGTGCGCGAACTGCCCGCCGATCCGGAGACCGGGCCGCATACCCGGCAGGT
TGCGGGCGCCAGCTATTCGCGCGTGAATCCCACCCCGGTGGCCGCGCCGCATCTCGTGGCCCATTCCGCAGAGGTTGCGG
CGCTGCTCGGCTGGGACGAATCCGACATTGCCAGCCCGGAATTCGCCGAGGTGTTCGGCGGCAATCGTCTGCTCGACGGC
ATGGAGCCGTACGCGGCCTGCTACGGCGGGCATCAGTTCGGCAACTGGGCCGGGCAACTGGGCGACGGTCGCGCAATCAC
CTTGGGTGAGGTGCTCAACGGGCAGGGCGGGCGTTGGGAACTGCAACTGAAAGGCGCTGGGCCAACCCCTTATTCCCGGC
GCGCCGACGGGCGTGCGGTGCTGCGGTCCTCGATCCGGGAATTCCTCTGCAGCGAAGCGATGCATCACCTGGGGGTGCCG
ACCACGCGCGCCTTGAGCCTGGTCGGCACCGGCGAAAAGGTCGTGCGCGACATGTTCTACGACGGCAACCCGCAGGCCGA
ACCCGGGGCCATCGTCTGCAGGGTGGCGCCATCCTTCATCCGCTTTGGCAACTTCGAACTGCTGGCGGCGCGGGGCGATC
TCGACCTGCTCAACCGCCTGATCGACTTCACCATCGCGCGCGACTTCCCCGGGATCGAGGGCAGTGCGCGCGACAAGCGG
GCGCGCTGGTTCGAGACGGTATGTGCGCGTACCGCCACGATGGTGGCGCACTGGATGCGGGTCGGTTTCGTCCATGGGGT
GATGAACACCGACAACATGTCTATCCTCGGACTCACGATCGACTACGGCCCTTACGGCTGGGTCGACAACTTCGATCCCG
GCTGGACGCCCAACACCACCGACGCAGGCGGCCGGCGCTACCGGTTTGGCCACCAGCCGAGGATCGCCAACTGGAATCTG
CTCCAGCTGGCGAACGCCCTGTTTCCCGCCTTTGGCAGCACGGAGGCGCTACAGGCGGGGCTGAACACCTACGCGGAGGT
CTATGACCGTGAGAGCAGGGCGATGACCGCCGCAAAGCTGGGGTTGGCGGCGCTCGCCGATGCCGATCTGCCGATGGTGG
ACGCATTGCACGGCTGGATGAAGCGCGCCGAAGTCGACATGACCCTGTTTTTCCGCGCGCTGGCCGAAGTCGATCTCCTG
AAGCCGGATCCGGCGCTGTTCCTCGATGCCTTCTACGATGACGCAAAGCGCCTCGAGACGGCCGAAGAATTCTCCGGCTG
GTTGCGGCTGTATGCGGACCGCTGTCGCCAGGAGGGTCTGGATGCGGACCAGCGGCGGGCGCGCATGAATGCGGCCAACC
CGCGTTACGTCATGCGCAATTACCTGGCGCAGCAGGCCATCGATGCGGCGGAGCAGGGCGATTACGGTCCGGTTCGCAGT
CTGCTGGACGTGATGCGCCGGCCCTACGACGAGCAACCCGAGCGCGCGGCGTACGCGCAGCGCAGGCCCGACTGGGCGCG
CGAGCGCGCCGGGTGTTCGATGCTTTCCTGCAGTTCCTGA

Upstream 100 bases:

>100_bases
TGGCGCGCTCCTTGCTCGGGTATCTGGCCACGCGGCCGAACCATCGCTGTGCGCGTCACTCTGATGATCTAAACCCGACA
AAGCTGCGATCCCCTACCCG

Downstream 100 bases:

>100_bases
ACCGCTTCAGACGAAGGGTGGCACGCCGATCAGGGGGCCGTGCAGGAAGCGCGCGAAAATCGCCCAGGCGACGATGCCGA
GCAACACTGCGGTGGCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MRPLVFDNRFVRELPADPETGPHTRQVAGASYSRVNPTPVAAPHLVAHSAEVAALLGWDESDIASPEFAEVFGGNRLLDG
MEPYAACYGGHQFGNWAGQLGDGRAITLGEVLNGQGGRWELQLKGAGPTPYSRRADGRAVLRSSIREFLCSEAMHHLGVP
TTRALSLVGTGEKVVRDMFYDGNPQAEPGAIVCRVAPSFIRFGNFELLAARGDLDLLNRLIDFTIARDFPGIEGSARDKR
ARWFETVCARTATMVAHWMRVGFVHGVMNTDNMSILGLTIDYGPYGWVDNFDPGWTPNTTDAGGRRYRFGHQPRIANWNL
LQLANALFPAFGSTEALQAGLNTYAEVYDRESRAMTAAKLGLAALADADLPMVDALHGWMKRAEVDMTLFFRALAEVDLL
KPDPALFLDAFYDDAKRLETAEEFSGWLRLYADRCRQEGLDADQRRARMNAANPRYVMRNYLAQQAIDAAEQGDYGPVRS
LLDVMRRPYDEQPERAAYAQRRPDWARERAGCSMLSCSS

Sequences:

>Translated_519_residues
MRPLVFDNRFVRELPADPETGPHTRQVAGASYSRVNPTPVAAPHLVAHSAEVAALLGWDESDIASPEFAEVFGGNRLLDG
MEPYAACYGGHQFGNWAGQLGDGRAITLGEVLNGQGGRWELQLKGAGPTPYSRRADGRAVLRSSIREFLCSEAMHHLGVP
TTRALSLVGTGEKVVRDMFYDGNPQAEPGAIVCRVAPSFIRFGNFELLAARGDLDLLNRLIDFTIARDFPGIEGSARDKR
ARWFETVCARTATMVAHWMRVGFVHGVMNTDNMSILGLTIDYGPYGWVDNFDPGWTPNTTDAGGRRYRFGHQPRIANWNL
LQLANALFPAFGSTEALQAGLNTYAEVYDRESRAMTAAKLGLAALADADLPMVDALHGWMKRAEVDMTLFFRALAEVDLL
KPDPALFLDAFYDDAKRLETAEEFSGWLRLYADRCRQEGLDADQRRARMNAANPRYVMRNYLAQQAIDAAEQGDYGPVRS
LLDVMRRPYDEQPERAAYAQRRPDWARERAGCSMLSCSS
>Mature_519_residues
MRPLVFDNRFVRELPADPETGPHTRQVAGASYSRVNPTPVAAPHLVAHSAEVAALLGWDESDIASPEFAEVFGGNRLLDG
MEPYAACYGGHQFGNWAGQLGDGRAITLGEVLNGQGGRWELQLKGAGPTPYSRRADGRAVLRSSIREFLCSEAMHHLGVP
TTRALSLVGTGEKVVRDMFYDGNPQAEPGAIVCRVAPSFIRFGNFELLAARGDLDLLNRLIDFTIARDFPGIEGSARDKR
ARWFETVCARTATMVAHWMRVGFVHGVMNTDNMSILGLTIDYGPYGWVDNFDPGWTPNTTDAGGRRYRFGHQPRIANWNL
LQLANALFPAFGSTEALQAGLNTYAEVYDRESRAMTAAKLGLAALADADLPMVDALHGWMKRAEVDMTLFFRALAEVDLL
KPDPALFLDAFYDDAKRLETAEEFSGWLRLYADRCRQEGLDADQRRARMNAANPRYVMRNYLAQQAIDAAEQGDYGPVRS
LLDVMRRPYDEQPERAAYAQRRPDWARERAGCSMLSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family

Homologues:

Organism=Homo sapiens, GI32880229, Length=446, Percent_Identity=46.1883408071749, Blast_Score=337, Evalue=2e-92,
Organism=Escherichia coli, GI1787999, Length=492, Percent_Identity=43.0894308943089, Blast_Score=356, Evalue=2e-99,
Organism=Saccharomyces cerevisiae, GI6325034, Length=347, Percent_Identity=39.4812680115274, Blast_Score=227, Evalue=4e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1574_AZOSB (A1K5T6)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_933078.1
- STRING:   A1K5T6
- GeneID:   4608329
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo1574
- eggNOG:   COG0397
- HOGENOM:   HBG683993
- OMA:   FGSYNPR
- PhylomeDB:   A1K5T6
- ProtClustDB:   PRK00029
- BioCyc:   ASP62928:AZO1574-MONOMER
- HAMAP:   MF_00692
- InterPro:   IPR003846

Pfam domain/function: PF02696 UPF0061

EC number: NA

Molecular weight: Translated: 57564; Mature: 57564

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLVFDNRFVRELPADPETGPHTRQVAGASYSRVNPTPVAAPHLVAHSAEVAALLGWDE
CCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHEECCCH
SDIASPEFAEVFGGNRLLDGMEPYAACYGGHQFGNWAGQLGDGRAITLGEVLNGQGGRWE
HCCCCCHHHHHHCCCCCCCCCCHHHHHHCCCHHCCHHCCCCCCCEEEHHHHHCCCCCEEE
LQLKGAGPTPYSRRADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVGTGEKVVRDMFY
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCHHHHHHHHC
DGNPQAEPGAIVCRVAPSFIRFGNFELLAARGDLDLLNRLIDFTIARDFPGIEGSARDKR
CCCCCCCCCEEEEEECHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHH
ARWFETVCARTATMVAHWMRVGFVHGVMNTDNMSILGLTIDYGPYGWVDNFDPGWTPNTT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC
DAGGRRYRFGHQPRIANWNLLQLANALFPAFGSTEALQAGLNTYAEVYDRESRAMTAAKL
CCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAALADADLPMVDALHGWMKRAEVDMTLFFRALAEVDLLKPDPALFLDAFYDDAKRLET
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AEEFSGWLRLYADRCRQEGLDADQRRARMNAANPRYVMRNYLAQQAIDAAEQGDYGPVRS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
LLDVMRRPYDEQPERAAYAQRRPDWARERAGCSMLSCSS
HHHHHHCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRPLVFDNRFVRELPADPETGPHTRQVAGASYSRVNPTPVAAPHLVAHSAEVAALLGWDE
CCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHEECCCH
SDIASPEFAEVFGGNRLLDGMEPYAACYGGHQFGNWAGQLGDGRAITLGEVLNGQGGRWE
HCCCCCHHHHHHCCCCCCCCCCHHHHHHCCCHHCCHHCCCCCCCEEEHHHHHCCCCCEEE
LQLKGAGPTPYSRRADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVGTGEKVVRDMFY
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCHHHHHHHHC
DGNPQAEPGAIVCRVAPSFIRFGNFELLAARGDLDLLNRLIDFTIARDFPGIEGSARDKR
CCCCCCCCCEEEEEECHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHH
ARWFETVCARTATMVAHWMRVGFVHGVMNTDNMSILGLTIDYGPYGWVDNFDPGWTPNTT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC
DAGGRRYRFGHQPRIANWNLLQLANALFPAFGSTEALQAGLNTYAEVYDRESRAMTAAKL
CCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAALADADLPMVDALHGWMKRAEVDMTLFFRALAEVDLLKPDPALFLDAFYDDAKRLET
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AEEFSGWLRLYADRCRQEGLDADQRRARMNAANPRYVMRNYLAQQAIDAAEQGDYGPVRS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
LLDVMRRPYDEQPERAAYAQRRPDWARERAGCSMLSCSS
HHHHHHCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA