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The map label for this gene is yoaA [H]

Identifier: 119897851

GI number: 119897851

Start: 1712686

End: 1714659

Strand: Direct

Name: yoaA [H]

Synonym: azo1560

Alternate gene names: 119897851

Gene position: 1712686-1714659 (Clockwise)

Preceding gene: 119897850

Following gene: 119897852

Centisome position: 39.14

GC content: 69.35

Gene sequence:

>1974_bases
ATGGCCGACATCGCCGCGCTGTTCGCCCCCGACGGCCCGCTCGCCCAGGCGGTGCCGGGCTTCAACGCGCGCCCGCAGCA
GATCGAGATGGCGGGCCGCATCGCCGAGGCGATCCGCGGCAACCGGGTGCTGGTCGCCGAGGCCGGCACCGGCACCGGCA
AGACTTACGCCTATCTGGTGCCGGCGTTGATGGCCGGCGGCAAGGTCATCGTCTCGACCGGCACCAAGACACTGCAGGAC
CAGCTCTTCAACCGCGACCTGCCGACGGTGCGCGCCGCGCTCAAGGTGCCGGTGACGATCGCGCTGCTGAAGGGCCGCGC
CAACTACGTCTGCCCCTACCACCTCGCCCGCAACGAGCGTGACGGCCGCTTCCTCACCGCGCAGGACGCCGCCGACCTGC
GCGCCATCTCGCGCTTCGCCAAGATCACCCAGAGCGGCGACAAGGCCGAATGCACCGAGGTGCGCGAGGATTCCGCGGCC
TGGATCGCCGCCACCTCCACCCGTGACAACTGCCTCGGCCAGGACTGCCCCGACGTCAAGGAATGCTTCGTGATGGCGGC
GCGGCGCAACGCGATGGAGGCTGACGTGGTGGTGGTGAACCATCACCTCTTCTTCGCCGACGTGATGCTGCGTGACGAGG
GCATGGGCGAGTTGCTGCCGGCCTGCAACGCGGTGATCTTCGACGAGGCCCACCAGCTGCCCGAAACCGCCAGCCTGTTC
TTCGGCGAAAGCGTATCCACCGCGCAGGTGCTGGAACTCGCGCGCGACACCCGCTCCGAGGGCGTTGCCGCGGCGCGTGA
CTGTGTTCCGCTGATCGACGAAAGCCGCGCGCTGGAGAAGGCCGCGCGCGACCTGCGGTTGGTCTTCGGCACCGAACAGG
CGCGCATGTCTGCGGCGCAAGCGCAGGAAAAGCCGGATTTCGACAAGCAGCTCGGCGCGCTCGCCGAGGTGCTGGACCGC
TTCCACGCCGTGCTGGAAACGCAGGCCGAGCGTTCCGAGGGTCTCGCCAACTGCCTGCGCCGCACGCAGGAGATGAGCGA
GCGCCTGGTGCGCTGGCGCAACCCGGAAGAGAAGGACCTGATCCGCTGGGTCGAGGTCTTCACCCAGTCGCTCGCGCTCA
ACGCCACGCCGCTGCACGTGTCGGACGTGTTCCGCCGCCAGCTCGAAGGCCATCCGCGCGCGTGGATCTTCACCTCGGCC
ACGCTCGCCGTCGGCCAGGATTTCGGCCACTACTGCCGCGAGCTGGGCCTGGCGTGGATGGACCCGCCGCCGATGACTTC
GGTGTGGGGCAGTCCCTTCGACTATGCCCAGCAGGCGCTGCTGTATGCGCCGCAGGCGATGCCGGAACCGAACTCGCCCG
ATTACCCGGATGCGGTGGCGCGCAAGGCGCTGCCGCTGATCCGTGCCGCGCGCGGCCGCACCTTCGTGCTGTGCACCTCG
CTGCGGGCGATGCGGCGCATCCACGAACTGATCGCCGACGGACTGGAGCGTGCCGGCGACAAGCTGCCGTTGCTGCTGCA
GGGCGAAGGTTCGCGCACCGAGCTGCTGGAGCGCTTCCGCCGGCTGGGCAACGCGGTGCTGGTTGCCAGCCAGAGCTTCT
GGGAGGGCGTGGACGTGCCGGGCGATGCGCTGTCGCTGGTGGTGATCGACAAGTTCCCGTTCGCGCCGCCGGACGATCCG
GTGCTGGCGGCGCGCGTCGAGCACATGGAAAAGCAGGGCCTCAGCCCTTTCATCCATTACCAGCTGCCGCGCGCGGTGAT
CAACATGAAACAGGGCGCCGGCCGCCTGATCCGCACCGAGCGCGATCGCGGCGTGCTGTGCATCTGCGATCCGCGCATGC
TCACCAAGAACTACGGCAAGGTGATCTGGCGCAGCCTGCCGCCGATGAGCCGCACCAAGGAAGAGGCCACCGCCGCGGCC
TTCCTGGAGAAGCTGCCGCCGCCGAAGTCGGGGCCGGGCACGACAGCGGGGTAG

Upstream 100 bases:

>100_bases
GGCCACAACGCGCATGAATTCGTGCGCACCGTCAGCCGGCTGATGGAAATGCGCACCCGCGAATACCTCGCCGAGGCGCA
CCGCACGGAGTAGGGCGGTC

Downstream 100 bases:

>100_bases
CGCGTGGCGTTGCACCGGCGGCTGTCCTTGAGCACGGGCAAGGTTCGCCATCGGCGCCTTGTTGTATGCTCCCGGCTCGA
ATCACTCGAGGCCCCCGCGG

Product: ATP-dependent helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 656

Protein sequence:

>657_residues
MADIAALFAPDGPLAQAVPGFNARPQQIEMAGRIAEAIRGNRVLVAEAGTGTGKTYAYLVPALMAGGKVIVSTGTKTLQD
QLFNRDLPTVRAALKVPVTIALLKGRANYVCPYHLARNERDGRFLTAQDAADLRAISRFAKITQSGDKAECTEVREDSAA
WIAATSTRDNCLGQDCPDVKECFVMAARRNAMEADVVVVNHHLFFADVMLRDEGMGELLPACNAVIFDEAHQLPETASLF
FGESVSTAQVLELARDTRSEGVAAARDCVPLIDESRALEKAARDLRLVFGTEQARMSAAQAQEKPDFDKQLGALAEVLDR
FHAVLETQAERSEGLANCLRRTQEMSERLVRWRNPEEKDLIRWVEVFTQSLALNATPLHVSDVFRRQLEGHPRAWIFTSA
TLAVGQDFGHYCRELGLAWMDPPPMTSVWGSPFDYAQQALLYAPQAMPEPNSPDYPDAVARKALPLIRAARGRTFVLCTS
LRAMRRIHELIADGLERAGDKLPLLLQGEGSRTELLERFRRLGNAVLVASQSFWEGVDVPGDALSLVVIDKFPFAPPDDP
VLAARVEHMEKQGLSPFIHYQLPRAVINMKQGAGRLIRTERDRGVLCICDPRMLTKNYGKVIWRSLPPMSRTKEEATAAA
FLEKLPPPKSGPGTTAG

Sequences:

>Translated_657_residues
MADIAALFAPDGPLAQAVPGFNARPQQIEMAGRIAEAIRGNRVLVAEAGTGTGKTYAYLVPALMAGGKVIVSTGTKTLQD
QLFNRDLPTVRAALKVPVTIALLKGRANYVCPYHLARNERDGRFLTAQDAADLRAISRFAKITQSGDKAECTEVREDSAA
WIAATSTRDNCLGQDCPDVKECFVMAARRNAMEADVVVVNHHLFFADVMLRDEGMGELLPACNAVIFDEAHQLPETASLF
FGESVSTAQVLELARDTRSEGVAAARDCVPLIDESRALEKAARDLRLVFGTEQARMSAAQAQEKPDFDKQLGALAEVLDR
FHAVLETQAERSEGLANCLRRTQEMSERLVRWRNPEEKDLIRWVEVFTQSLALNATPLHVSDVFRRQLEGHPRAWIFTSA
TLAVGQDFGHYCRELGLAWMDPPPMTSVWGSPFDYAQQALLYAPQAMPEPNSPDYPDAVARKALPLIRAARGRTFVLCTS
LRAMRRIHELIADGLERAGDKLPLLLQGEGSRTELLERFRRLGNAVLVASQSFWEGVDVPGDALSLVVIDKFPFAPPDDP
VLAARVEHMEKQGLSPFIHYQLPRAVINMKQGAGRLIRTERDRGVLCICDPRMLTKNYGKVIWRSLPPMSRTKEEATAAA
FLEKLPPPKSGPGTTAG
>Mature_656_residues
ADIAALFAPDGPLAQAVPGFNARPQQIEMAGRIAEAIRGNRVLVAEAGTGTGKTYAYLVPALMAGGKVIVSTGTKTLQDQ
LFNRDLPTVRAALKVPVTIALLKGRANYVCPYHLARNERDGRFLTAQDAADLRAISRFAKITQSGDKAECTEVREDSAAW
IAATSTRDNCLGQDCPDVKECFVMAARRNAMEADVVVVNHHLFFADVMLRDEGMGELLPACNAVIFDEAHQLPETASLFF
GESVSTAQVLELARDTRSEGVAAARDCVPLIDESRALEKAARDLRLVFGTEQARMSAAQAQEKPDFDKQLGALAEVLDRF
HAVLETQAERSEGLANCLRRTQEMSERLVRWRNPEEKDLIRWVEVFTQSLALNATPLHVSDVFRRQLEGHPRAWIFTSAT
LAVGQDFGHYCRELGLAWMDPPPMTSVWGSPFDYAQQALLYAPQAMPEPNSPDYPDAVARKALPLIRAARGRTFVLCTSL
RAMRRIHELIADGLERAGDKLPLLLQGEGSRTELLERFRRLGNAVLVASQSFWEGVDVPGDALSLVVIDKFPFAPPDDPV
LAARVEHMEKQGLSPFIHYQLPRAVINMKQGAGRLIRTERDRGVLCICDPRMLTKNYGKVIWRSLPPMSRTKEEATAAAF
LEKLPPPKSGPGTTAG

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=635, Percent_Identity=45.8267716535433, Blast_Score=535, Evalue=1e-153,
Organism=Escherichia coli, GI1787018, Length=265, Percent_Identity=33.9622641509434, Blast_Score=110, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 72315; Mature: 72183

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIAALFAPDGPLAQAVPGFNARPQQIEMAGRIAEAIRGNRVLVAEAGTGTGKTYAYLV
CCCCEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH
PALMAGGKVIVSTGTKTLQDQLFNRDLPTVRAALKVPVTIALLKGRANYVCPYHLARNER
HHHHCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCCCCCHHHHCCCC
DGRFLTAQDAADLRAISRFAKITQSGDKAECTEVREDSAAWIAATSTRDNCLGQDCPDVK
CCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHH
ECFVMAARRNAMEADVVVVNHHLFFADVMLRDEGMGELLPACNAVIFDEAHQLPETASLF
HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
FGESVSTAQVLELARDTRSEGVAAARDCVPLIDESRALEKAARDLRLVFGTEQARMSAAQ
HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHH
AQEKPDFDKQLGALAEVLDRFHAVLETQAERSEGLANCLRRTQEMSERLVRWRNPEEKDL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IRWVEVFTQSLALNATPLHVSDVFRRQLEGHPRAWIFTSATLAVGQDFGHYCRELGLAWM
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCC
DPPPMTSVWGSPFDYAQQALLYAPQAMPEPNSPDYPDAVARKALPLIRAARGRTFVLCTS
CCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHH
LRAMRRIHELIADGLERAGDKLPLLLQGEGSRTELLERFRRLGNAVLVASQSFWEGVDVP
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCEEEEECHHHHCCCCCC
GDALSLVVIDKFPFAPPDDPVLAARVEHMEKQGLSPFIHYQLPRAVINMKQGAGRLIRTE
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCEEEC
RDRGVLCICDPRMLTKNYGKVIWRSLPPMSRTKEEATAAAFLEKLPPPKSGPGTTAG
CCCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ADIAALFAPDGPLAQAVPGFNARPQQIEMAGRIAEAIRGNRVLVAEAGTGTGKTYAYLV
CCCEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH
PALMAGGKVIVSTGTKTLQDQLFNRDLPTVRAALKVPVTIALLKGRANYVCPYHLARNER
HHHHCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCCCCCHHHHCCCC
DGRFLTAQDAADLRAISRFAKITQSGDKAECTEVREDSAAWIAATSTRDNCLGQDCPDVK
CCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHH
ECFVMAARRNAMEADVVVVNHHLFFADVMLRDEGMGELLPACNAVIFDEAHQLPETASLF
HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
FGESVSTAQVLELARDTRSEGVAAARDCVPLIDESRALEKAARDLRLVFGTEQARMSAAQ
HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHH
AQEKPDFDKQLGALAEVLDRFHAVLETQAERSEGLANCLRRTQEMSERLVRWRNPEEKDL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IRWVEVFTQSLALNATPLHVSDVFRRQLEGHPRAWIFTSATLAVGQDFGHYCRELGLAWM
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCC
DPPPMTSVWGSPFDYAQQALLYAPQAMPEPNSPDYPDAVARKALPLIRAARGRTFVLCTS
CCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHH
LRAMRRIHELIADGLERAGDKLPLLLQGEGSRTELLERFRRLGNAVLVASQSFWEGVDVP
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCEEEEECHHHHCCCCCC
GDALSLVVIDKFPFAPPDDPVLAARVEHMEKQGLSPFIHYQLPRAVINMKQGAGRLIRTE
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCEEEC
RDRGVLCICDPRMLTKNYGKVIWRSLPPMSRTKEEATAAAFLEKLPPPKSGPGTTAG
CCCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]