| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is hemX [H]
Identifier: 119897286
GI number: 119897286
Start: 1069486
End: 1070682
Strand: Direct
Name: hemX [H]
Synonym: azo0995
Alternate gene names: 119897286
Gene position: 1069486-1070682 (Clockwise)
Preceding gene: 119897285
Following gene: 119897287
Centisome position: 24.44
GC content: 72.43
Gene sequence:
>1197_bases ATGAACGAAGAAACTCCCGCGCTCACCTCGTCCCCGGCCGCCGCGCAGCCGGCCGCCTCCGTAGAACCTCCCCCGTCGGA CCCGCGTCCGGCCGCCCCGTCCCGCTCATCGGGCGCCAGCGGCTGGGCGGTGCTCCTTGCCGTGCTCGCGCTTGGCGGCG CCGGGCTGGCCGGCTGGCAGGCGTGGGAGACCCGGGCGCGGGTCGGCGAACTGCGCCAGGAGCTGGCGAGCCGCCTCAAC GCGGGCGACACCGTGGCAGCCGAGGCACGCGCGCTTGCGCGCCAGCAGCAGGAGGCGATGGCCGCGCTGCAGGGCCGGGT CGGCGCGCTTGCGGCGCAGATCGAGGCGACCGAAGGGCAGGCCGCGGCCCTGGAGGCGCTCTATCAGGAGTTTTCCCGCT CGCGCGAAGATCGCGTGGTGGCGGAAGTGGAACAGGCGGTCAATGTGGCGGCCCAGCAGCTTCAGCTCGCCGGCAACATC GAGGCTGCACTGATCGCGCTGCAGGGCGCGGAGGCGCGGCTGGCGTTGCAGGACAAGGGCCAGCTGGCAGTGCTGCGGCG TGCGCTCGCCAAGGATATCGAGCAGCTCAAGCTGCAGCCCGAGGTGGATGTCGGCGGTATCGCACTGCGCCTCGAGCGTC TGCTGGAACGCGGCGATGCGCTGCCGCTCGCCTTCGAAAGCCAGCCGCCCGCCAATGCCGAGCACGGCGGGGAACAGGCG GCAGCGGTTGAACCCGGGCGCCTCAATGTGGCGCTGGCCTTCATCACCGAGCTGGGGCGCGACGTGTGGCGCGAACTGCG TTCGCTGGTCCGTGTCGAGCGGCTGGATCAGTCCGAACCGGTGCTGCTGGCCCCGGCGCAGAGCACTTTCCTGCGCGAAA ACCTCAAGATCCGCCTGCTCACGGCGCGGCTGGCCTTGCTCGCGCGCGACGGCCGCACCTATGCCGCCGACCTCGCCCAG GCGCGCAGCTGGATGGAGCGGTTCTTCGATACACGCGACGAACGTGTCCGCGAAGCGATCGGCGAACTCAAGGCGCTCGA GGCGATGTCGGTCGGCGACGAACGCCCGGCCCTGACCGAGAGCTTCGCCGCGCTGCGGGTGCTGCAGACCCGCGCCGGCG AACCCCGCACGCCCGCTGTTGCGGCAGAACCGGCCAGGCCGGCCAATGGTGGTCGCGCGCCGGCCCCGCAGCGCTGA
Upstream 100 bases:
>100_bases GCACGCCCGCGCCGCCGGCTTCGATCGCGTCGAGGAAACCCCGCCCGGCGATGACGGCCTGCTGGAGACGCTGGTCCGCC ACTTTGGTTAAACTCTCGGC
Downstream 100 bases:
>100_bases GGAACCGGCCCCATGCGCGCCCTGTTCTGGCTGATCGGCATCTTTGCCACCGCGGTGGGGCTGGCGATGCTTGCCCGCCT CAATGACGGCTACGTGCTGG
Product: uroporphyrin-III C-methyltransferase
Products: NA
Alternate protein names: Urogen-III methylase; ORF X [H]
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MNEETPALTSSPAAAQPAASVEPPPSDPRPAAPSRSSGASGWAVLLAVLALGGAGLAGWQAWETRARVGELRQELASRLN AGDTVAAEARALARQQQEAMAALQGRVGALAAQIEATEGQAAALEALYQEFSRSREDRVVAEVEQAVNVAAQQLQLAGNI EAALIALQGAEARLALQDKGQLAVLRRALAKDIEQLKLQPEVDVGGIALRLERLLERGDALPLAFESQPPANAEHGGEQA AAVEPGRLNVALAFITELGRDVWRELRSLVRVERLDQSEPVLLAPAQSTFLRENLKIRLLTARLALLARDGRTYAADLAQ ARSWMERFFDTRDERVREAIGELKALEAMSVGDERPALTESFAALRVLQTRAGEPRTPAVAAEPARPANGGRAPAPQR
Sequences:
>Translated_398_residues MNEETPALTSSPAAAQPAASVEPPPSDPRPAAPSRSSGASGWAVLLAVLALGGAGLAGWQAWETRARVGELRQELASRLN AGDTVAAEARALARQQQEAMAALQGRVGALAAQIEATEGQAAALEALYQEFSRSREDRVVAEVEQAVNVAAQQLQLAGNI EAALIALQGAEARLALQDKGQLAVLRRALAKDIEQLKLQPEVDVGGIALRLERLLERGDALPLAFESQPPANAEHGGEQA AAVEPGRLNVALAFITELGRDVWRELRSLVRVERLDQSEPVLLAPAQSTFLRENLKIRLLTARLALLARDGRTYAADLAQ ARSWMERFFDTRDERVREAIGELKALEAMSVGDERPALTESFAALRVLQTRAGEPRTPAVAAEPARPANGGRAPAPQR >Mature_398_residues MNEETPALTSSPAAAQPAASVEPPPSDPRPAAPSRSSGASGWAVLLAVLALGGAGLAGWQAWETRARVGELRQELASRLN AGDTVAAEARALARQQQEAMAALQGRVGALAAQIEATEGQAAALEALYQEFSRSREDRVVAEVEQAVNVAAQQLQLAGNI EAALIALQGAEARLALQDKGQLAVLRRALAKDIEQLKLQPEVDVGGIALRLERLLERGDALPLAFESQPPANAEHGGEQA AAVEPGRLNVALAFITELGRDVWRELRSLVRVERLDQSEPVLLAPAQSTFLRENLKIRLLTARLALLARDGRTYAADLAQ ARSWMERFFDTRDERVREAIGELKALEAMSVGDERPALTESFAALRVLQTRAGEPRTPAVAAEPARPANGGRAPAPQR
Specific function: Siroheme and cobalamin biosynthesis. [C]
COG id: COG2959
COG function: function code H; Uncharacterized enzyme of heme biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790235, Length=338, Percent_Identity=26.6272189349112, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007470 [H]
Pfam domain/function: PF04375 HemX [H]
EC number: =2.1.1.107 [H]
Molecular weight: Translated: 42486; Mature: 42486
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEETPALTSSPAAAQPAASVEPPPSDPRPAAPSRSSGASGWAVLLAVLALGGAGLAGWQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHH AWETRARVGELRQELASRLNAGDTVAAEARALARQQQEAMAALQGRVGALAAQIEATEGQ HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AAALEALYQEFSRSREDRVVAEVEQAVNVAAQQLQLAGNIEAALIALQGAEARLALQDKG HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCC QLAVLRRALAKDIEQLKLQPEVDVGGIALRLERLLERGDALPLAFESQPPANAEHGGEQA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC AAVEPGRLNVALAFITELGRDVWRELRSLVRVERLDQSEPVLLAPAQSTFLRENLKIRLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCEEHH TARLALLARDGRTYAADLAQARSWMERFFDTRDERVREAIGELKALEAMSVGDERPALTE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH SFAALRVLQTRAGEPRTPAVAAEPARPANGGRAPAPQR HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNEETPALTSSPAAAQPAASVEPPPSDPRPAAPSRSSGASGWAVLLAVLALGGAGLAGWQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHH AWETRARVGELRQELASRLNAGDTVAAEARALARQQQEAMAALQGRVGALAAQIEATEGQ HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AAALEALYQEFSRSREDRVVAEVEQAVNVAAQQLQLAGNIEAALIALQGAEARLALQDKG HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCC QLAVLRRALAKDIEQLKLQPEVDVGGIALRLERLLERGDALPLAFESQPPANAEHGGEQA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC AAVEPGRLNVALAFITELGRDVWRELRSLVRVERLDQSEPVLLAPAQSTFLRENLKIRLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCEEHH TARLALLARDGRTYAADLAQARSWMERFFDTRDERVREAIGELKALEAMSVGDERPALTE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH SFAALRVLQTRAGEPRTPAVAAEPARPANGGRAPAPQR HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3062586; 3054815; 1379743; 9278503; 9298646 [H]