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The map label for this gene is afg [H]

Identifier: 119897850

GI number: 119897850

Start: 1711473

End: 1712678

Strand: Direct

Name: afg [H]

Synonym: azo1559

Alternate gene names: 119897850

Gene position: 1711473-1712678 (Clockwise)

Preceding gene: 119897848

Following gene: 119897851

Centisome position: 39.11

GC content: 65.34

Gene sequence:

>1206_bases
TTGCACTACAATTCCCGGCTCGATCGAGCCCCCGCGGCCGAACGCGGGAGGCGCCGGATACGCGCGGATTTCCTGCGCGC
GGCCTTTACCGACATGCCCCATCGCACCCTCAAAGTCTCCGAACACGGCGTGCTGGATGCCTACGAGGCCCAGTTGCGCG
CCCGCGGTTTCAAGTCCGACCCGGCGCAGCGTGCCGCAATGCAGCGTCTGCAGCAGCTATACGGCGAATTGCTCGGCTTC
AAGGTCGCGCGCAGCAGCGCGCTGCGCCGCATGCTCACGCGGCCGCACATGCCGCGCAGCGTGTATTTCTGGGGCGGCGT
GGGGCGTGGCAAGAGCTTCCTGATGGACTGCTTCTTCGAGGCGGTGCCCTACAAGCGCAAGCGCCGGGTGCACTTCCATG
CCTTCATGCAGGAAGTGCAGAACGACCTCAAGAACCACAACAACGAGCCCGATCCGCTGCAGAAGGTGGCCGACCGCATC
GCGCGCGAAACCCGGCTGCTGTGCTTCGACGAGTTCCACGTGTCCGACATCGCCGACGCGATGATCCTCGGCCGCCTGCT
CGAAGCGCTGTTCACCCGCGGCGTGATCTTCGTGATGACCTCCAACTACCCCCCGGATGGTCTCTATCCCAACGGCCTGA
TGCGGGTGAATTTCCTGCCGACGATCGAGATGATCAAGCGCCGCTTCGATGTCGTCGAAGTGGATCACGGCACCGACTAC
CGCCTGCGCACGCTGGAGAAGATCGAGATCTTCCTGGTGCCGGCGGACGACGAAGCCGATCGCAAGATGCGCGAGGATTT
CCGCCGCCTCGCCGCCACCGATGGGGACAGCGGCGAGATTGCGCTCAACGAACGCAAGCTGCCGGTGGTGCGCAAGGCGC
CCGGGGTGATCTGGTTCGACTTCGCCACGCTGTGCGGCGGACCCCGCTCGCAGAACGACTACCTCGAGATCGCCCGCGAG
CACCACACGCTGTTCCTGTCGAAGGTGCCGAAGATGCTGGCCGGCAACGCCTCCGAGGCGCGCCGCTTCACCTGGCTGAT
CGACGTGCTGTACGACCACCGCGTCAAGCTCATCCTCAGCGCCGAGGTCGAGGCCTACGAGCTGTACACCGAGGGCCACA
ACGCGCATGAATTCGTGCGCACCGTCAGCCGGCTGATGGAAATGCGCACCCGCGAATACCTCGCCGAGGCGCACCGCACG
GAGTAG

Upstream 100 bases:

>100_bases
GGCACGACGAAAATTGGCGTTTGTGCGTCGCAGCATAACGTTCGGCCGAGGTCTGGGCAAGCATCTCCGACAGGCAAAAT
CAGGGCCCGGAGGCGGGCTC

Downstream 100 bases:

>100_bases
GGCGGTCATGGCCGACATCGCCGCGCTGTTCGCCCCCGACGGCCCGCTCGCCCAGGCGGTGCCGGGCTTCAACGCGCGCC
CGCAGCAGATCGAGATGGCG

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MHYNSRLDRAPAAERGRRRIRADFLRAAFTDMPHRTLKVSEHGVLDAYEAQLRARGFKSDPAQRAAMQRLQQLYGELLGF
KVARSSALRRMLTRPHMPRSVYFWGGVGRGKSFLMDCFFEAVPYKRKRRVHFHAFMQEVQNDLKNHNNEPDPLQKVADRI
ARETRLLCFDEFHVSDIADAMILGRLLEALFTRGVIFVMTSNYPPDGLYPNGLMRVNFLPTIEMIKRRFDVVEVDHGTDY
RLRTLEKIEIFLVPADDEADRKMREDFRRLAATDGDSGEIALNERKLPVVRKAPGVIWFDFATLCGGPRSQNDYLEIARE
HHTLFLSKVPKMLAGNASEARRFTWLIDVLYDHRVKLILSAEVEAYELYTEGHNAHEFVRTVSRLMEMRTREYLAEAHRT
E

Sequences:

>Translated_401_residues
MHYNSRLDRAPAAERGRRRIRADFLRAAFTDMPHRTLKVSEHGVLDAYEAQLRARGFKSDPAQRAAMQRLQQLYGELLGF
KVARSSALRRMLTRPHMPRSVYFWGGVGRGKSFLMDCFFEAVPYKRKRRVHFHAFMQEVQNDLKNHNNEPDPLQKVADRI
ARETRLLCFDEFHVSDIADAMILGRLLEALFTRGVIFVMTSNYPPDGLYPNGLMRVNFLPTIEMIKRRFDVVEVDHGTDY
RLRTLEKIEIFLVPADDEADRKMREDFRRLAATDGDSGEIALNERKLPVVRKAPGVIWFDFATLCGGPRSQNDYLEIARE
HHTLFLSKVPKMLAGNASEARRFTWLIDVLYDHRVKLILSAEVEAYELYTEGHNAHEFVRTVSRLMEMRTREYLAEAHRT
E
>Mature_401_residues
MHYNSRLDRAPAAERGRRRIRADFLRAAFTDMPHRTLKVSEHGVLDAYEAQLRARGFKSDPAQRAAMQRLQQLYGELLGF
KVARSSALRRMLTRPHMPRSVYFWGGVGRGKSFLMDCFFEAVPYKRKRRVHFHAFMQEVQNDLKNHNNEPDPLQKVADRI
ARETRLLCFDEFHVSDIADAMILGRLLEALFTRGVIFVMTSNYPPDGLYPNGLMRVNFLPTIEMIKRRFDVVEVDHGTDY
RLRTLEKIEIFLVPADDEADRKMREDFRRLAATDGDSGEIALNERKLPVVRKAPGVIWFDFATLCGGPRSQNDYLEIARE
HHTLFLSKVPKMLAGNASEARRFTWLIDVLYDHRVKLILSAEVEAYELYTEGHNAHEFVRTVSRLMEMRTREYLAEAHRT
E

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=408, Percent_Identity=34.8039215686275, Blast_Score=242, Evalue=4e-64,
Organism=Escherichia coli, GI1789627, Length=363, Percent_Identity=43.5261707988981, Blast_Score=284, Evalue=8e-78,
Organism=Caenorhabditis elegans, GI17505769, Length=410, Percent_Identity=32.6829268292683, Blast_Score=201, Evalue=6e-52,
Organism=Saccharomyces cerevisiae, GI6320783, Length=318, Percent_Identity=33.0188679245283, Blast_Score=162, Evalue=9e-41,
Organism=Drosophila melanogaster, GI20129913, Length=419, Percent_Identity=32.6968973747017, Blast_Score=195, Evalue=5e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 46659; Mature: 46659

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYNSRLDRAPAAERGRRRIRADFLRAAFTDMPHRTLKVSEHGVLDAYEAQLRARGFKSD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCC
PAQRAAMQRLQQLYGELLGFKVARSSALRRMLTRPHMPRSVYFWGGVGRGKSFLMDCFFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHH
AVPYKRKRRVHFHAFMQEVQNDLKNHNNEPDPLQKVADRIARETRLLCFDEFHVSDIADA
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEHHHHHHHHHHH
MILGRLLEALFTRGVIFVMTSNYPPDGLYPNGLMRVNFLPTIEMIKRRFDVVEVDHGTDY
HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHCCEEEECCCCCH
RLRTLEKIEIFLVPADDEADRKMREDFRRLAATDGDSGEIALNERKLPVVRKAPGVIWFD
HHEEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEE
FATLCGGPRSQNDYLEIAREHHTLFLSKVPKMLAGNASEARRFTWLIDVLYDHRVKLILS
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEE
AEVEAYELYTEGHNAHEFVRTVSRLMEMRTREYLAEAHRTE
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHYNSRLDRAPAAERGRRRIRADFLRAAFTDMPHRTLKVSEHGVLDAYEAQLRARGFKSD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCC
PAQRAAMQRLQQLYGELLGFKVARSSALRRMLTRPHMPRSVYFWGGVGRGKSFLMDCFFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHH
AVPYKRKRRVHFHAFMQEVQNDLKNHNNEPDPLQKVADRIARETRLLCFDEFHVSDIADA
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEHHHHHHHHHHH
MILGRLLEALFTRGVIFVMTSNYPPDGLYPNGLMRVNFLPTIEMIKRRFDVVEVDHGTDY
HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHCCEEEECCCCCH
RLRTLEKIEIFLVPADDEADRKMREDFRRLAATDGDSGEIALNERKLPVVRKAPGVIWFD
HHEEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEE
FATLCGGPRSQNDYLEIAREHHTLFLSKVPKMLAGNASEARRFTWLIDVLYDHRVKLILS
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEE
AEVEAYELYTEGHNAHEFVRTVSRLMEMRTREYLAEAHRTE
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]