Click here to switch to the map view.

The map label for this gene is 119897707

Identifier: 119897707

GI number: 119897707

Start: 1548062

End: 1548553

Strand: Direct

Name: 119897707

Synonym: azo1416

Alternate gene names: NA

Gene position: 1548062-1548553 (Clockwise)

Preceding gene: 119897706

Following gene: 119897710

Centisome position: 35.38

GC content: 70.73

Gene sequence:

>492_bases
ATGAGCATGCAGCTTGTCGTGATCGCGGTGGGCAACGATGCGCGTGGCGACGACGCGCTCGGCCCGCTGCTGCTCGACCG
CGTCGTGAAGGCGGGCTTCCCCGGCGTGCGGGCGCAGCTCGAATTCCAGCTCCAGGTGGAGCACGCGCTCGACATCTCCG
GGGCCGGGCTCGTGCTGTTCATCGATGCGGCCCATGGTCTGCATACGCCTTACGAGTTAAGCGAACTCGAGCCCGCCCGG
GCCACGCCGGCGTTCAGCCATGCGCTTGCGCCGGCCGCGGTGCTGGCCGTGCTGGAACAGCTGGAGGGACATGCGCCGCC
GGCTTTCCTGCTGCGCGTGCGGGGCGAGCAGTTCGGCCTGGGCGACAGTCTTTCGCCCCTGGCCGAAGCGGCCCTGCCGT
TGGCGTGGGAACTGCTGGCGACCTTGCTGTCGGCGCCCTCGCTGGCGGCGTGGCGGCGCCTGCTACGGGTGCAACTGCCG
CAGCCCTCCTAG

Upstream 100 bases:

>100_bases
AGGATGCCGCTGGAGCTCGCGCTGGTGGGGGCCGACGGCGCACTGATCGAGCGGGTGCTGCGGGATTGATGCCGCCGGCA
AAGGCGCGGCAACGGGAGAA

Downstream 100 bases:

>100_bases
TTTGGGAGCTCAGGCGATCCGCAGGTTGGGGAAGAAGGCGGCGACGTAGGCGGCGAGGTTGAGTTCGGCGTCCTCGCGGA
CCCGGCTGAGGCTGTCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: HoxW Protein; [NiFe] Hydrogenase C-Terminal Protease; Hydrogenase Maturation Factor HowW

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSMQLVVIAVGNDARGDDALGPLLLDRVVKAGFPGVRAQLEFQLQVEHALDISGAGLVLFIDAAHGLHTPYELSELEPAR
ATPAFSHALAPAAVLAVLEQLEGHAPPAFLLRVRGEQFGLGDSLSPLAEAALPLAWELLATLLSAPSLAAWRRLLRVQLP
QPS

Sequences:

>Translated_163_residues
MSMQLVVIAVGNDARGDDALGPLLLDRVVKAGFPGVRAQLEFQLQVEHALDISGAGLVLFIDAAHGLHTPYELSELEPAR
ATPAFSHALAPAAVLAVLEQLEGHAPPAFLLRVRGEQFGLGDSLSPLAEAALPLAWELLATLLSAPSLAAWRRLLRVQLP
QPS
>Mature_162_residues
SMQLVVIAVGNDARGDDALGPLLLDRVVKAGFPGVRAQLEFQLQVEHALDISGAGLVLFIDAAHGLHTPYELSELEPARA
TPAFSHALAPAAVLAVLEQLEGHAPPAFLLRVRGEQFGLGDSLSPLAEAALPLAWELLATLLSAPSLAAWRRLLRVQLPQ
PS

Specific function: Unknown

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17258; Mature: 17127

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMQLVVIAVGNDARGDDALGPLLLDRVVKAGFPGVRAQLEFQLQVEHALDISGAGLVLF
CCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHCCCCCCCEEEE
IDAAHGLHTPYELSELEPARATPAFSHALAPAAVLAVLEQLEGHAPPAFLLRVRGEQFGL
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
GDSLSPLAEAALPLAWELLATLLSAPSLAAWRRLLRVQLPQPS
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SMQLVVIAVGNDARGDDALGPLLLDRVVKAGFPGVRAQLEFQLQVEHALDISGAGLVLF
CCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHCCCCCCCEEEE
IDAAHGLHTPYELSELEPARATPAFSHALAPAAVLAVLEQLEGHAPPAFLLRVRGEQFGL
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
GDSLSPLAEAALPLAWELLATLLSAPSLAAWRRLLRVQLPQPS
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA