| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
Click here to switch to the map view.
The map label for this gene is folD
Identifier: 119897668
GI number: 119897668
Start: 1504697
End: 1505572
Strand: Direct
Name: folD
Synonym: azo1377
Alternate gene names: 119897668
Gene position: 1504697-1505572 (Clockwise)
Preceding gene: 119897667
Following gene: 119897669
Centisome position: 34.38
GC content: 66.89
Gene sequence:
>876_bases ATGAGCGCTCGCATTATCGATGGCAACGCCCTGGCGGCGCGCGTGCGTGGCGAAATTGCCGCGCGTGCGGCGGCGCTCAC GGATCGCGGCACCCAGCCGTGCCTCGCGGTTCTACTCGTCGGCGAAAATCCGGCATCGGCGGTCTATGTGCGCAGCAAGG TCGCTGCGTGCGAGAAGGCCGGCATCCGCTCGCTGCGCTTCGACTATCCGCAGGACGTCGATCCCGCGGTCGTCATGGAG AAGCTGGCCGCGCTCAACGCCGATCCGTCGGTGCATGGCATCCTCGTGCAACTGCCGCTGCCGCCGCAGTTCGACGAGGC GGCAGTGTTGGAGGCGATCAGCGTCGCCAAGGATGTCGACGGCTTTCATGCCGAGAATGTCGGCCGTCTGTCGCAGAACC AGGAAGCCTTTCTGCCCTGTACTCCCCACGGCGTCATGAAGATGCTGGAAGCCGAGGGCGTTCCGCTTGCCGGCGCAGAG GCGGTGGTGATCGGCCGCTCCAACATCGTCGGCAAGCCGATGGCCATGTTGCTGACCAACGCCGGCGCCACCGTCACCGT GTGCCACTCGAGGACGCGCGACCTGCGCTTCCATACCGGCCGCGCCGACATCGTGGTTGCTGCCATCGGCAAGCCGCGCT TCGTCACCGGCGACATGCTCAAGCCGGGTGCGACGGTGATCGACGTCGGCATCAACCGCATCACCGACGGACCGGAAGCG GGCAAGCTCTGCGGCGATGTGGATTTCGCGTCTGCCAGCGAGGTGGCCGGGCTGATTACGCCAGTGCCGGGCGGGGTGGG GCCGATGACCATCACCATGCTGCTCGAAAACACCGTGATTTCGGCCGAGCGCAGCGCCCGCGCTGCGGGCAAGTGA
Upstream 100 bases:
>100_bases GGCCTCGGTCCGCTGAGGCGCTCGCTGGGGCACGGCGAGACAACGCACGCAACGCCCTGATAGTGCGATAAAATTGCGAG CTTTTTTCGAGGCACTCCCT
Downstream 100 bases:
>100_bases GGCGGGCATGAGCGAACAGCAGACGTCCGCCGCGCCCGTCGTCGGAATCATCATGGGCTCGAACTCCGACTGGCCCACCA TGCAGGCAGCCGCCAAGATC
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSARIIDGNALAARVRGEIAARAAALTDRGTQPCLAVLLVGENPASAVYVRSKVAACEKAGIRSLRFDYPQDVDPAVVME KLAALNADPSVHGILVQLPLPPQFDEAAVLEAISVAKDVDGFHAENVGRLSQNQEAFLPCTPHGVMKMLEAEGVPLAGAE AVVIGRSNIVGKPMAMLLTNAGATVTVCHSRTRDLRFHTGRADIVVAAIGKPRFVTGDMLKPGATVIDVGINRITDGPEA GKLCGDVDFASASEVAGLITPVPGGVGPMTITMLLENTVISAERSARAAGK
Sequences:
>Translated_291_residues MSARIIDGNALAARVRGEIAARAAALTDRGTQPCLAVLLVGENPASAVYVRSKVAACEKAGIRSLRFDYPQDVDPAVVME KLAALNADPSVHGILVQLPLPPQFDEAAVLEAISVAKDVDGFHAENVGRLSQNQEAFLPCTPHGVMKMLEAEGVPLAGAE AVVIGRSNIVGKPMAMLLTNAGATVTVCHSRTRDLRFHTGRADIVVAAIGKPRFVTGDMLKPGATVIDVGINRITDGPEA GKLCGDVDFASASEVAGLITPVPGGVGPMTITMLLENTVISAERSARAAGK >Mature_290_residues SARIIDGNALAARVRGEIAARAAALTDRGTQPCLAVLLVGENPASAVYVRSKVAACEKAGIRSLRFDYPQDVDPAVVMEK LAALNADPSVHGILVQLPLPPQFDEAAVLEAISVAKDVDGFHAENVGRLSQNQEAFLPCTPHGVMKMLEAEGVPLAGAEA VVIGRSNIVGKPMAMLLTNAGATVTVCHSRTRDLRFHTGRADIVVAAIGKPRFVTGDMLKPGATVIDVGINRITDGPEAG KLCGDVDFASASEVAGLITPVPGGVGPMTITMLLENTVISAERSARAAGK
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222418558, Length=295, Percent_Identity=45.0847457627119, Blast_Score=234, Evalue=6e-62, Organism=Homo sapiens, GI222136639, Length=290, Percent_Identity=43.1034482758621, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI94721354, Length=298, Percent_Identity=45.6375838926174, Blast_Score=232, Evalue=3e-61, Organism=Homo sapiens, GI36796743, Length=199, Percent_Identity=27.6381909547739, Blast_Score=76, Evalue=4e-14, Organism=Escherichia coli, GI1786741, Length=280, Percent_Identity=51.7857142857143, Blast_Score=273, Evalue=1e-74, Organism=Caenorhabditis elegans, GI17568735, Length=293, Percent_Identity=39.2491467576792, Blast_Score=200, Evalue=6e-52, Organism=Saccharomyces cerevisiae, GI6319558, Length=288, Percent_Identity=45.1388888888889, Blast_Score=251, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6321643, Length=305, Percent_Identity=42.9508196721311, Blast_Score=238, Evalue=9e-64, Organism=Saccharomyces cerevisiae, GI6322933, Length=293, Percent_Identity=28.6689419795222, Blast_Score=87, Evalue=4e-18, Organism=Drosophila melanogaster, GI17136816, Length=295, Percent_Identity=46.7796610169492, Blast_Score=246, Evalue=1e-65, Organism=Drosophila melanogaster, GI17136818, Length=295, Percent_Identity=46.7796610169492, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI62472483, Length=289, Percent_Identity=47.0588235294118, Blast_Score=238, Evalue=4e-63, Organism=Drosophila melanogaster, GI45551871, Length=289, Percent_Identity=47.0588235294118, Blast_Score=238, Evalue=4e-63, Organism=Drosophila melanogaster, GI24645718, Length=289, Percent_Identity=47.0588235294118, Blast_Score=238, Evalue=4e-63, Organism=Drosophila melanogaster, GI17137370, Length=289, Percent_Identity=47.0588235294118, Blast_Score=238, Evalue=4e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_AZOSB (A1K589)
Other databases:
- EMBL: AM406670 - RefSeq: YP_932881.1 - ProteinModelPortal: A1K589 - SMR: A1K589 - STRING: A1K589 - GeneID: 4608767 - GenomeReviews: AM406670_GR - KEGG: azo:azo1377 - eggNOG: COG0190 - HOGENOM: HBG328751 - OMA: CLMMLRD - PhylomeDB: A1K589 - ProtClustDB: PRK14189 - BioCyc: ASP62928:AZO1377-MONOMER - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 30187; Mature: 30056
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARIIDGNALAARVRGEIAARAAALTDRGTQPCLAVLLVGENPASAVYVRSKVAACEKA CCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHH GIRSLRFDYPQDVDPAVVMEKLAALNADPSVHGILVQLPLPPQFDEAAVLEAISVAKDVD CCCCEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCC GFHAENVGRLSQNQEAFLPCTPHGVMKMLEAEGVPLAGAEAVVIGRSNIVGKPMAMLLTN CCCCCCCHHCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHEEEC AGATVTVCHSRTRDLRFHTGRADIVVAAIGKPRFVTGDMLKPGATVIDVGINRITDGPEA CCCEEEEEECCCCCEEEECCCCEEEEEECCCCCEEECCCCCCCCEEEECCCHHCCCCCCC GKLCGDVDFASASEVAGLITPVPGGVGPMTITMLLENTVISAERSARAAGK CCCCCCCCCCCHHHHCEEEECCCCCCCHHEEEEEHHHHHHHCHHHHHCCCC >Mature Secondary Structure SARIIDGNALAARVRGEIAARAAALTDRGTQPCLAVLLVGENPASAVYVRSKVAACEKA CCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHH GIRSLRFDYPQDVDPAVVMEKLAALNADPSVHGILVQLPLPPQFDEAAVLEAISVAKDVD CCCCEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCC GFHAENVGRLSQNQEAFLPCTPHGVMKMLEAEGVPLAGAEAVVIGRSNIVGKPMAMLLTN CCCCCCCHHCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHEEEC AGATVTVCHSRTRDLRFHTGRADIVVAAIGKPRFVTGDMLKPGATVIDVGINRITDGPEA CCCEEEEEECCCCCEEEECCCCEEEEEECCCCCEEECCCCCCCCEEEECCCHHCCCCCCC GKLCGDVDFASASEVAGLITPVPGGVGPMTITMLLENTVISAERSARAAGK CCCCCCCCCCCHHHHCEEEECCCCCCCHHEEEEEHHHHHHHCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA