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The map label for this gene is dadA1 [H]

Identifier: 119897258

GI number: 119897258

Start: 1038235

End: 1039485

Strand: Reverse

Name: dadA1 [H]

Synonym: azo0967

Alternate gene names: 119897258

Gene position: 1039485-1038235 (Counterclockwise)

Preceding gene: 119897270

Following gene: 119897256

Centisome position: 23.75

GC content: 70.34

Gene sequence:

>1251_bases
ATGCATGTGATGGTTCTCGGCGCCGGCGTCACCGGCGTCACCACCGCCTGGTATCTGCGCCAGGCGGGCTTCGAGGTCAG
CATCGTCGACCGTCAGCCAGCCCCCGGCATGGAAACCAGCTTCGCCAACGGCGGACAGATTTCGGTCAGCCATCCGGAGC
CGTGGGCCAATCCCTCCGCACCCTTGACGGTACTGCGCTGGCTGGGGCGCGAGGACGCGCCGCTGCGGTTTCGTCCTCAC
GCCCAGGCCGCGCAATGGCGATGGGCGCTGTCCTTCCTGCACGAATGCCTGCCCTGGCGCAGCCGCCGCAACACTGCGGC
CATTGCCGCGCTGGCGATGGACAGTGCCCGGCGCCTGCGCGAGCTTCGCGAGACGGCCGCCCTGCACTATGACCAGCGGC
AGCGCGGCATACTCCATTTGTTCTACAACCGCAGCAGCTTCGCCTCCGTGGCGGCGAGGGTGCGCGAACTGCAGCATTTC
GGGATGGATGTGCGCGCATGCTCGGCGGCCGAATGCGTAGCAATCGAGCCGGCGCTCGGTCACGTCGCATCCACGCTGCG
CGGCGGGCTCTACGCGCCGGACGACGAATCGGGCGACGCACATCTGTTCACCCAGGCGCTGGCGGAGCGCCTGCGCGAAG
ACGGCGTGCGCTTCCACCTCAATACGCGGATCGAACGCCTCTCGCAGACGGGCGGGCGGATCGACGGGGTGGAGGTGCGC
GACGAGGCCGGCCGCACCGGCATCCTGCTCGCTGATCATTACGTGCTGTGCCTTGGCAGCTACGGCACGGCACTGATGGC
GCGGCTGGGCGTGCGCCTGCCGATCTACCCGGTCAAGGGCTATTCGCTGACCGCAGCGGTGATCGCGCCGGAGCGGGCGC
CGGAAGTGAGCCTCACCGACGAATCCCGCCGCATCGTGTGCTCCCGCCTGGGTGACCGCCTGCGGGTCGCGGGCACCGCG
GAACTGGACGGCTTCAATACTGCGCTGCGTCCGGAGCGGGGGCGGATGCTGGCCGACTGGCTGAACAGCCGCTTCCCGGG
TGCGATCGACCCGGCGGCGGCGACGCTATGGGCCGGCCTGCGCCCCGCCACGCCCGGCAACGTACCGCTGATCGGCAAGA
GCCCGTTCGAGCGCCTCTGGTACAACACCGGCCACGGCACGCTCGGGTGGACGCTGGCCTGCGGTTCGGGCGCCGCCACT
GCCGACCTCATCGCCGGCCGGCGGCCGACGCCGCGTTTTCCGTTCCGCTGA

Upstream 100 bases:

>100_bases
CGCCCCAGGGTGGGCACGGGGCGTTATGATGACTGCCTTCCGCGGAACTCGCGCCTCTGTCTTTGCTCGTAGTGGAGCAC
TCCGACTAGACGACCCCCCT

Downstream 100 bases:

>100_bases
GTCTCGCTCGGCGGGAATCAGGCCGCCGCGCTGGGGGCGGGCGCCGAGGAGCACGCACACGGGCCGCTGGCAGCATCGCC
GCACCCCTCTTGGCGCCCTT

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MHVMVLGAGVTGVTTAWYLRQAGFEVSIVDRQPAPGMETSFANGGQISVSHPEPWANPSAPLTVLRWLGREDAPLRFRPH
AQAAQWRWALSFLHECLPWRSRRNTAAIAALAMDSARRLRELRETAALHYDQRQRGILHLFYNRSSFASVAARVRELQHF
GMDVRACSAAECVAIEPALGHVASTLRGGLYAPDDESGDAHLFTQALAERLREDGVRFHLNTRIERLSQTGGRIDGVEVR
DEAGRTGILLADHYVLCLGSYGTALMARLGVRLPIYPVKGYSLTAAVIAPERAPEVSLTDESRRIVCSRLGDRLRVAGTA
ELDGFNTALRPERGRMLADWLNSRFPGAIDPAAATLWAGLRPATPGNVPLIGKSPFERLWYNTGHGTLGWTLACGSGAAT
ADLIAGRRPTPRFPFR

Sequences:

>Translated_416_residues
MHVMVLGAGVTGVTTAWYLRQAGFEVSIVDRQPAPGMETSFANGGQISVSHPEPWANPSAPLTVLRWLGREDAPLRFRPH
AQAAQWRWALSFLHECLPWRSRRNTAAIAALAMDSARRLRELRETAALHYDQRQRGILHLFYNRSSFASVAARVRELQHF
GMDVRACSAAECVAIEPALGHVASTLRGGLYAPDDESGDAHLFTQALAERLREDGVRFHLNTRIERLSQTGGRIDGVEVR
DEAGRTGILLADHYVLCLGSYGTALMARLGVRLPIYPVKGYSLTAAVIAPERAPEVSLTDESRRIVCSRLGDRLRVAGTA
ELDGFNTALRPERGRMLADWLNSRFPGAIDPAAATLWAGLRPATPGNVPLIGKSPFERLWYNTGHGTLGWTLACGSGAAT
ADLIAGRRPTPRFPFR
>Mature_416_residues
MHVMVLGAGVTGVTTAWYLRQAGFEVSIVDRQPAPGMETSFANGGQISVSHPEPWANPSAPLTVLRWLGREDAPLRFRPH
AQAAQWRWALSFLHECLPWRSRRNTAAIAALAMDSARRLRELRETAALHYDQRQRGILHLFYNRSSFASVAARVRELQHF
GMDVRACSAAECVAIEPALGHVASTLRGGLYAPDDESGDAHLFTQALAERLREDGVRFHLNTRIERLSQTGGRIDGVEVR
DEAGRTGILLADHYVLCLGSYGTALMARLGVRLPIYPVKGYSLTAAVIAPERAPEVSLTDESRRIVCSRLGDRLRVAGTA
ELDGFNTALRPERGRMLADWLNSRFPGAIDPAAATLWAGLRPATPGNVPLIGKSPFERLWYNTGHGTLGWTLACGSGAAT
ADLIAGRRPTPRFPFR

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=416, Percent_Identity=40.3846153846154, Blast_Score=323, Evalue=1e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 45584; Mature: 45584

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVMVLGAGVTGVTTAWYLRQAGFEVSIVDRQPAPGMETSFANGGQISVSHPEPWANPSA
CEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
PLTVLRWLGREDAPLRFRPHAQAAQWRWALSFLHECLPWRSRRNTAAIAALAMDSARRLR
HHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
ELRETAALHYDQRQRGILHLFYNRSSFASVAARVRELQHFGMDVRACSAAECVAIEPALG
HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHH
HVASTLRGGLYAPDDESGDAHLFTQALAERLREDGVRFHLNTRIERLSQTGGRIDGVEVR
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCCEEEH
DEAGRTGILLADHYVLCLGSYGTALMARLGVRLPIYPVKGYSLTAAVIAPERAPEVSLTD
HCCCCCEEEEECCEEEEECCHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCEECC
ESRRIVCSRLGDRLRVAGTAELDGFNTALRPERGRMLADWLNSRFPGAIDPAAATLWAGL
CHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCC
RPATPGNVPLIGKSPFERLWYNTGHGTLGWTLACGSGAATADLIAGRRPTPRFPFR
CCCCCCCCEEECCCHHHHHHEECCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MHVMVLGAGVTGVTTAWYLRQAGFEVSIVDRQPAPGMETSFANGGQISVSHPEPWANPSA
CEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
PLTVLRWLGREDAPLRFRPHAQAAQWRWALSFLHECLPWRSRRNTAAIAALAMDSARRLR
HHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
ELRETAALHYDQRQRGILHLFYNRSSFASVAARVRELQHFGMDVRACSAAECVAIEPALG
HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHH
HVASTLRGGLYAPDDESGDAHLFTQALAERLREDGVRFHLNTRIERLSQTGGRIDGVEVR
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCCEEEH
DEAGRTGILLADHYVLCLGSYGTALMARLGVRLPIYPVKGYSLTAAVIAPERAPEVSLTD
HCCCCCEEEEECCEEEEECCHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCEECC
ESRRIVCSRLGDRLRVAGTAELDGFNTALRPERGRMLADWLNSRFPGAIDPAAATLWAGL
CHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCC
RPATPGNVPLIGKSPFERLWYNTGHGTLGWTLACGSGAATADLIAGRRPTPRFPFR
CCCCCCCCEEECCCHHHHHHEECCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA