Definition Azoarcus sp. BH72 chromosome, complete genome.
Accession NC_008702
Length 4,376,040

Click here to switch to the map view.

The map label for this gene is yjeS [H]

Identifier: 119897536

GI number: 119897536

Start: 1341000

End: 1342058

Strand: Direct

Name: yjeS [H]

Synonym: azo1245

Alternate gene names: 119897536

Gene position: 1341000-1342058 (Clockwise)

Preceding gene: 119897533

Following gene: 119897538

Centisome position: 30.64

GC content: 70.92

Gene sequence:

>1059_bases
GTGACAGGGGCGGACGCGGAACACCTGGCCGGGCTGGTGCAGCGCATCCGCGAATGGGGCAAGGCGCTGGGCTTCAGCGC
GGTGACGATCGGCGGGGTGGACCTCGCGGATGCGGAACCGGGCCTGATGGACTGGCTGGCGGCCGGTTTTCACGGCGAGA
TGGATTATATGGCGCGCCACGGGCTCAAGCGCGCGCGTCCGGCCGAACTGCTGCCGGGCACGCTGCGGGTGATCAGCGCG
CGCATGGATTATCTGCCCGATGCGGCCGACGCCCGCGCCGCGCTGGATGATCCGGCCCGCGCCTATGTGTCGCGCTATGC
GCTCGGGCGCGACTACCACAAGGTATTGCGCAAGCGCCTGCAGCAGCTGGCCGACCGTATCGCGGCGGAAGTGCCGCACG
GCTATCGCGTGTTCGTGGATTCCGCGCCGGTGCTGGAGGTGGAGCTGGCAAGCCGCAGCGGCGCCGGCTGGCGCGGCAAG
CACACGCTGCTGCTCGACCGCACCGGCTCGTGGTTCTTCCTGGGCGAATTGTTCACCGACCTGCCGCTGCCGGTGGATGC
CCCGGTGCAGCCCCACTGCGGCAGTTGCAGCGCCTGCATCGGCGCCTGTCCCACCGGCGCCATCGTTGCGCCCTACCAGG
TGGACGCGCGGCGCTGCATTTCCTACCTGACGATCGAGTTGCAGGGCGCGATCCCGGAGGCGCTGCGCCCCTTGCTCGGC
AATCGCATCTACGGCTGCGACGACTGCCAGCTTGCCTGTCCGTGGAACCGCTTCGCGCAGCTCAGCGCCGAGCCGGATTT
CGCGCCGCGCCACCGGCTGGACGAGGCGACGCTGTGCGAGCTGTTCGCTTGGTCCGCGGAGGATTTCGCTACCCGCACGG
CCGGCAGCGCGATCCACCGCATCGGCCACGAGCGCTGGCTGCGCAACATCGCGGTGGCGCTGGGCAATGCGCCCGCGACG
CCGGAAGTGATCGCCGCGCTGCGCAGCCGCGCCGACGACGAGTCCGCGCTGGTGCGCGAGCACGTGGCCTGGGCGCTGGC
GCAACACGGGGTTGGCTGA

Upstream 100 bases:

>100_bases
GTGCGGCGCCGAGCGCCAGCGTGTCCGCTTCGGCGGGCAAGTCCAGCTGCGCCTCGCTATCATGGGCGGCGTGAACGATG
CTGATCATGGAAACCTCTCG

Downstream 100 bases:

>100_bases
GCCGCGCTGCACCCGTCCGCGCGGCTGGCGTCCGCAAGTGCGATGACCGGCCGGACCGCGCGCGGGGCGTCCTGCCTCGC
TTCGCGTCAGCTCGCCAGCG

Product: electron transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MTGADAEHLAGLVQRIREWGKALGFSAVTIGGVDLADAEPGLMDWLAAGFHGEMDYMARHGLKRARPAELLPGTLRVISA
RMDYLPDAADARAALDDPARAYVSRYALGRDYHKVLRKRLQQLADRIAAEVPHGYRVFVDSAPVLEVELASRSGAGWRGK
HTLLLDRTGSWFFLGELFTDLPLPVDAPVQPHCGSCSACIGACPTGAIVAPYQVDARRCISYLTIELQGAIPEALRPLLG
NRIYGCDDCQLACPWNRFAQLSAEPDFAPRHRLDEATLCELFAWSAEDFATRTAGSAIHRIGHERWLRNIAVALGNAPAT
PEVIAALRSRADDESALVREHVAWALAQHGVG

Sequences:

>Translated_352_residues
MTGADAEHLAGLVQRIREWGKALGFSAVTIGGVDLADAEPGLMDWLAAGFHGEMDYMARHGLKRARPAELLPGTLRVISA
RMDYLPDAADARAALDDPARAYVSRYALGRDYHKVLRKRLQQLADRIAAEVPHGYRVFVDSAPVLEVELASRSGAGWRGK
HTLLLDRTGSWFFLGELFTDLPLPVDAPVQPHCGSCSACIGACPTGAIVAPYQVDARRCISYLTIELQGAIPEALRPLLG
NRIYGCDDCQLACPWNRFAQLSAEPDFAPRHRLDEATLCELFAWSAEDFATRTAGSAIHRIGHERWLRNIAVALGNAPAT
PEVIAALRSRADDESALVREHVAWALAQHGVG
>Mature_351_residues
TGADAEHLAGLVQRIREWGKALGFSAVTIGGVDLADAEPGLMDWLAAGFHGEMDYMARHGLKRARPAELLPGTLRVISAR
MDYLPDAADARAALDDPARAYVSRYALGRDYHKVLRKRLQQLADRIAAEVPHGYRVFVDSAPVLEVELASRSGAGWRGKH
TLLLDRTGSWFFLGELFTDLPLPVDAPVQPHCGSCSACIGACPTGAIVAPYQVDARRCISYLTIELQGAIPEALRPLLGN
RIYGCDDCQLACPWNRFAQLSAEPDFAPRHRLDEATLCELFAWSAEDFATRTAGSAIHRIGHERWLRNIAVALGNAPATP
EVIAALRSRADDESALVREHVAWALAQHGVG

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=343, Percent_Identity=62.3906705539359, Blast_Score=437, Evalue=1e-124,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013542
- InterPro:   IPR009051 [H]

Pfam domain/function: PF08331 DUF1730 [H]

EC number: NA

Molecular weight: Translated: 38332; Mature: 38201

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGADAEHLAGLVQRIREWGKALGFSAVTIGGVDLADAEPGLMDWLAAGFHGEMDYMARH
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCEECCCCCCCHHHHHHHCCCCCHHHHHHC
GLKRARPAELLPGTLRVISARMDYLPDAADARAALDDPARAYVSRYALGRDYHKVLRKRL
CCCCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHH
QQLADRIAAEVPHGYRVFVDSAPVLEVELASRSGAGWRGKHTLLLDRTGSWFFLGELFTD
HHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEHHHHHHC
LPLPVDAPVQPHCGSCSACIGACPTGAIVAPYQVDARRCISYLTIELQGAIPEALRPLLG
CCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCHHHHHHHHHHHHEEECCCCHHHHHHHHC
NRIYGCDDCQLACPWNRFAQLSAEPDFAPRHRLDEATLCELFAWSAEDFATRTAGSAIHR
CCCCCCCCCEEECCHHHHHHCCCCCCCCCHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
IGHERWLRNIAVALGNAPATPEVIAALRSRADDESALVREHVAWALAQHGVG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TGADAEHLAGLVQRIREWGKALGFSAVTIGGVDLADAEPGLMDWLAAGFHGEMDYMARH
CCCCHHHHHHHHHHHHHHHHHHCCCEEEECCEECCCCCCCHHHHHHHCCCCCHHHHHHC
GLKRARPAELLPGTLRVISARMDYLPDAADARAALDDPARAYVSRYALGRDYHKVLRKRL
CCCCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHH
QQLADRIAAEVPHGYRVFVDSAPVLEVELASRSGAGWRGKHTLLLDRTGSWFFLGELFTD
HHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEHHHHHHC
LPLPVDAPVQPHCGSCSACIGACPTGAIVAPYQVDARRCISYLTIELQGAIPEALRPLLG
CCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCHHHHHHHHHHHHEEECCCCHHHHHHHHC
NRIYGCDDCQLACPWNRFAQLSAEPDFAPRHRLDEATLCELFAWSAEDFATRTAGSAIHR
CCCCCCCCCEEECCHHHHHHCCCCCCCCCHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
IGHERWLRNIAVALGNAPATPEVIAALRSRADDESALVREHVAWALAQHGVG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]