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The map label for this gene is infC [H]

Identifier: 119897371

GI number: 119897371

Start: 1164657

End: 1165127

Strand: Direct

Name: infC [H]

Synonym: azo1080

Alternate gene names: 119897371

Gene position: 1164657-1165127 (Clockwise)

Preceding gene: 119897370

Following gene: 119897372

Centisome position: 26.61

GC content: 59.66

Gene sequence:

>471_bases
GTGCGTCTGGTCGGTGAAGATGGCGAACAACTCGGCATCGTTTCCCTTAACGCCGCTCTGAACGCCGCCGAAGAGGCGGG
GCTTGATCTCGTCGAGATCGCACCGATGGCCAAGCCGCCGGTGTGCAAGATCATGGACTTCGGCAAGTTCAAGTATCAGG
AGCAGAAGAAGGCCCACGAAGCCAGGCTGAAGCAGAAGCAGGTGCAGGTGAAGGAGGTCAAGCTTCGCCCCGGTACCGAT
GAAAACGACTACCAGATCAAGCTGCGCAACCTCAAGCGCTTCCTTGAAGAGGGCGACAAGTGCAAGGTGACCTTGCGCTT
CCGCGGCCGGGAAATGGCGCACCAGGAGTTCGGCCTGCGCCAGTTGGAGCGGATCAAGGCCGACCTGGAGGAACTGGGTC
AGGTCGAGCAGATGCCCAAGATGGAAGGGCGTCAGATGATCATGGTGATCGCGCCCAAGAAGAACCGCTGA

Upstream 100 bases:

>100_bases
CGCGCTCCGGCCCGGTCTGATTTTGGTTTTCGTGGAGAACTGAACCATCGCTCAAGACAACAAGAAGCAGCGCGTCAATG
GGGAGATCAACGCAACGGAA

Downstream 100 bases:

>100_bases
CTCGAGCGGAACCGGATTTGCCCCGGCGGTCTGCGGGGCAAAACCGTGGCAACGATGAAGTTGCCGCGGATTACAAGTGG
TGTCAGGTGTAAAACGCGCT

Product: translation initiation factor IF-3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MRLVGEDGEQLGIVSLNAALNAAEEAGLDLVEIAPMAKPPVCKIMDFGKFKYQEQKKAHEARLKQKQVQVKEVKLRPGTD
ENDYQIKLRNLKRFLEEGDKCKVTLRFRGREMAHQEFGLRQLERIKADLEELGQVEQMPKMEGRQMIMVIAPKKNR

Sequences:

>Translated_156_residues
MRLVGEDGEQLGIVSLNAALNAAEEAGLDLVEIAPMAKPPVCKIMDFGKFKYQEQKKAHEARLKQKQVQVKEVKLRPGTD
ENDYQIKLRNLKRFLEEGDKCKVTLRFRGREMAHQEFGLRQLERIKADLEELGQVEQMPKMEGRQMIMVIAPKKNR
>Mature_156_residues
MRLVGEDGEQLGIVSLNAALNAAEEAGLDLVEIAPMAKPPVCKIMDFGKFKYQEQKKAHEARLKQKQVQVKEVKLRPGTD
ENDYQIKLRNLKRFLEEGDKCKVTLRFRGREMAHQEFGLRQLERIKADLEELGQVEQMPKMEGRQMIMVIAPKKNR

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=155, Percent_Identity=67.741935483871, Blast_Score=202, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019813
- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 17976; Mature: 17976

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00938 IF3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVGEDGEQLGIVSLNAALNAAEEAGLDLVEIAPMAKPPVCKIMDFGKFKYQEQKKAHE
CCCCCCCCCEEEEEEECHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHH
ARLKQKQVQVKEVKLRPGTDENDYQIKLRNLKRFLEEGDKCKVTLRFRGREMAHQEFGLR
HHHHHHHHHHHEEEECCCCCCCCCEEEHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHH
QLERIKADLEELGQVEQMPKMEGRQMIMVIAPKKNR
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MRLVGEDGEQLGIVSLNAALNAAEEAGLDLVEIAPMAKPPVCKIMDFGKFKYQEQKKAHE
CCCCCCCCCEEEEEEECHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHH
ARLKQKQVQVKEVKLRPGTDENDYQIKLRNLKRFLEEGDKCKVTLRFRGREMAHQEFGLR
HHHHHHHHHHHEEEECCCCCCCCCEEEHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHH
QLERIKADLEELGQVEQMPKMEGRQMIMVIAPKKNR
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA