Click here to switch to the map view.

The map label for this gene is motC [H]

Identifier: 119897399

GI number: 119897399

Start: 1193004

End: 1193744

Strand: Direct

Name: motC [H]

Synonym: azo1108

Alternate gene names: 119897399

Gene position: 1193004-1193744 (Clockwise)

Preceding gene: 119897398

Following gene: 119897401

Centisome position: 27.26

GC content: 66.53

Gene sequence:

>741_bases
ATGGACAGCATCAGCCTCGTCGGACTCACCCTCGGTGTCGCCGCGATCCTCATCGGCCAGGCGATGGAGGGCGGCCATAT
CGCCTCGCTGCTGCAGCCGACCGCCTTCCTGATCGTCATCGGCGGCACCCTCGGCGCGGTGATGCTGCAAAGCCCGCTGC
GCGTCTTCAAGGAGGGCATGCGGATGGCGAAGTGGGTGTTCATCACCCCGGCGACGAGCCACGCGCAGTTGATCCAGCAG
GTCACAAACTGGAGCCATGTCGCGCGCAAGGAGGGTCTGCTCGCGCTCGAAGCGCAGATCCCGCGCCTGCCCGACCCCTT
CATGCGCAAGGGCTTGCAGATGCTGGTCGATGGCGTGGAGCCGGGCCGCCTGCGTGAGGTGCTGGAGGTCGAAATCGGCG
CGTGGGAGGCGCAGTTGCGCCAGTGTGCGCGAATCTGGGAAAGCGCCGGCGGCTACGCGCCGACGGTCGGCATCCTGGGC
GCGGTGATGGGCCTCATCCATGTGATGGAGAACCTCTCCGACCCCGCCAAGCTCGGCTCCGGCATCGCGGTCGCCTTTGT
CGCCACCATCTACGGCGTCGGTTCCGCCAACCTCATCTTCCTGCCGATCGCCAAGAAGCTGCTCGCCCACATCGGCACGC
TGGTGGCGCAGCGCGAAATGTTCGTCGACGGCCTCGTCGGCATCGCCAATGGAGACAACCCCCGCATCATCGAAAGCCGC
ATGCAGGGCTACGTGGTCTGA

Upstream 100 bases:

>100_bases
GGCCGCCCGCCCAAACGGCCGCCGGAGGCCTGAGCCCTTCCACGCCCTGCCGCCCGGCGGTCCGGTCTCTCCGGCCGGGC
ACCAACCGGACTGAACCCGC

Downstream 100 bases:

>100_bases
CGCGCCACCTTCGCCCCCTGGGGGCCGCCCCGCGGCAGCAGGGCGGTGCCTTGCACCTATAGCCGGAAGCTGTCGATCGA
CCCTTTCAGCTCGTCGGCCA

Product: flagellar motor protein

Products: NA

Alternate protein names: Chemotaxis protein MotA [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MDSISLVGLTLGVAAILIGQAMEGGHIASLLQPTAFLIVIGGTLGAVMLQSPLRVFKEGMRMAKWVFITPATSHAQLIQQ
VTNWSHVARKEGLLALEAQIPRLPDPFMRKGLQMLVDGVEPGRLREVLEVEIGAWEAQLRQCARIWESAGGYAPTVGILG
AVMGLIHVMENLSDPAKLGSGIAVAFVATIYGVGSANLIFLPIAKKLLAHIGTLVAQREMFVDGLVGIANGDNPRIIESR
MQGYVV

Sequences:

>Translated_246_residues
MDSISLVGLTLGVAAILIGQAMEGGHIASLLQPTAFLIVIGGTLGAVMLQSPLRVFKEGMRMAKWVFITPATSHAQLIQQ
VTNWSHVARKEGLLALEAQIPRLPDPFMRKGLQMLVDGVEPGRLREVLEVEIGAWEAQLRQCARIWESAGGYAPTVGILG
AVMGLIHVMENLSDPAKLGSGIAVAFVATIYGVGSANLIFLPIAKKLLAHIGTLVAQREMFVDGLVGIANGDNPRIIESR
MQGYVV
>Mature_246_residues
MDSISLVGLTLGVAAILIGQAMEGGHIASLLQPTAFLIVIGGTLGAVMLQSPLRVFKEGMRMAKWVFITPATSHAQLIQQ
VTNWSHVARKEGLLALEAQIPRLPDPFMRKGLQMLVDGVEPGRLREVLEVEIGAWEAQLRQCARIWESAGGYAPTVGILG
AVMGLIHVMENLSDPAKLGSGIAVAFVATIYGVGSANLIFLPIAKKLLAHIGTLVAQREMFVDGLVGIANGDNPRIIESR
MQGYVV

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell inner membrane; Multi- pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 26268; Mature: 26268

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSISLVGLTLGVAAILIGQAMEGGHIASLLQPTAFLIVIGGTLGAVMLQSPLRVFKEGM
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHEEEEECCHHHHHHHHHHHHHHHHHH
RMAKWVFITPATSHAQLIQQVTNWSHVARKEGLLALEAQIPRLPDPFMRKGLQMLVDGVE
HHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCC
PGRLREVLEVEIGAWEAQLRQCARIWESAGGYAPTVGILGAVMGLIHVMENLSDPAKLGS
CHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCC
GIAVAFVATIYGVGSANLIFLPIAKKLLAHIGTLVAQREMFVDGLVGIANGDNPRIIESR
CHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
MQGYVV
HCCCCC
>Mature Secondary Structure
MDSISLVGLTLGVAAILIGQAMEGGHIASLLQPTAFLIVIGGTLGAVMLQSPLRVFKEGM
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHEEEEECCHHHHHHHHHHHHHHHHHH
RMAKWVFITPATSHAQLIQQVTNWSHVARKEGLLALEAQIPRLPDPFMRKGLQMLVDGVE
HHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCC
PGRLREVLEVEIGAWEAQLRQCARIWESAGGYAPTVGILGAVMGLIHVMENLSDPAKLGS
CHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCC
GIAVAFVATIYGVGSANLIFLPIAKKLLAHIGTLVAQREMFVDGLVGIANGDNPRIIESR
CHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
MQGYVV
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]