Definition Azoarcus sp. BH72 chromosome, complete genome.
Accession NC_008702
Length 4,376,040

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The map label for this gene is yjcG [C]

Identifier: 119897440

GI number: 119897440

Start: 1236315

End: 1238120

Strand: Direct

Name: yjcG [C]

Synonym: azo1149

Alternate gene names: 119897440

Gene position: 1236315-1238120 (Clockwise)

Preceding gene: 119897439

Following gene: 119897441

Centisome position: 28.25

GC content: 64.51

Gene sequence:

>1806_bases
ATGGATCTGCAAACCATTACCTATCTTGTGGTCGGTGCCAGCTTCGCGCTGTATATCGGCATCGCCATCTGGGCCCGTGC
GGGTAGCACGAGCGAGTTCTACGTTGCCGGCGGCGGCGTGCATCCGGTTACCAACGGCATGGCGACGGCGGCCGACTGGA
TGTCCGCCGCGTCCTTCATCTCCATGGCCGGCCTGATCGCCAACATGGGCTACGGTGGCGGCCTGTTCCTGATGGGCTGG
ACCGGCGGCTACGTGTTGCTGGCGATGCTGCTGGCGCCGTACCTGCGCAAGTTCGGCAAGTTCACCGTGCCCCAGTTCAT
CGGCGACCGCTTCTACTCGAAGTCGGCCAGCACGGTGGCGGTGGTGTGCCTGCTGACCGCGTCGATCACCTACGTCATCG
GCCAGATGACCGGGGTCGGCGTGGCGTTCTCGCGCTTCCTCGGCGTCAGCAACGACATGGGCATCTACATCGGCATGGGC
ATCGTGTTCATGTACGCGGTGTTCGGCGGCATGAAGGGCATCACCTACACCCAGGTGGCGCAGTACATCGTGCTGATCCT
CGCCTACACCATCCCGGCGATCTTCATTGCCCTGCAGCTGACCGGCAACCCGATTCCGCAGCTCGGCCTGGGCAGCGACC
TCTCGGGCACCGACGTTTCGCTGCTGCAGCGTCTCAACCAGGTCGTCACCGACCTCGGCTTCGGCGAATACACCACCTCG
GTGCCGGGCAGCACGCTCAACATGTTCGTCTACACCGTGTCGCTGATGATCGGTACGGCGGGCCTGCCGCACGTGATCGT
GCGCTTCTTCACCGTGCCGAAGGTGAAGGACGCGCGCAGCTCCGCGGGCTGGGCGCTGGTCTTCATCGCCATCCTGTACA
CCACCGCGCCGGCCGTTGCGGCGATGGCCAAGTACAACCTGCACGCCACGGTGAACTCCGCGGTGACGACGGGCGGCGAT
CTGTACGCCACCGAGGCCAGCATCAAGGCAGAGGAGCGTCCGGACTGGATGAAGCGCTGGGAAAAGACCGGTCTGCTGAA
GTTCGAGGACAAGAACGGCGACGGCCGCATCCAGTACTACAACGACGCCACCAAGAACGCCGATGCCAAGGCCAAGGCCG
AAGCCGCCGGCTGGAAGGGCAACGAGCTGTCGGTCAACGCCGACATCATCGTGCTGGCCAACCCGGAAATCGCGCTGCTG
CCCAACTGGGTGATCGCGCTGATCGCCGCGGGTGGTCTGGCTGCCGCGCTGTCCACCGCCGCCGGCCTGCTGATGGCGAT
CTCGTCCGCGGTGTCGCACGACCTGGTGAAGAACGTCTTCATGCCGGGCATCTCGGAGAAGGGCGAACTGATGGCGGGCA
AGCTGTCGATGGCGGTGGCGATCGTGATCGCCGGCTATCTCGGCCTTAACCCCCCGGGCTTCGCTGCAGGCACCGTGGCG
CTCGCGTTCGGTATTGCCGCCTCGTCGCTGTTCCCGGCGATCATGATGGGCATCTTCTCCAAGAAGATGAACAAGGAAGG
CGCCATCGCCGGCATGCTGGCAGGCCTGTTCGTCACCTGCTTCTACGTGTTCGCGCACAAGGGCCTGTTCTTCATCAAGG
GCACCGAGTTCGTCGACATGATCGGCGGTCCGAACGCCTTCTTCGGCATCACCCCTGAAGCCTTCGGCGCGATCGGCGCG
CTGGTCAACTTCGGCGTCGCCTTCGCGGTCGACAAGGTGACGAAGGAACCGCCGGAGCACATCCAGCATCTGGTGGAAAG
CGTGCGCATCCCGCGTGGTGCGAAGGCTGTCGACGGCGCTCACTGA

Upstream 100 bases:

>100_bases
ATCAATCTACGTCTTCGTCATTCTCATCTTCTACTACGCGAAGAAGATGGCGCAGATCGACGAACGGTTCGACGTACACG
AAGACTGAGGAGCCCGACAC

Downstream 100 bases:

>100_bases
GCGTTGCCAGTCCTGCCGTCCGTGCCGCGCGCAGCGGCGCGGACGCAGCCCCCGCCCCCGGCGGGGTTTTCATTTCAGGT
CCGGGGCACTGCGGCAGTGC

Product: putative sodium:solute symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 601; Mature: 601

Protein sequence:

>601_residues
MDLQTITYLVVGASFALYIGIAIWARAGSTSEFYVAGGGVHPVTNGMATAADWMSAASFISMAGLIANMGYGGGLFLMGW
TGGYVLLAMLLAPYLRKFGKFTVPQFIGDRFYSKSASTVAVVCLLTASITYVIGQMTGVGVAFSRFLGVSNDMGIYIGMG
IVFMYAVFGGMKGITYTQVAQYIVLILAYTIPAIFIALQLTGNPIPQLGLGSDLSGTDVSLLQRLNQVVTDLGFGEYTTS
VPGSTLNMFVYTVSLMIGTAGLPHVIVRFFTVPKVKDARSSAGWALVFIAILYTTAPAVAAMAKYNLHATVNSAVTTGGD
LYATEASIKAEERPDWMKRWEKTGLLKFEDKNGDGRIQYYNDATKNADAKAKAEAAGWKGNELSVNADIIVLANPEIALL
PNWVIALIAAGGLAAALSTAAGLLMAISSAVSHDLVKNVFMPGISEKGELMAGKLSMAVAIVIAGYLGLNPPGFAAGTVA
LAFGIAASSLFPAIMMGIFSKKMNKEGAIAGMLAGLFVTCFYVFAHKGLFFIKGTEFVDMIGGPNAFFGITPEAFGAIGA
LVNFGVAFAVDKVTKEPPEHIQHLVESVRIPRGAKAVDGAH

Sequences:

>Translated_601_residues
MDLQTITYLVVGASFALYIGIAIWARAGSTSEFYVAGGGVHPVTNGMATAADWMSAASFISMAGLIANMGYGGGLFLMGW
TGGYVLLAMLLAPYLRKFGKFTVPQFIGDRFYSKSASTVAVVCLLTASITYVIGQMTGVGVAFSRFLGVSNDMGIYIGMG
IVFMYAVFGGMKGITYTQVAQYIVLILAYTIPAIFIALQLTGNPIPQLGLGSDLSGTDVSLLQRLNQVVTDLGFGEYTTS
VPGSTLNMFVYTVSLMIGTAGLPHVIVRFFTVPKVKDARSSAGWALVFIAILYTTAPAVAAMAKYNLHATVNSAVTTGGD
LYATEASIKAEERPDWMKRWEKTGLLKFEDKNGDGRIQYYNDATKNADAKAKAEAAGWKGNELSVNADIIVLANPEIALL
PNWVIALIAAGGLAAALSTAAGLLMAISSAVSHDLVKNVFMPGISEKGELMAGKLSMAVAIVIAGYLGLNPPGFAAGTVA
LAFGIAASSLFPAIMMGIFSKKMNKEGAIAGMLAGLFVTCFYVFAHKGLFFIKGTEFVDMIGGPNAFFGITPEAFGAIGA
LVNFGVAFAVDKVTKEPPEHIQHLVESVRIPRGAKAVDGAH
>Mature_601_residues
MDLQTITYLVVGASFALYIGIAIWARAGSTSEFYVAGGGVHPVTNGMATAADWMSAASFISMAGLIANMGYGGGLFLMGW
TGGYVLLAMLLAPYLRKFGKFTVPQFIGDRFYSKSASTVAVVCLLTASITYVIGQMTGVGVAFSRFLGVSNDMGIYIGMG
IVFMYAVFGGMKGITYTQVAQYIVLILAYTIPAIFIALQLTGNPIPQLGLGSDLSGTDVSLLQRLNQVVTDLGFGEYTTS
VPGSTLNMFVYTVSLMIGTAGLPHVIVRFFTVPKVKDARSSAGWALVFIAILYTTAPAVAAMAKYNLHATVNSAVTTGGD
LYATEASIKAEERPDWMKRWEKTGLLKFEDKNGDGRIQYYNDATKNADAKAKAEAAGWKGNELSVNADIIVLANPEIALL
PNWVIALIAAGGLAAALSTAAGLLMAISSAVSHDLVKNVFMPGISEKGELMAGKLSMAVAIVIAGYLGLNPPGFAAGTVA
LAFGIAASSLFPAIMMGIFSKKMNKEGAIAGMLAGLFVTCFYVFAHKGLFFIKGTEFVDMIGGPNAFFGITPEAFGAIGA
LVNFGVAFAVDKVTKEPPEHIQHLVESVRIPRGAKAVDGAH

Specific function: Unknown

COG id: COG4147

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI1790503, Length=297, Percent_Identity=29.2929292929293, Blast_Score=119, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR019899 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 63216; Mature: 63216

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLQTITYLVVGASFALYIGIAIWARAGSTSEFYVAGGGVHPVTNGMATAADWMSAASFI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
SMAGLIANMGYGGGLFLMGWTGGYVLLAMLLAPYLRKFGKFTVPQFIGDRFYSKSASTVA
HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
VVCLLTASITYVIGQMTGVGVAFSRFLGVSNDMGIYIGMGIVFMYAVFGGMKGITYTQVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
QYIVLILAYTIPAIFIALQLTGNPIPQLGLGSDLSGTDVSLLQRLNQVVTDLGFGEYTTS
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
VPGSTLNMFVYTVSLMIGTAGLPHVIVRFFTVPKVKDARSSAGWALVFIAILYTTAPAVA
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AMAKYNLHATVNSAVTTGGDLYATEASIKAEERPDWMKRWEKTGLLKFEDKNGDGRIQYY
HHHHHCEEEEECCHHCCCCCEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCEEEE
NDATKNADAKAKAEAAGWKGNELSVNADIIVLANPEIALLPNWVIALIAAGGLAAALSTA
CCCCCCCCCHHHHHHCCCCCCEEEECCEEEEEECCCEEECHHHHHHHHHHCHHHHHHHHH
AGLLMAISSAVSHDLVKNVFMPGISEKGELMAGKLSMAVAIVIAGYLGLNPPGFAAGTVA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LAFGIAASSLFPAIMMGIFSKKMNKEGAIAGMLAGLFVTCFYVFAHKGLFFIKGTEFVDM
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHH
IGGPNAFFGITPEAFGAIGALVNFGVAFAVDKVTKEPPEHIQHLVESVRIPRGAKAVDGA
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
H
C
>Mature Secondary Structure
MDLQTITYLVVGASFALYIGIAIWARAGSTSEFYVAGGGVHPVTNGMATAADWMSAASFI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
SMAGLIANMGYGGGLFLMGWTGGYVLLAMLLAPYLRKFGKFTVPQFIGDRFYSKSASTVA
HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
VVCLLTASITYVIGQMTGVGVAFSRFLGVSNDMGIYIGMGIVFMYAVFGGMKGITYTQVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
QYIVLILAYTIPAIFIALQLTGNPIPQLGLGSDLSGTDVSLLQRLNQVVTDLGFGEYTTS
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
VPGSTLNMFVYTVSLMIGTAGLPHVIVRFFTVPKVKDARSSAGWALVFIAILYTTAPAVA
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AMAKYNLHATVNSAVTTGGDLYATEASIKAEERPDWMKRWEKTGLLKFEDKNGDGRIQYY
HHHHHCEEEEECCHHCCCCCEEEECCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCEEEE
NDATKNADAKAKAEAAGWKGNELSVNADIIVLANPEIALLPNWVIALIAAGGLAAALSTA
CCCCCCCCCHHHHHHCCCCCCEEEECCEEEEEECCCEEECHHHHHHHHHHCHHHHHHHHH
AGLLMAISSAVSHDLVKNVFMPGISEKGELMAGKLSMAVAIVIAGYLGLNPPGFAAGTVA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LAFGIAASSLFPAIMMGIFSKKMNKEGAIAGMLAGLFVTCFYVFAHKGLFFIKGTEFVDM
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHH
IGGPNAFFGITPEAFGAIGALVNFGVAFAVDKVTKEPPEHIQHLVESVRIPRGAKAVDGA
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1356967 [H]