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The map label for this gene is flhF [H]

Identifier: 119897396

GI number: 119897396

Start: 1189724

End: 1191256

Strand: Direct

Name: flhF [H]

Synonym: azo1105

Alternate gene names: 119897396

Gene position: 1189724-1191256 (Clockwise)

Preceding gene: 119897395

Following gene: 119897397

Centisome position: 27.19

GC content: 73.65

Gene sequence:

>1533_bases
ATGAACGTCAAGCGCTACTTTGCCCCCACCGCCCGCGAAGCCCTGCGTGCGTTGAAGGAGGAACTCGGAGCCGATGCCAT
CGTGCTGTCCAATCGGGCGGTCGAGGGCGGCGTCGAGATCCTGGCGCTTCCGGCCGATGCGGTCGGTGCCTTGCACAATG
CCGCCCGCAGCGCGCGTCCCGCGCCCGCTGCGCCGCGCCAGCCGGCCTACCCGCCGGCCGCGCCGACCGGCTACCCGCAG
GCGGCGGCCCGTCGCGACGAGCCGGTCGAACCCCGCGCGCCGGCGCGTCCCGCGCCGCGCTTCGACGACGACGATTTCCA
CGTCAGCCTGTCCGCCCTCGCGGCCGGCGCCGTTCCGCGCAATGCGGCCGCGCCCGCGGTGCGCCAGCCGGGCGACAAGG
TCATCCGCCCGTTCAATCCGCCGCGCATCGAAACCGCGGACTACATGCTGCGCGAGGAAAAGCCGCAGCCCCGCAGCGCC
CCGGCGCCGCGCCGCGCGGTGGAAGAACCGGCGGCTACCGCCCCCGCTGCCGCGGCCGCAGCGCCCATGGTGGCGCCCGA
AGCGGCCGTGCGCGACGACGGCCGCGTGCGCGAACTGCAGGAAACCAACGCCCGCCTGATGGCGGAACTCAGCGGCATCC
GCGGCATGATCGAACGCCAGCTCGCCGGTTTTGCGTGGGGCGAAACCCGCCGCCAGGCGCCGGCCCGCGCCGCGATGGTG
GGCGAACTGCTCGAAGCCGGCTTCTCCGCGCCGAGTGCGCGCAAGCTGGCCGAAGCCGTGGGCGAGGACGACAGCCCGCA
GGCGGCCCGTGCCGCGGTGCGCGCCGAACTCGACCGCGCGCTGCGCGCCCGCGCTTCCGACGATGACCTGATCGACCGCG
GCGGCGTGTTCGCGCTGGTCGGCCCCACCGGGGTCGGCAAGACCACCACCACCGCCAAGCTCGCCGCGCGTTGCGTGGTG
CGCCACGGCGCCAGCAAGCTCGCGCTGATCACCACCGACGGTTACCGCATCGGCGCGCAGGAGCAGTTGCGCATCTACGG
CCGCATCCTCGGCGTGCCGGTGTTCTCGGTGCGCGACGCCGCCGACCTGCGCCAGACCCTGGCCGAACTGCGCAACAAGC
ACATGGTGCTGATCGACACCATGGGCGTCAGCCAGCGTGACCGCATGGTGGCCGAGCAGGCCGCGATGCTCACCGGCGCC
GGCGAAGTGCGCCGCCTGCTGCTGCTCAACGCCACCTGCCGTGGCGACACGCTCGACGACGTGGTGCGCGCCTACGCCGG
GCCTGACCTCGCCGGGGTGATCTTCTCCAAGGTGGACGAGGCGGCCTCGCTCGCGCCGGCGATCGACGTCGCGGTGCGCC
GCAAGCTCGACCTGCTCTACGTCACCAACGGCCAGCGCGTGCCGGAAGACCTGCACCTGCCCAACCGCGCCTACCTGCTG
CACCGCGCGCTGCGCGAGCAGTCGGCCGAATCGCCGTGGCGCATGAATGGCGACGAAGCCGGCCTGATGCTCGCCGCCGG
TTCGGGAGCCTGA

Upstream 100 bases:

>100_bases
AGCGGGGGAAAGCCGGTTTATTCGCCCCATGGCGGGTAGGGCCGGCTGGCGATAATCCTGACAAAGCTGCGCGTATAGCG
CGGTAGTCCGGAGAATCGAC

Downstream 100 bases:

>100_bases
TCATGATTCCCGCCCGCGAAGACCAGGCGGCCGGGCTGCGCCGGCTGTTCCGCCGCGCCCCGCCCACCGTGGTGGCGCTG
TATGCCGCCGGCCGTCAGCG

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MNVKRYFAPTAREALRALKEELGADAIVLSNRAVEGGVEILALPADAVGALHNAARSARPAPAAPRQPAYPPAAPTGYPQ
AAARRDEPVEPRAPARPAPRFDDDDFHVSLSALAAGAVPRNAAAPAVRQPGDKVIRPFNPPRIETADYMLREEKPQPRSA
PAPRRAVEEPAATAPAAAAAAPMVAPEAAVRDDGRVRELQETNARLMAELSGIRGMIERQLAGFAWGETRRQAPARAAMV
GELLEAGFSAPSARKLAEAVGEDDSPQAARAAVRAELDRALRARASDDDLIDRGGVFALVGPTGVGKTTTTAKLAARCVV
RHGASKLALITTDGYRIGAQEQLRIYGRILGVPVFSVRDAADLRQTLAELRNKHMVLIDTMGVSQRDRMVAEQAAMLTGA
GEVRRLLLLNATCRGDTLDDVVRAYAGPDLAGVIFSKVDEAASLAPAIDVAVRRKLDLLYVTNGQRVPEDLHLPNRAYLL
HRALREQSAESPWRMNGDEAGLMLAAGSGA

Sequences:

>Translated_510_residues
MNVKRYFAPTAREALRALKEELGADAIVLSNRAVEGGVEILALPADAVGALHNAARSARPAPAAPRQPAYPPAAPTGYPQ
AAARRDEPVEPRAPARPAPRFDDDDFHVSLSALAAGAVPRNAAAPAVRQPGDKVIRPFNPPRIETADYMLREEKPQPRSA
PAPRRAVEEPAATAPAAAAAAPMVAPEAAVRDDGRVRELQETNARLMAELSGIRGMIERQLAGFAWGETRRQAPARAAMV
GELLEAGFSAPSARKLAEAVGEDDSPQAARAAVRAELDRALRARASDDDLIDRGGVFALVGPTGVGKTTTTAKLAARCVV
RHGASKLALITTDGYRIGAQEQLRIYGRILGVPVFSVRDAADLRQTLAELRNKHMVLIDTMGVSQRDRMVAEQAAMLTGA
GEVRRLLLLNATCRGDTLDDVVRAYAGPDLAGVIFSKVDEAASLAPAIDVAVRRKLDLLYVTNGQRVPEDLHLPNRAYLL
HRALREQSAESPWRMNGDEAGLMLAAGSGA
>Mature_510_residues
MNVKRYFAPTAREALRALKEELGADAIVLSNRAVEGGVEILALPADAVGALHNAARSARPAPAAPRQPAYPPAAPTGYPQ
AAARRDEPVEPRAPARPAPRFDDDDFHVSLSALAAGAVPRNAAAPAVRQPGDKVIRPFNPPRIETADYMLREEKPQPRSA
PAPRRAVEEPAATAPAAAAAAPMVAPEAAVRDDGRVRELQETNARLMAELSGIRGMIERQLAGFAWGETRRQAPARAAMV
GELLEAGFSAPSARKLAEAVGEDDSPQAARAAVRAELDRALRARASDDDLIDRGGVFALVGPTGVGKTTTTAKLAARCVV
RHGASKLALITTDGYRIGAQEQLRIYGRILGVPVFSVRDAADLRQTLAELRNKHMVLIDTMGVSQRDRMVAEQAAMLTGA
GEVRRLLLLNATCRGDTLDDVVRAYAGPDLAGVIFSKVDEAASLAPAIDVAVRRKLDLLYVTNGQRVPEDLHLPNRAYLL
HRALREQSAESPWRMNGDEAGLMLAAGSGA

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 54284; Mature: 54284

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKRYFAPTAREALRALKEELGADAIVLSNRAVEGGVEILALPADAVGALHNAARSARP
CCCHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHCCCC
APAAPRQPAYPPAAPTGYPQAAARRDEPVEPRAPARPAPRFDDDDFHVSLSALAAGAVPR
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCC
NAAAPAVRQPGDKVIRPFNPPRIETADYMLREEKPQPRSAPAPRRAVEEPAATAPAAAAA
CCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHH
APMVAPEAAVRDDGRVRELQETNARLMAELSGIRGMIERQLAGFAWGETRRQAPARAAMV
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHH
GELLEAGFSAPSARKLAEAVGEDDSPQAARAAVRAELDRALRARASDDDLIDRGGVFALV
HHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEE
GPTGVGKTTTTAKLAARCVVRHGASKLALITTDGYRIGAQEQLRIYGRILGVPVFSVRDA
CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEECCHHHHHHHHHHHCCCHHHHCCH
ADLRQTLAELRNKHMVLIDTMGVSQRDRMVAEQAAMLTGAGEVRRLLLLNATCRGDTLDD
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHEECCCCCCCHHH
VVRAYAGPDLAGVIFSKVDEAASLAPAIDVAVRRKLDLLYVTNGQRVPEDLHLPNRAYLL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHCCCCHHHHH
HRALREQSAESPWRMNGDEAGLMLAAGSGA
HHHHHHHCCCCCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MNVKRYFAPTAREALRALKEELGADAIVLSNRAVEGGVEILALPADAVGALHNAARSARP
CCCHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHCCCC
APAAPRQPAYPPAAPTGYPQAAARRDEPVEPRAPARPAPRFDDDDFHVSLSALAAGAVPR
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCC
NAAAPAVRQPGDKVIRPFNPPRIETADYMLREEKPQPRSAPAPRRAVEEPAATAPAAAAA
CCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHH
APMVAPEAAVRDDGRVRELQETNARLMAELSGIRGMIERQLAGFAWGETRRQAPARAAMV
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHH
GELLEAGFSAPSARKLAEAVGEDDSPQAARAAVRAELDRALRARASDDDLIDRGGVFALV
HHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEE
GPTGVGKTTTTAKLAARCVVRHGASKLALITTDGYRIGAQEQLRIYGRILGVPVFSVRDA
CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEECCHHHHHHHHHHHCCCHHHHCCH
ADLRQTLAELRNKHMVLIDTMGVSQRDRMVAEQAAMLTGAGEVRRLLLLNATCRGDTLDD
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHEECCCCCCCHHH
VVRAYAGPDLAGVIFSKVDEAASLAPAIDVAVRRKLDLLYVTNGQRVPEDLHLPNRAYLL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHCCCCHHHHH
HRALREQSAESPWRMNGDEAGLMLAAGSGA
HHHHHHHCCCCCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9503621 [H]