| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is 119897811
Identifier: 119897811
GI number: 119897811
Start: 1665304
End: 1666938
Strand: Reverse
Name: 119897811
Synonym: azo1520
Alternate gene names: NA
Gene position: 1666938-1665304 (Counterclockwise)
Preceding gene: 119897812
Following gene: 119897810
Centisome position: 38.09
GC content: 70.52
Gene sequence:
>1635_bases GTGTCCGAAACATCCCTGCTGAAGCGACGCATCTACGGCACGCTCGGCCTCAGTGTGCTGGTCCTGCTCTACCTGCTCGT CGGCCTGACCGGACACGACCCCTGGCGCGGGGACGATGCGCGCTACTTCGGTCCCATCCACGCGATCCTTCAGGGCGAAG GCTGGCTGTTCCCGCACATCGCCGGCGAACCCTTCGCCGACTTCCCACCGCTGTACTACTGGACCGCCGCCGCGCTGGCG TGGGCCTTCAAGCTGGTACTGCCAGTACACGACGGCGCCCGGCTCGCCAGCGCGCTGTTTACCGCCCTCGCGATCTACTG GATCGCTCGCGCTGCCGAACGCCTGCACGGCCGCCCGGCGCGCACCCCGGCGGCCATGCTCACGCTCGGCTCGCTCGGCT TGGTACTGCACGCACACGAAACCCAGCCGATGATCGCGCTGATGGCGATGCTGGCCCTGGTGCTGGCCGGCCTCGCGCGC GTGCCGCGCGAACCGCTCGCCGGCGGCCTGCAAGCCGGCGCCGGCGCCGCCCTCGCGGTGCTGGCGGGCGGACTGCCGGG CGCCATTCTGACCATCCCGCTGTTTCCGCTCGCGATCGCCGCCAGCCCCGACTGCCGCGACCCGCGCAGCAGCGGCGGGC TGGTGGCGGGCCTGTCGCTCGCACTCGGGCTGGGCGCGCTGTGGCCGGTCGCGGTACATATCGTCGCGCCGGAGTTGCTT TCGCTGTGGCTGCGCGAGGAATGGCGCCAGCTCTCGGAAGGACCGCTCTCGCTCGACGAGACAGGGCGGCTGCTCGAGCT GATCGGCTGGTTCGTCTGGCCCTTGTGGCCGATCGCGCTATGGGGCCTGTGGCGAGGCCGCCGTCGTATCACCGCGCTGC AGTGGATGCTGCCGCTGCTGTCGCTGCTGCTGACTGTCGGCCTGCTCTATGCCACCGGCGACGTCTCGCCGACCGCAGCG CTTCCCTTGATCCCGGCGGTCGCGCTGCTGGCCGCCGGCGGTGCGCCCACCCTGCGGCGCGGCGCGGCCAACGCGTTCGA CTGGTTCGCGGTCATGACTTTCGCCGTGTTCGCGGTGCTGGTCTGGATCGCCTGGACCGCCCAGGTCTTCGCCTGGCCGC CAGGGCTGGCGCGTCACGTTGCGAAGGTGATGCCCAACTTCGTGCTGCACGGCGGCCTGGGTCAGGCCGTCCTCGCCGGG AGCATCTGCCTGGCGTGGATCGCCCTGGTGTGGCAACTGCCTCGCAGCACGTCGCGCGGCCCGGCCGCCTGGGCGCTGGG CATGACGATGCTGTGGTGCGTCGCGGTGGTGCTGCTGATGCCCTGGTTCGATTACGGGCGCAGCTATCGCCCGGCGGCGC GTGCGCTCGCCGCCGCGCTCGAACGCCATCCGGAAGACTGCATCGCGACGACCGGCCTGCCCGATGCGGTGCGCAGCTCC CTCGACTACTACGCCGGCATACGGACGATGCCGATCCGCGGCAACAGCACGAGTTGCAGGTTGTTACTCATCTACGAGGA GCGCCGCCCCGGCGCGCAGGCGCCTGCGCCTGAATGGCATACAATCTGGGAGTACCGCCGGGGTGGCGGAAAGCAACTCG AAATCTTCCGGCTCTATCGCCGCCAGTCATCGTGA
Upstream 100 bases:
>100_bases ATCCAGCCCCCGAAGCCCCCGTTTTCAGCCGCGGCACCCGCGCCAAACGGGGGCCGTGCACACCAGCTCACGCCCAACCA GAACAAGCATGACAAGCGAC
Downstream 100 bases:
>100_bases CCGACACCTTTACTCCTCCTCAGCGTCTTCCGGTCTGGTCCTCTCTCGAGCAACACGCAGCGCGCCTGCGCGCGACCCGC GTGCGCACGCTGTTCGACAC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Inner Membrane Transmembrane Protein; Inner Membrane Protein; Glycosyltransferase; 4-Amino-4-Deoxy-L-Arabinose Transferase; PMT Family Glycosyltransferase; Glycosyltransferase Pmt Family
Number of amino acids: Translated: 544; Mature: 543
Protein sequence:
>544_residues MSETSLLKRRIYGTLGLSVLVLLYLLVGLTGHDPWRGDDARYFGPIHAILQGEGWLFPHIAGEPFADFPPLYYWTAAALA WAFKLVLPVHDGARLASALFTALAIYWIARAAERLHGRPARTPAAMLTLGSLGLVLHAHETQPMIALMAMLALVLAGLAR VPREPLAGGLQAGAGAALAVLAGGLPGAILTIPLFPLAIAASPDCRDPRSSGGLVAGLSLALGLGALWPVAVHIVAPELL SLWLREEWRQLSEGPLSLDETGRLLELIGWFVWPLWPIALWGLWRGRRRITALQWMLPLLSLLLTVGLLYATGDVSPTAA LPLIPAVALLAAGGAPTLRRGAANAFDWFAVMTFAVFAVLVWIAWTAQVFAWPPGLARHVAKVMPNFVLHGGLGQAVLAG SICLAWIALVWQLPRSTSRGPAAWALGMTMLWCVAVVLLMPWFDYGRSYRPAARALAAALERHPEDCIATTGLPDAVRSS LDYYAGIRTMPIRGNSTSCRLLLIYEERRPGAQAPAPEWHTIWEYRRGGGKQLEIFRLYRRQSS
Sequences:
>Translated_544_residues MSETSLLKRRIYGTLGLSVLVLLYLLVGLTGHDPWRGDDARYFGPIHAILQGEGWLFPHIAGEPFADFPPLYYWTAAALA WAFKLVLPVHDGARLASALFTALAIYWIARAAERLHGRPARTPAAMLTLGSLGLVLHAHETQPMIALMAMLALVLAGLAR VPREPLAGGLQAGAGAALAVLAGGLPGAILTIPLFPLAIAASPDCRDPRSSGGLVAGLSLALGLGALWPVAVHIVAPELL SLWLREEWRQLSEGPLSLDETGRLLELIGWFVWPLWPIALWGLWRGRRRITALQWMLPLLSLLLTVGLLYATGDVSPTAA LPLIPAVALLAAGGAPTLRRGAANAFDWFAVMTFAVFAVLVWIAWTAQVFAWPPGLARHVAKVMPNFVLHGGLGQAVLAG SICLAWIALVWQLPRSTSRGPAAWALGMTMLWCVAVVLLMPWFDYGRSYRPAARALAAALERHPEDCIATTGLPDAVRSS LDYYAGIRTMPIRGNSTSCRLLLIYEERRPGAQAPAPEWHTIWEYRRGGGKQLEIFRLYRRQSS >Mature_543_residues SETSLLKRRIYGTLGLSVLVLLYLLVGLTGHDPWRGDDARYFGPIHAILQGEGWLFPHIAGEPFADFPPLYYWTAAALAW AFKLVLPVHDGARLASALFTALAIYWIARAAERLHGRPARTPAAMLTLGSLGLVLHAHETQPMIALMAMLALVLAGLARV PREPLAGGLQAGAGAALAVLAGGLPGAILTIPLFPLAIAASPDCRDPRSSGGLVAGLSLALGLGALWPVAVHIVAPELLS LWLREEWRQLSEGPLSLDETGRLLELIGWFVWPLWPIALWGLWRGRRRITALQWMLPLLSLLLTVGLLYATGDVSPTAAL PLIPAVALLAAGGAPTLRRGAANAFDWFAVMTFAVFAVLVWIAWTAQVFAWPPGLARHVAKVMPNFVLHGGLGQAVLAGS ICLAWIALVWQLPRSTSRGPAAWALGMTMLWCVAVVLLMPWFDYGRSYRPAARALAAALERHPEDCIATTGLPDAVRSSL DYYAGIRTMPIRGNSTSCRLLLIYEERRPGAQAPAPEWHTIWEYRRGGGKQLEIFRLYRRQSS
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59035; Mature: 58904
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETSLLKRRIYGTLGLSVLVLLYLLVGLTGHDPWRGDDARYFGPIHAILQGEGWLFPHI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCC AGEPFADFPPLYYWTAAALAWAFKLVLPVHDGARLASALFTALAIYWIARAAERLHGRPA CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RTPAAMLTLGSLGLVLHAHETQPMIALMAMLALVLAGLARVPREPLAGGLQAGAGAALAV CCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHH LAGGLPGAILTIPLFPLAIAASPDCRDPRSSGGLVAGLSLALGLGALWPVAVHIVAPELL HHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SLWLREEWRQLSEGPLSLDETGRLLELIGWFVWPLWPIALWGLWRGRRRITALQWMLPLL HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH SLLLTVGLLYATGDVSPTAALPLIPAVALLAAGGAPTLRRGAANAFDWFAVMTFAVFAVL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHH VWIAWTAQVFAWPPGLARHVAKVMPNFVLHGGLGQAVLAGSICLAWIALVWQLPRSTSRG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC PAAWALGMTMLWCVAVVLLMPWFDYGRSYRPAARALAAALERHPEDCIATTGLPDAVRSS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHCCCCHHHHHHH LDYYAGIRTMPIRGNSTSCRLLLIYEERRPGAQAPAPEWHTIWEYRRGGGKQLEIFRLYR HHHHCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH RQSS HCCC >Mature Secondary Structure SETSLLKRRIYGTLGLSVLVLLYLLVGLTGHDPWRGDDARYFGPIHAILQGEGWLFPHI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCC AGEPFADFPPLYYWTAAALAWAFKLVLPVHDGARLASALFTALAIYWIARAAERLHGRPA CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RTPAAMLTLGSLGLVLHAHETQPMIALMAMLALVLAGLARVPREPLAGGLQAGAGAALAV CCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHH LAGGLPGAILTIPLFPLAIAASPDCRDPRSSGGLVAGLSLALGLGALWPVAVHIVAPELL HHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SLWLREEWRQLSEGPLSLDETGRLLELIGWFVWPLWPIALWGLWRGRRRITALQWMLPLL HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH SLLLTVGLLYATGDVSPTAALPLIPAVALLAAGGAPTLRRGAANAFDWFAVMTFAVFAVL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHH VWIAWTAQVFAWPPGLARHVAKVMPNFVLHGGLGQAVLAGSICLAWIALVWQLPRSTSRG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC PAAWALGMTMLWCVAVVLLMPWFDYGRSYRPAARALAAALERHPEDCIATTGLPDAVRSS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHCCCCHHHHHHH LDYYAGIRTMPIRGNSTSCRLLLIYEERRPGAQAPAPEWHTIWEYRRGGGKQLEIFRLYR HHHHCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHH RQSS HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA