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The map label for this gene is nhaR [H]

Identifier: 119897200

GI number: 119897200

Start: 973554

End: 974405

Strand: Reverse

Name: nhaR [H]

Synonym: azo0909

Alternate gene names: 119897200

Gene position: 974405-973554 (Counterclockwise)

Preceding gene: 119897204

Following gene: 119897199

Centisome position: 22.27

GC content: 68.19

Gene sequence:

>852_bases
GTGCGGGCCAGCGAGCGCTCCGGACTTGCACCGCAAACCCTGTCCGGGCAGATCGCGACGCTGGAAGCCTCGCTCGGCGT
GACGCTGTTCCGTCGCCAGGGGCGGGGGCTCGCCCTCACCGAAACCGGGCGCATGGTACTCGATTATGCCGAAGAGATTT
TCCGCCTGGGCGCCGAACTGGAGGACGCGCTGAGCAGCCGAGCGGCCGGGAGAGCGGTGCCGTTCCGTGTCGGCGTGGCG
GACGTGGTGCCGAAGGCGATCGCCTATGTGCTGCTCGCACCGTCGATGCATCTGCCGGAGCCAATGCGCATCGTCTGCCG
CGAAAACAAGCTCGATCAGTTGCTGGGCGAACTCGCCACCCACAAGCTCGACGTCGTACTGGCCGACAGCCCTCTGCCAC
CCAACATGGACGTACGGGGGTACAGCCACAAGCTGGGCGAATCTCCGCTCGGTTTCTTCGCCACCCCGGCGCTTGCCGCG
ACGCTGCAGGGTCCGTTTCCCGCCTGCCTCGACCGCGCACCGCTGCTGGTGCCGGGCACGGAAGCCGCGGTGCGAGGTCC
GCTGCTGCGCTGGCTGGAGACGCACAAGGTGCGACCGCGCATCGTCGGCGAATTCGACGACGCGGCGCTGATGCGTGCTT
TCGGAGAAGCGGGCGCGGGCGTTTTTCCCAGCGCGATGCTGATCCACGACGAGGTGTGTCGCCAGCACGGCGTGAGTTGC
CTGGGAACCGCCACTGAAGTCACCGAGTCCTTCTACGCCATCTCGGTGGAGCGGCGCCTGACGCACCCCGCGACGCGCGC
GATCAGCAGCGCATCGCCGCTGGCCGGAGAAGGCACCACAACGGAGGGCTAG

Upstream 100 bases:

>100_bases
CCGAGTTCAACAGAATTTCAATCCGTTTTTTTCGAATAAAACCGTGCTGAACTACAAGCAGCTTCACCACTTCTGGACCG
TCGCCCGCGCGGGCGGCGTC

Downstream 100 bases:

>100_bases
CGGGGCTGACGGACTGGAACTGCTAGAATGCGCGCCTTTTACGCACGCGGTGCAGTGGTGCCGGGAGTGGGACTCGAACC
CACACACCTTGCGGCGGCGG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Na(+)/H(+) antiporter regulatory protein [H]

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MRASERSGLAPQTLSGQIATLEASLGVTLFRRQGRGLALTETGRMVLDYAEEIFRLGAELEDALSSRAAGRAVPFRVGVA
DVVPKAIAYVLLAPSMHLPEPMRIVCRENKLDQLLGELATHKLDVVLADSPLPPNMDVRGYSHKLGESPLGFFATPALAA
TLQGPFPACLDRAPLLVPGTEAAVRGPLLRWLETHKVRPRIVGEFDDAALMRAFGEAGAGVFPSAMLIHDEVCRQHGVSC
LGTATEVTESFYAISVERRLTHPATRAISSASPLAGEGTTTEG

Sequences:

>Translated_283_residues
MRASERSGLAPQTLSGQIATLEASLGVTLFRRQGRGLALTETGRMVLDYAEEIFRLGAELEDALSSRAAGRAVPFRVGVA
DVVPKAIAYVLLAPSMHLPEPMRIVCRENKLDQLLGELATHKLDVVLADSPLPPNMDVRGYSHKLGESPLGFFATPALAA
TLQGPFPACLDRAPLLVPGTEAAVRGPLLRWLETHKVRPRIVGEFDDAALMRAFGEAGAGVFPSAMLIHDEVCRQHGVSC
LGTATEVTESFYAISVERRLTHPATRAISSASPLAGEGTTTEG
>Mature_283_residues
MRASERSGLAPQTLSGQIATLEASLGVTLFRRQGRGLALTETGRMVLDYAEEIFRLGAELEDALSSRAAGRAVPFRVGVA
DVVPKAIAYVLLAPSMHLPEPMRIVCRENKLDQLLGELATHKLDVVLADSPLPPNMDVRGYSHKLGESPLGFFATPALAA
TLQGPFPACLDRAPLLVPGTEAAVRGPLLRWLETHKVRPRIVGEFDDAALMRAFGEAGAGVFPSAMLIHDEVCRQHGVSC
LGTATEVTESFYAISVERRLTHPATRAISSASPLAGEGTTTEG

Specific function: Plays a role in the positive regulation of nhaA [H]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786202, Length=268, Percent_Identity=35.4477611940299, Blast_Score=168, Evalue=5e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 30187; Mature: 30187

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50931 HTH_LYSR ; PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASERSGLAPQTLSGQIATLEASLGVTLFRRQGRGLALTETGRMVLDYAEEIFRLGAEL
CCCCCCCCCCCCCCCCCEEEEEHHHCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHH
EDALSSRAAGRAVPFRVGVADVVPKAIAYVLLAPSMHLPEPMRIVCRENKLDQLLGELAT
HHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHH
HKLDVVLADSPLPPNMDVRGYSHKLGESPLGFFATPALAATLQGPFPACLDRAPLLVPGT
HHEEEEEECCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCEEECCC
EAAVRGPLLRWLETHKVRPRIVGEFDDAALMRAFGEAGAGVFPSAMLIHDEVCRQHGVSC
HHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCH
LGTATEVTESFYAISVERRLTHPATRAISSASPLAGEGTTTEG
HHHHHHHHHHHHEEEHHHHHCCHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRASERSGLAPQTLSGQIATLEASLGVTLFRRQGRGLALTETGRMVLDYAEEIFRLGAEL
CCCCCCCCCCCCCCCCCEEEEEHHHCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHH
EDALSSRAAGRAVPFRVGVADVVPKAIAYVLLAPSMHLPEPMRIVCRENKLDQLLGELAT
HHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHH
HKLDVVLADSPLPPNMDVRGYSHKLGESPLGFFATPALAATLQGPFPACLDRAPLLVPGT
HHEEEEEECCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCEEECCC
EAAVRGPLLRWLETHKVRPRIVGEFDDAALMRAFGEAGAGVFPSAMLIHDEVCRQHGVSC
HHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCH
LGTATEVTESFYAISVERRLTHPATRAISSASPLAGEGTTTEG
HHHHHHHHHHHHEEEHHHHHCCHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2429258; 1630901; 9278503; 3413113; 1316901; 8168494 [H]